RNA–Protein interactions for RNA: ENST00000461768.5

SRRM1-204, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-204ENST00000461768 NISCHQ9Y2I1 1504 aa20.35■□□□□ 0.85
SRRM1-204ENST00000461768 CCDC180Q9P1Z9 1646 aa18.05■□□□□ 0.48
SRRM1-204ENST00000461768 ABCC9O60706 1549 aa17.49■□□□□ 0.39
SRRM1-204ENST00000461768 ZCCHC6Q5VYS8 1495 aaKnown RBP16.99■□□□□ 0.31
SRRM1-204ENST00000461768 NACADO15069 1562 aa16.93■□□□□ 0.3
SRRM1-204ENST00000461768 RB1CC1Q8TDY2 1594 aa16.9■□□□□ 0.3
SRRM1-204ENST00000461768 MYO15BQ96JP2 1530 aa16.88■□□□□ 0.29
SRRM1-204ENST00000461768 DCAF8L2P0C7V8 631 aa16.88■□□□□ 0.29
SRRM1-204ENST00000461768 DCAF1Q9Y4B6 1507 aa16.86■□□□□ 0.29
SRRM1-204ENST00000461768 UNC13AQ9UPW8 1703 aa16.53■□□□□ 0.24
SRRM1-204ENST00000461768 SCRIBQ14160 1630 aa16.45■□□□□ 0.22
SRRM1-204ENST00000461768 BICRAQ9NZM4 1560 aa16.4■□□□□ 0.22
SRRM1-204ENST00000461768 PABPN1Q86U42 306 aaKnown RBP eCLIP16.34■□□□□ 0.21
SRRM1-204ENST00000461768 SHROOM4Q9ULL8 1493 aa16.24■□□□□ 0.19
SRRM1-204ENST00000461768 EIF4G1Q04637 1599 aaKnown RBP15.95■□□□□ 0.14
SRRM1-204ENST00000461768 DNAJC5BQ9UF47 199 aa15.92■□□□□ 0.14
SRRM1-204ENST00000461768 CC2D2AQ9P2K1 1620 aa15.84■□□□□ 0.13
SRRM1-204ENST00000461768 CECR2Q9BXF3 1484 aa15.83■□□□□ 0.12
SRRM1-204ENST00000461768 SMARCA4P51532 1647 aa15.76■□□□□ 0.11
SRRM1-204ENST00000461768 BAZ1AQ9NRL2 1556 aaPredicted RBP15.75■□□□□ 0.11
SRRM1-204ENST00000461768 MROH2BQ7Z745 1585 aa15.67■□□□□ 0.1
SRRM1-204ENST00000461768 ATAD2BQ9ULI0 1458 aa15.64■□□□□ 0.09
SRRM1-204ENST00000461768 SMARCA2P51531 1590 aa15.62■□□□□ 0.09
SRRM1-204ENST00000461768 PEG3Q9GZU2 1588 aa15.62■□□□□ 0.09
SRRM1-204ENST00000461768 NCAPD3P42695 1498 aa15.61■□□□□ 0.09
SRRM1-204ENST00000461768 HMGXB3Q12766 1538 aa15.56■□□□□ 0.08
SRRM1-204ENST00000461768 RSF1Q96T23 1441 aaPredicted RBP15.54■□□□□ 0.08
SRRM1-204ENST00000461768 WIZO95785 1651 aa15.51■□□□□ 0.07
SRRM1-204ENST00000461768 BAZ1BQ9UIG0 1483 aaKnown RBP15.51■□□□□ 0.07
SRRM1-204ENST00000461768 TOP2AP11388 1531 aaKnown RBP15.37■□□□□ 0.05
SRRM1-204ENST00000461768 SUPT5HO00267 1087 aaKnown RBP15.21■□□□□ 0.03
SRRM1-204ENST00000461768 CCDC88BA6NC98 1476 aa15.18■□□□□ 0.02
SRRM1-204ENST00000461768 NESP48681 1621 aa15.17■□□□□ 0.02
SRRM1-204ENST00000461768 LAMC3Q9Y6N6 1575 aa15.17■□□□□ 0.02
SRRM1-204ENST00000461768 CADPSQ9ULU8 1353 aa15.15■□□□□ 0.02
SRRM1-204ENST00000461768 CFTRP13569 1480 aa15.1■□□□□ 0.01
SRRM1-204ENST00000461768 ERCC6Q03468 1493 aa15.06■□□□□ 0
SRRM1-204ENST00000461768 PDS5BQ9NTI5 1447 aa15.05■□□□□ -0
SRRM1-204ENST00000461768 KIF21AQ7Z4S6 1674 aa15.02□□□□□ -0.01
SRRM1-204ENST00000461768 PRDM2Q13029 1718 aa15.01□□□□□ -0.01
SRRM1-204ENST00000461768 FANCD2Q9BXW9 1451 aa14.97□□□□□ -0.01
SRRM1-204ENST00000461768 CEP164Q9UPV0 1460 aa14.95□□□□□ -0.02
SRRM1-204ENST00000461768 THOC2Q8NI27 1593 aaKnown RBP14.94□□□□□ -0.02
SRRM1-204ENST00000461768 MRC2Q9UBG0 1479 aa14.9□□□□□ -0.02
SRRM1-204ENST00000461768 CUX2O14529 1486 aa14.87□□□□□ -0.03
SRRM1-204ENST00000461768 WDR62O43379 1518 aa14.87□□□□□ -0.03
SRRM1-204ENST00000461768 URB2Q14146 1524 aaKnown RBP14.82□□□□□ -0.04
SRRM1-204ENST00000461768 DNMBPQ6XZF7 1577 aa14.77□□□□□ -0.05
SRRM1-204ENST00000461768 TOPBP1Q92547 1522 aa14.76□□□□□ -0.05
SRRM1-204ENST00000461768 ABCC8Q09428 1581 aa14.76□□□□□ -0.05
SRRM1-204ENST00000461768 CUX1P39880 1505 aa14.71□□□□□ -0.06
SRRM1-204ENST00000461768 WRNQ14191 1432 aaPredicted RBP eCLIP14.65□□□□□ -0.06
SRRM1-204ENST00000461768 POLA1P09884 1462 aaPredicted RBP14.64□□□□□ -0.07
SRRM1-204ENST00000461768 IFT140Q96RY7 1462 aa14.63□□□□□ -0.07
SRRM1-204ENST00000461768 FGD5Q6ZNL6 1462 aa14.63□□□□□ -0.07
SRRM1-204ENST00000461768 BIVM-ERCC5R4GMW8 1640 aa14.63□□□□□ -0.07
SRRM1-204ENST00000461768 SYNJ1O43426 1573 aa14.62□□□□□ -0.07
SRRM1-204ENST00000461768 TOP2BQ02880 1626 aa14.62□□□□□ -0.07
SRRM1-204ENST00000461768 TARBP1Q13395 1621 aaKnown RBP14.6□□□□□ -0.07
SRRM1-204ENST00000461768 SOGA1O94964 1423 aa14.58□□□□□ -0.08
SRRM1-204ENST00000461768 RAD54L2Q9Y4B4 1467 aa14.57□□□□□ -0.08
SRRM1-204ENST00000461768 ZNF608Q9ULD9 1512 aaPredicted RBP14.55□□□□□ -0.08
SRRM1-204ENST00000461768 WDR97A6NE52 1622 aa14.52□□□□□ -0.08
SRRM1-204ENST00000461768 EIF4G3O43432 1585 aaKnown RBP14.51□□□□□ -0.09
SRRM1-204ENST00000461768 ABCA10Q8WWZ4 1543 aa14.51□□□□□ -0.09
SRRM1-204ENST00000461768 AQRO60306 1485 aaKnown RBP eCLIP14.48□□□□□ -0.092e-6■□□□□ 11.2
SRRM1-204ENST00000461768 TDRD9Q8NDG6 1382 aaKnown RBP14.47□□□□□ -0.09
SRRM1-204ENST00000461768 ABCA5Q8WWZ7 1642 aa14.44□□□□□ -0.1
SRRM1-204ENST00000461768 GAPVD1Q14C86 1478 aa14.41□□□□□ -0.1
SRRM1-204ENST00000461768 GRIN2BQ13224 1484 aa14.39□□□□□ -0.11
SRRM1-204ENST00000461768 PBRM1Q86U86 1689 aa14.39□□□□□ -0.11
SRRM1-204ENST00000461768 TRIM41Q8WV44 630 aa14.37□□□□□ -0.11
SRRM1-204ENST00000461768 SNAPC4Q5SXM2 1469 aa14.35□□□□□ -0.11
SRRM1-204ENST00000461768 MAGI1Q96QZ7 1491 aaPredicted RBP14.35□□□□□ -0.11
SRRM1-204ENST00000461768 ERICH3Q5RHP9 1530 aa14.33□□□□□ -0.12
SRRM1-204ENST00000461768 KIF27Q86VH2 1401 aa14.32□□□□□ -0.12
SRRM1-204ENST00000461768 CHIC1Q5VXU3 224 aa14.3□□□□□ -0.12
SRRM1-204ENST00000461768 CHD1O14646 1710 aa14.29□□□□□ -0.12
SRRM1-204ENST00000461768 SYNJ2O15056 1496 aa14.29□□□□□ -0.12
SRRM1-204ENST00000461768 ADAMTS12P58397 1594 aa14.29□□□□□ -0.12
SRRM1-204ENST00000461768 IGF1RP08069 1367 aa14.26□□□□□ -0.13
SRRM1-204ENST00000461768 FHAD1B1AJZ9 1412 aa14.25□□□□□ -0.13
SRRM1-204ENST00000461768 RUSC2Q8N2Y8 1516 aa14.25□□□□□ -0.13
SRRM1-204ENST00000461768 FBLN2P98095 1184 aa14.24□□□□□ -0.13
SRRM1-204ENST00000461768 OSCARQ8IYS5 282 aa14.24□□□□□ -0.13
SRRM1-204ENST00000461768 CHMP7Q8WUX9 453 aaPredicted RBP14.23□□□□□ -0.13
SRRM1-204ENST00000461768 DNAJC5Q9H3Z4 198 aa14.23□□□□□ -0.13
SRRM1-204ENST00000461768 CUL7Q14999 1698 aa14.23□□□□□ -0.13
SRRM1-204ENST00000461768 GRIN2AQ12879 1464 aa14.21□□□□□ -0.13
SRRM1-204ENST00000461768 CARMIL1Q5VZK9 1371 aa14.17□□□□□ -0.14
SRRM1-204ENST00000461768 NUP160Q12769 1436 aa14.15□□□□□ -0.14
SRRM1-204ENST00000461768 CLASP1Q7Z460 1538 aa14.15□□□□□ -0.14
SRRM1-204ENST00000461768 EEA1Q15075 1411 aa14.15□□□□□ -0.14
SRRM1-204ENST00000461768 CEP170Q5SW79 1584 aa14.14□□□□□ -0.15
SRRM1-204ENST00000461768 PRXQ9BXM0 1461 aa14.11□□□□□ -0.15
SRRM1-204ENST00000461768 RAPGEF2Q9Y4G8 1499 aa14.11□□□□□ -0.15
SRRM1-204ENST00000461768 CSRNP3Q8WYN3 585 aa14.09□□□□□ -0.15
SRRM1-204ENST00000461768 FAM9AQ8IZU1 332 aaPredicted RBP14.05□□□□□ -0.16
SRRM1-204ENST00000461768 ARHGEF11O15085 1522 aa14.05□□□□□ -0.16
SRRM1-204ENST00000461768 KIAA0586Q9BVV6 1533 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms