RNA–Protein interactions for RNA: ENST00000461379.5

GAPVD1-210, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 4

Gene GAPVD1, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-210ENST00000461379 NISCHQ9Y2I1 1504 aa38.44■■■■□ 3.74
GAPVD1-210ENST00000461379 CCDC180Q9P1Z9 1646 aa33.94■■■■□ 3.02
GAPVD1-210ENST00000461379 ABCC9O60706 1549 aa33.16■■■□□ 2.9
GAPVD1-210ENST00000461379 DCAF8L2P0C7V8 631 aa32.16■■■□□ 2.74
GAPVD1-210ENST00000461379 ZCCHC6Q5VYS8 1495 aaKnown RBP32.06■■■□□ 2.72
GAPVD1-210ENST00000461379 NACADO15069 1562 aa31.94■■■□□ 2.7
GAPVD1-210ENST00000461379 RB1CC1Q8TDY2 1594 aa31.91■■■□□ 2.7
GAPVD1-210ENST00000461379 MYO15BQ96JP2 1530 aa31.84■■■□□ 2.69
GAPVD1-210ENST00000461379 DCAF1Q9Y4B6 1507 aa31.79■■■□□ 2.68
GAPVD1-210ENST00000461379 PABPN1Q86U42 306 aaKnown RBP eCLIP31.11■■■□□ 2.57
GAPVD1-210ENST00000461379 SCRIBQ14160 1630 aa31.08■■■□□ 2.57
GAPVD1-210ENST00000461379 UNC13AQ9UPW8 1703 aa31.04■■■□□ 2.56
GAPVD1-210ENST00000461379 BICRAQ9NZM4 1560 aa30.96■■■□□ 2.55
GAPVD1-210ENST00000461379 SHROOM4Q9ULL8 1493 aa30.63■■■□□ 2.49
GAPVD1-210ENST00000461379 DNAJC5BQ9UF47 199 aa30.31■■■□□ 2.44
GAPVD1-210ENST00000461379 EIF4G1Q04637 1599 aaKnown RBP30.12■■■□□ 2.41
GAPVD1-210ENST00000461379 CECR2Q9BXF3 1484 aa29.97■■■□□ 2.39
GAPVD1-210ENST00000461379 CC2D2AQ9P2K1 1620 aa29.93■■■□□ 2.38
GAPVD1-210ENST00000461379 BAZ1AQ9NRL2 1556 aaPredicted RBP29.75■■■□□ 2.35
GAPVD1-210ENST00000461379 SMARCA4P51532 1647 aa29.73■■■□□ 2.35
GAPVD1-210ENST00000461379 MROH2BQ7Z745 1585 aa29.64■■■□□ 2.34
GAPVD1-210ENST00000461379 ATAD2BQ9ULI0 1458 aa29.59■■■□□ 2.33
GAPVD1-210ENST00000461379 NCAPD3P42695 1498 aa29.55■■■□□ 2.32
GAPVD1-210ENST00000461379 SMARCA2P51531 1590 aa29.52■■■□□ 2.32
GAPVD1-210ENST00000461379 PEG3Q9GZU2 1588 aa29.43■■■□□ 2.3
GAPVD1-210ENST00000461379 RSF1Q96T23 1441 aaPredicted RBP29.43■■■□□ 2.3
GAPVD1-210ENST00000461379 HMGXB3Q12766 1538 aa29.35■■■□□ 2.29
GAPVD1-210ENST00000461379 BAZ1BQ9UIG0 1483 aaKnown RBP29.34■■■□□ 2.29
GAPVD1-210ENST00000461379 WIZO95785 1651 aa29.27■■■□□ 2.28
GAPVD1-210ENST00000461379 TOP2AP11388 1531 aaKnown RBP29■■■□□ 2.23
GAPVD1-210ENST00000461379 SUPT5HO00267 1087 aaKnown RBP28.92■■■□□ 2.22
GAPVD1-210ENST00000461379 NESP48681 1621 aa28.76■■■□□ 2.19
GAPVD1-210ENST00000461379 CCDC88BA6NC98 1476 aa28.72■■■□□ 2.19
GAPVD1-210ENST00000461379 CADPSQ9ULU8 1353 aa28.72■■■□□ 2.19
GAPVD1-210ENST00000461379 LAMC3Q9Y6N6 1575 aa28.64■■■□□ 2.18
GAPVD1-210ENST00000461379 CFTRP13569 1480 aa28.57■■■□□ 2.16
GAPVD1-210ENST00000461379 ERCC6Q03468 1493 aa28.55■■■□□ 2.16
GAPVD1-210ENST00000461379 PDS5BQ9NTI5 1447 aa28.52■■■□□ 2.16
GAPVD1-210ENST00000461379 FANCD2Q9BXW9 1451 aa28.35■■■□□ 2.13
GAPVD1-210ENST00000461379 CEP164Q9UPV0 1460 aa28.28■■■□□ 2.12
GAPVD1-210ENST00000461379 KIF21AQ7Z4S6 1674 aa28.28■■■□□ 2.12
GAPVD1-210ENST00000461379 MRC2Q9UBG0 1479 aa28.2■■■□□ 2.1
GAPVD1-210ENST00000461379 THOC2Q8NI27 1593 aaKnown RBP28.18■■■□□ 2.1
GAPVD1-210ENST00000461379 CUX2O14529 1486 aa28.15■■■□□ 2.1
GAPVD1-210ENST00000461379 PRDM2Q13029 1718 aa28.11■■■□□ 2.09
GAPVD1-210ENST00000461379 WDR62O43379 1518 aa28.07■■■□□ 2.08
GAPVD1-210ENST00000461379 URB2Q14146 1524 aaKnown RBP28.05■■■□□ 2.08
GAPVD1-210ENST00000461379 TOPBP1Q92547 1522 aa27.91■■■□□ 2.06
GAPVD1-210ENST00000461379 ABCC8Q09428 1581 aa27.9■■■□□ 2.06
GAPVD1-210ENST00000461379 DNMBPQ6XZF7 1577 aa27.86■■■□□ 2.05
GAPVD1-210ENST00000461379 DNAJC5Q9H3Z4 198 aa27.85■■■□□ 2.05
GAPVD1-210ENST00000461379 CUX1P39880 1505 aa27.79■■■□□ 2.04
GAPVD1-210ENST00000461379 WRNQ14191 1432 aaPredicted RBP eCLIP27.73■■■□□ 2.03
GAPVD1-210ENST00000461379 POLA1P09884 1462 aaPredicted RBP27.7■■■□□ 2.02
GAPVD1-210ENST00000461379 IFT140Q96RY7 1462 aa27.69■■■□□ 2.02
GAPVD1-210ENST00000461379 FGD5Q6ZNL6 1462 aa27.67■■■□□ 2.02
GAPVD1-210ENST00000461379 SOGA1O94964 1423 aa27.63■■■□□ 2.01
GAPVD1-210ENST00000461379 RAD54L2Q9Y4B4 1467 aa27.61■■■□□ 2.01
GAPVD1-210ENST00000461379 SYNJ1O43426 1573 aa27.58■■■□□ 2.01
GAPVD1-210ENST00000461379 TOP2BQ02880 1626 aa27.56■■■□□ 2
GAPVD1-210ENST00000461379 ZNF608Q9ULD9 1512 aaPredicted RBP27.56■■■□□ 2
GAPVD1-210ENST00000461379 TARBP1Q13395 1621 aaKnown RBP27.54■■■□□ 2
GAPVD1-210ENST00000461379 BIVM-ERCC5R4GMW8 1640 aa27.51■■□□□ 1.99
GAPVD1-210ENST00000461379 TDRD9Q8NDG6 1382 aaKnown RBP27.48■■□□□ 1.99
GAPVD1-210ENST00000461379 AQRO60306 1485 aaKnown RBP eCLIP27.46■■□□□ 1.992e-6■■■■■ 34.3
GAPVD1-210ENST00000461379 ABCA10Q8WWZ4 1543 aa27.41■■□□□ 1.98
GAPVD1-210ENST00000461379 EIF4G3O43432 1585 aaKnown RBP27.37■■□□□ 1.97
GAPVD1-210ENST00000461379 WDR97A6NE52 1622 aa27.3■■□□□ 1.96
GAPVD1-210ENST00000461379 TRIM41Q8WV44 630 aa27.29■■□□□ 1.96
GAPVD1-210ENST00000461379 GAPVD1Q14C86 1478 aa27.29■■□□□ 1.96
GAPVD1-210ENST00000461379 GRIN2BQ13224 1484 aa27.25■■□□□ 1.95
GAPVD1-210ENST00000461379 ABCA5Q8WWZ7 1642 aa27.2■■□□□ 1.95
GAPVD1-210ENST00000461379 SNAPC4Q5SXM2 1469 aa27.18■■□□□ 1.94
GAPVD1-210ENST00000461379 KIF27Q86VH2 1401 aa27.14■■□□□ 1.93
GAPVD1-210ENST00000461379 FBLN2P98095 1184 aa27.13■■□□□ 1.93
GAPVD1-210ENST00000461379 MAGI1Q96QZ7 1491 aaPredicted RBP27.13■■□□□ 1.93
GAPVD1-210ENST00000461379 CHIC1Q5VXU3 224 aa27.12■■□□□ 1.93
GAPVD1-210ENST00000461379 OSCARQ8IYS5 282 aa27.11■■□□□ 1.93
GAPVD1-210ENST00000461379 CHMP7Q8WUX9 453 aaPredicted RBP27.08■■□□□ 1.93
GAPVD1-210ENST00000461379 ERICH3Q5RHP9 1530 aa27.06■■□□□ 1.92
GAPVD1-210ENST00000461379 PBRM1Q86U86 1689 aa27.05■■□□□ 1.92
GAPVD1-210ENST00000461379 IGF1RP08069 1367 aa27.04■■□□□ 1.92
GAPVD1-210ENST00000461379 SYNJ2O15056 1496 aa27.04■■□□□ 1.92
GAPVD1-210ENST00000461379 FHAD1B1AJZ9 1412 aa26.99■■□□□ 1.91
GAPVD1-210ENST00000461379 RUSC2Q8N2Y8 1516 aa26.96■■□□□ 1.91
GAPVD1-210ENST00000461379 ADAMTS12P58397 1594 aa26.94■■□□□ 1.9
GAPVD1-210ENST00000461379 CHD1O14646 1710 aa26.91■■□□□ 1.9
GAPVD1-210ENST00000461379 GRIN2AQ12879 1464 aa26.89■■□□□ 1.9
GAPVD1-210ENST00000461379 CARMIL1Q5VZK9 1371 aa26.87■■□□□ 1.89
GAPVD1-210ENST00000461379 CUL7Q14999 1698 aa26.79■■□□□ 1.88
GAPVD1-210ENST00000461379 NUP160Q12769 1436 aa26.78■■□□□ 1.88
GAPVD1-210ENST00000461379 FAM9AQ8IZU1 332 aaPredicted RBP26.75■■□□□ 1.87
GAPVD1-210ENST00000461379 CSRNP3Q8WYN3 585 aa26.75■■□□□ 1.87
GAPVD1-210ENST00000461379 EEA1Q15075 1411 aa26.74■■□□□ 1.87
GAPVD1-210ENST00000461379 CLASP1Q7Z460 1538 aa26.73■■□□□ 1.87
GAPVD1-210ENST00000461379 CEP170Q5SW79 1584 aa26.71■■□□□ 1.87
GAPVD1-210ENST00000461379 RAPGEF2Q9Y4G8 1499 aa26.69■■□□□ 1.86
GAPVD1-210ENST00000461379 PRXQ9BXM0 1461 aa26.67■■□□□ 1.86
GAPVD1-210ENST00000461379 ARHGEF11O15085 1522 aa26.59■■□□□ 1.85
GAPVD1-210ENST00000461379 KIAA0586Q9BVV6 1533 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms