RNA–Protein interactions for RNA: ENST00000461539.5

C9orf78-203, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-203ENST00000461539 NISCHQ9Y2I1 1504 aa22.8■■□□□ 1.24
C9orf78-203ENST00000461539 CCDC180Q9P1Z9 1646 aa19.93■□□□□ 0.78
C9orf78-203ENST00000461539 ABCC9O60706 1549 aa19.38■□□□□ 0.69
C9orf78-203ENST00000461539 DCAF8L2P0C7V8 631 aa19.11■□□□□ 0.65
C9orf78-203ENST00000461539 ZCCHC6Q5VYS8 1495 aaKnown RBP19.06■□□□□ 0.64
C9orf78-203ENST00000461539 DCAF1Q9Y4B6 1507 aa18.83■□□□□ 0.6
C9orf78-203ENST00000461539 NACADO15069 1562 aa18.77■□□□□ 0.6
C9orf78-203ENST00000461539 MYO15BQ96JP2 1530 aa18.76■□□□□ 0.59
C9orf78-203ENST00000461539 RB1CC1Q8TDY2 1594 aa18.69■□□□□ 0.58
C9orf78-203ENST00000461539 SHROOM4Q9ULL8 1493 aa18.4■□□□□ 0.54
C9orf78-203ENST00000461539 SCRIBQ14160 1630 aa18.35■□□□□ 0.53
C9orf78-203ENST00000461539 PABPN1Q86U42 306 aaKnown RBP eCLIP18.27■□□□□ 0.52
C9orf78-203ENST00000461539 BICRAQ9NZM4 1560 aa18.09■□□□□ 0.49
C9orf78-203ENST00000461539 UNC13AQ9UPW8 1703 aa18.05■□□□□ 0.48
C9orf78-203ENST00000461539 CECR2Q9BXF3 1484 aa17.77■□□□□ 0.44
C9orf78-203ENST00000461539 BAZ1AQ9NRL2 1556 aaPredicted RBP17.62■□□□□ 0.41
C9orf78-203ENST00000461539 EIF4G1Q04637 1599 aaKnown RBP17.62■□□□□ 0.41
C9orf78-203ENST00000461539 MROH2BQ7Z745 1585 aa17.59■□□□□ 0.41
C9orf78-203ENST00000461539 RSF1Q96T23 1441 aaPredicted RBP17.57■□□□□ 0.4
C9orf78-203ENST00000461539 SUPT5HO00267 1087 aaKnown RBP17.55■□□□□ 0.4
C9orf78-203ENST00000461539 SMARCA4P51532 1647 aa17.54■□□□□ 0.4
C9orf78-203ENST00000461539 DNAJC5BQ9UF47 199 aa17.49■□□□□ 0.39
C9orf78-203ENST00000461539 ATAD2BQ9ULI0 1458 aa17.45■□□□□ 0.38
C9orf78-203ENST00000461539 CC2D2AQ9P2K1 1620 aa17.43■□□□□ 0.38
C9orf78-203ENST00000461539 SMARCA2P51531 1590 aa17.4■□□□□ 0.38
C9orf78-203ENST00000461539 NCAPD3P42695 1498 aa17.38■□□□□ 0.37
C9orf78-203ENST00000461539 PEG3Q9GZU2 1588 aa17.35■□□□□ 0.37
C9orf78-203ENST00000461539 WIZO95785 1651 aa17.34■□□□□ 0.37
C9orf78-203ENST00000461539 BAZ1BQ9UIG0 1483 aaKnown RBP17.33■□□□□ 0.37
C9orf78-203ENST00000461539 HMGXB3Q12766 1538 aa17.26■□□□□ 0.35
C9orf78-203ENST00000461539 TOP2AP11388 1531 aaKnown RBP17.22■□□□□ 0.35
C9orf78-203ENST00000461539 CCDC88BA6NC98 1476 aa17.08■□□□□ 0.32
C9orf78-203ENST00000461539 CADPSQ9ULU8 1353 aa16.94■□□□□ 0.3
C9orf78-203ENST00000461539 CFTRP13569 1480 aa16.87■□□□□ 0.29
C9orf78-203ENST00000461539 NESP48681 1621 aa16.85■□□□□ 0.29
C9orf78-203ENST00000461539 LAMC3Q9Y6N6 1575 aa16.78■□□□□ 0.28
C9orf78-203ENST00000461539 PDS5BQ9NTI5 1447 aa16.78■□□□□ 0.28
C9orf78-203ENST00000461539 FANCD2Q9BXW9 1451 aa16.72■□□□□ 0.27
C9orf78-203ENST00000461539 ERCC6Q03468 1493 aa16.69■□□□□ 0.26
C9orf78-203ENST00000461539 CEP164Q9UPV0 1460 aa16.65■□□□□ 0.26
C9orf78-203ENST00000461539 WRNQ14191 1432 aaPredicted RBP eCLIP16.57■□□□□ 0.24
C9orf78-203ENST00000461539 CHIC1Q5VXU3 224 aa16.55■□□□□ 0.24
C9orf78-203ENST00000461539 MRC2Q9UBG0 1479 aa16.54■□□□□ 0.24
C9orf78-203ENST00000461539 ABCC8Q09428 1581 aa16.54■□□□□ 0.24
C9orf78-203ENST00000461539 TRIM41Q8WV44 630 aa16.52■□□□□ 0.24
C9orf78-203ENST00000461539 URB2Q14146 1524 aaKnown RBP16.5■□□□□ 0.23
C9orf78-203ENST00000461539 KIF21AQ7Z4S6 1674 aa16.49■□□□□ 0.23
C9orf78-203ENST00000461539 CUX1P39880 1505 aa16.47■□□□□ 0.23
C9orf78-203ENST00000461539 PRDM2Q13029 1718 aa16.47■□□□□ 0.23
C9orf78-203ENST00000461539 TOPBP1Q92547 1522 aa16.46■□□□□ 0.23
C9orf78-203ENST00000461539 DNMBPQ6XZF7 1577 aa16.43■□□□□ 0.22
C9orf78-203ENST00000461539 WDR62O43379 1518 aa16.42■□□□□ 0.22
C9orf78-203ENST00000461539 SYNJ1O43426 1573 aa16.41■□□□□ 0.22
C9orf78-203ENST00000461539 THOC2Q8NI27 1593 aaKnown RBP16.39■□□□□ 0.21
C9orf78-203ENST00000461539 FGD5Q6ZNL6 1462 aa16.38■□□□□ 0.21
C9orf78-203ENST00000461539 TOP2BQ02880 1626 aa16.37■□□□□ 0.21
C9orf78-203ENST00000461539 POLA1P09884 1462 aaPredicted RBP16.36■□□□□ 0.21
C9orf78-203ENST00000461539 SOGA1O94964 1423 aa16.36■□□□□ 0.21
C9orf78-203ENST00000461539 RAD54L2Q9Y4B4 1467 aa16.33■□□□□ 0.2
C9orf78-203ENST00000461539 BIVM-ERCC5R4GMW8 1640 aa16.31■□□□□ 0.2
C9orf78-203ENST00000461539 CUX2O14529 1486 aa16.31■□□□□ 0.2
C9orf78-203ENST00000461539 IFT140Q96RY7 1462 aa16.29■□□□□ 0.2
C9orf78-203ENST00000461539 TDRD9Q8NDG6 1382 aaKnown RBP16.25■□□□□ 0.19
C9orf78-203ENST00000461539 ABCA10Q8WWZ4 1543 aa16.23■□□□□ 0.19
C9orf78-203ENST00000461539 FAM9AQ8IZU1 332 aaPredicted RBP16.22■□□□□ 0.19
C9orf78-203ENST00000461539 KIF27Q86VH2 1401 aa16.2■□□□□ 0.18
C9orf78-203ENST00000461539 ZNF608Q9ULD9 1512 aaPredicted RBP16.19■□□□□ 0.18
C9orf78-203ENST00000461539 AQRO60306 1485 aaKnown RBP eCLIP16.18■□□□□ 0.182e-8■■■■□ 20.4
C9orf78-203ENST00000461539 TARBP1Q13395 1621 aaKnown RBP16.17■□□□□ 0.18
C9orf78-203ENST00000461539 RUSC2Q8N2Y8 1516 aa16.14■□□□□ 0.18
C9orf78-203ENST00000461539 GAPVD1Q14C86 1478 aa16.14■□□□□ 0.17
C9orf78-203ENST00000461539 EEA1Q15075 1411 aa16.12■□□□□ 0.17
C9orf78-203ENST00000461539 CSRNP3Q8WYN3 585 aa16.12■□□□□ 0.17
C9orf78-203ENST00000461539 IGF1RP08069 1367 aa16.11■□□□□ 0.17
C9orf78-203ENST00000461539 GRIN2BQ13224 1484 aa16.09■□□□□ 0.17
C9orf78-203ENST00000461539 WDR97A6NE52 1622 aa16.05■□□□□ 0.16
C9orf78-203ENST00000461539 ABCA5Q8WWZ7 1642 aa16.04■□□□□ 0.16
C9orf78-203ENST00000461539 EIF4G3O43432 1585 aaKnown RBP16.04■□□□□ 0.16
C9orf78-203ENST00000461539 CARMIL1Q5VZK9 1371 aa16.02■□□□□ 0.16
C9orf78-203ENST00000461539 SNAPC4Q5SXM2 1469 aa16.02■□□□□ 0.15
C9orf78-203ENST00000461539 FBLN2P98095 1184 aa16.01■□□□□ 0.15
C9orf78-203ENST00000461539 EHMT2Q96KQ7 1210 aa16.01■□□□□ 0.15
C9orf78-203ENST00000461539 ERICH3Q5RHP9 1530 aa16■□□□□ 0.15
C9orf78-203ENST00000461539 CHMP7Q8WUX9 453 aaPredicted RBP16■□□□□ 0.15
C9orf78-203ENST00000461539 FHAD1B1AJZ9 1412 aa15.98■□□□□ 0.15
C9orf78-203ENST00000461539 MAGI1Q96QZ7 1491 aaPredicted RBP15.97■□□□□ 0.15
C9orf78-203ENST00000461539 PRXQ9BXM0 1461 aa15.96■□□□□ 0.14
C9orf78-203ENST00000461539 RAPGEF2Q9Y4G8 1499 aa15.93■□□□□ 0.14
C9orf78-203ENST00000461539 SYNJ2O15056 1496 aa15.92■□□□□ 0.14
C9orf78-203ENST00000461539 LOC105371045A0A1W2PR82 267 aa15.91■□□□□ 0.14
C9orf78-203ENST00000461539 UBTFP17480 764 aaKnown RBP15.91■□□□□ 0.14
C9orf78-203ENST00000461539 ADAMTS12P58397 1594 aa15.89■□□□□ 0.13
C9orf78-203ENST00000461539 PBRM1Q86U86 1689 aa15.88■□□□□ 0.13
C9orf78-203ENST00000461539 GOLGA3Q08378 1498 aa15.87■□□□□ 0.13
C9orf78-203ENST00000461539 CUL7Q14999 1698 aa15.86■□□□□ 0.13
C9orf78-203ENST00000461539 GRIN2AQ12879 1464 aa15.86■□□□□ 0.13
C9orf78-203ENST00000461539 KIF21BO75037 1637 aa15.82■□□□□ 0.12
C9orf78-203ENST00000461539 OSCARQ8IYS5 282 aa15.81■□□□□ 0.12
C9orf78-203ENST00000461539 NUP160Q12769 1436 aa15.78■□□□□ 0.12
C9orf78-203ENST00000461539 RANGAP1P46060 587 aaPredicted RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms