RNA–Protein interactions for RNA: ENST00000461073.5

SKIV2L-202, Transcript of Ski2 like RNA helicase, humanhuman

TSL 2

Gene SKIV2L, Length 1,157 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-202ENST00000461073 NISCHQ9Y2I1 1504 aa35.6■■■■□ 3.29
SKIV2L-202ENST00000461073 CCDC180Q9P1Z9 1646 aa31.5■■■□□ 2.63
SKIV2L-202ENST00000461073 ABCC9O60706 1549 aa30.48■■■□□ 2.47
SKIV2L-202ENST00000461073 DCAF8L2P0C7V8 631 aa29.81■■■□□ 2.36
SKIV2L-202ENST00000461073 ZCCHC6Q5VYS8 1495 aaKnown RBP29.71■■■□□ 2.35
SKIV2L-202ENST00000461073 NACADO15069 1562 aa29.56■■■□□ 2.32
SKIV2L-202ENST00000461073 RB1CC1Q8TDY2 1594 aa29.52■■■□□ 2.32
SKIV2L-202ENST00000461073 DCAF1Q9Y4B6 1507 aa29.46■■■□□ 2.31
SKIV2L-202ENST00000461073 MYO15BQ96JP2 1530 aa29.45■■■□□ 2.3
SKIV2L-202ENST00000461073 SCRIBQ14160 1630 aa28.8■■■□□ 2.2
SKIV2L-202ENST00000461073 UNC13AQ9UPW8 1703 aa28.74■■■□□ 2.19
SKIV2L-202ENST00000461073 DNAJC5BQ9UF47 199 aa28.6■■■□□ 2.17
SKIV2L-202ENST00000461073 PABPN1Q86U42 306 aaKnown RBP eCLIP28.57■■■□□ 2.16
SKIV2L-202ENST00000461073 BICRAQ9NZM4 1560 aa28.46■■■□□ 2.15
SKIV2L-202ENST00000461073 SHROOM4Q9ULL8 1493 aa28.45■■■□□ 2.14
SKIV2L-202ENST00000461073 EIF4G1Q04637 1599 aaKnown RBP27.77■■■□□ 2.04
SKIV2L-202ENST00000461073 CECR2Q9BXF3 1484 aa27.65■■■□□ 2.02
SKIV2L-202ENST00000461073 BAZ1AQ9NRL2 1556 aaPredicted RBP27.62■■■□□ 2.01
SKIV2L-202ENST00000461073 CC2D2AQ9P2K1 1620 aa27.56■■■□□ 2
SKIV2L-202ENST00000461073 SMARCA4P51532 1647 aa27.55■■■□□ 2
SKIV2L-202ENST00000461073 MROH2BQ7Z745 1585 aa27.42■■□□□ 1.98
SKIV2L-202ENST00000461073 SMARCA2P51531 1590 aa27.35■■□□□ 1.97
SKIV2L-202ENST00000461073 ATAD2BQ9ULI0 1458 aa27.3■■□□□ 1.96
SKIV2L-202ENST00000461073 RSF1Q96T23 1441 aaPredicted RBP27.25■■□□□ 1.95
SKIV2L-202ENST00000461073 NCAPD3P42695 1498 aa27.23■■□□□ 1.95
SKIV2L-202ENST00000461073 PEG3Q9GZU2 1588 aa27.22■■□□□ 1.95
SKIV2L-202ENST00000461073 WIZO95785 1651 aa27.17■■□□□ 1.94
SKIV2L-202ENST00000461073 BAZ1BQ9UIG0 1483 aaKnown RBP27.17■■□□□ 1.94
SKIV2L-202ENST00000461073 HMGXB3Q12766 1538 aa27.13■■□□□ 1.93
SKIV2L-202ENST00000461073 SUPT5HO00267 1087 aaKnown RBP27.02■■□□□ 1.92
SKIV2L-202ENST00000461073 TOP2AP11388 1531 aaKnown RBP26.92■■□□□ 1.9
SKIV2L-202ENST00000461073 CCDC88BA6NC98 1476 aa26.6■■□□□ 1.85
SKIV2L-202ENST00000461073 LAMC3Q9Y6N6 1575 aa26.5■■□□□ 1.83
SKIV2L-202ENST00000461073 CADPSQ9ULU8 1353 aa26.49■■□□□ 1.83
SKIV2L-202ENST00000461073 NESP48681 1621 aa26.43■■□□□ 1.82
SKIV2L-202ENST00000461073 CFTRP13569 1480 aa26.37■■□□□ 1.81
SKIV2L-202ENST00000461073 PDS5BQ9NTI5 1447 aa26.36■■□□□ 1.81
SKIV2L-202ENST00000461073 ERCC6Q03468 1493 aa26.35■■□□□ 1.81
SKIV2L-202ENST00000461073 DNAJC5Q9H3Z4 198 aa26.32■■□□□ 1.8
SKIV2L-202ENST00000461073 PRDM2Q13029 1718 aa26.24■■□□□ 1.79
SKIV2L-202ENST00000461073 FANCD2Q9BXW9 1451 aa26.2■■□□□ 1.78
SKIV2L-202ENST00000461073 CEP164Q9UPV0 1460 aa26.17■■□□□ 1.78
SKIV2L-202ENST00000461073 KIF21AQ7Z4S6 1674 aa26.15■■□□□ 1.78
SKIV2L-202ENST00000461073 MRC2Q9UBG0 1479 aa26.02■■□□□ 1.76
SKIV2L-202ENST00000461073 CUX2O14529 1486 aa25.94■■□□□ 1.74
SKIV2L-202ENST00000461073 THOC2Q8NI27 1593 aaKnown RBP25.94■■□□□ 1.74
SKIV2L-202ENST00000461073 ABCC8Q09428 1581 aa25.91■■□□□ 1.74
SKIV2L-202ENST00000461073 WDR62O43379 1518 aa25.86■■□□□ 1.73
SKIV2L-202ENST00000461073 URB2Q14146 1524 aaKnown RBP25.84■■□□□ 1.73
SKIV2L-202ENST00000461073 DNMBPQ6XZF7 1577 aa25.81■■□□□ 1.72
SKIV2L-202ENST00000461073 TOPBP1Q92547 1522 aa25.79■■□□□ 1.72
SKIV2L-202ENST00000461073 WRNQ14191 1432 aaPredicted RBP eCLIP25.77■■□□□ 1.72
SKIV2L-202ENST00000461073 CUX1P39880 1505 aa25.71■■□□□ 1.71
SKIV2L-202ENST00000461073 TOP2BQ02880 1626 aa25.62■■□□□ 1.69
SKIV2L-202ENST00000461073 FGD5Q6ZNL6 1462 aa25.6■■□□□ 1.69
SKIV2L-202ENST00000461073 BIVM-ERCC5R4GMW8 1640 aa25.6■■□□□ 1.69
SKIV2L-202ENST00000461073 SYNJ1O43426 1573 aa25.6■■□□□ 1.69
SKIV2L-202ENST00000461073 POLA1P09884 1462 aaPredicted RBP25.59■■□□□ 1.69
SKIV2L-202ENST00000461073 IFT140Q96RY7 1462 aa25.58■■□□□ 1.69
SKIV2L-202ENST00000461073 SOGA1O94964 1423 aa25.57■■□□□ 1.68
SKIV2L-202ENST00000461073 TRIM41Q8WV44 630 aa25.53■■□□□ 1.68
SKIV2L-202ENST00000461073 RAD54L2Q9Y4B4 1467 aa25.47■■□□□ 1.67
SKIV2L-202ENST00000461073 TARBP1Q13395 1621 aaKnown RBP25.43■■□□□ 1.66
SKIV2L-202ENST00000461073 ABCA10Q8WWZ4 1543 aa25.36■■□□□ 1.65
SKIV2L-202ENST00000461073 TDRD9Q8NDG6 1382 aaKnown RBP25.35■■□□□ 1.65
SKIV2L-202ENST00000461073 CHIC1Q5VXU3 224 aa25.35■■□□□ 1.65
SKIV2L-202ENST00000461073 ZNF608Q9ULD9 1512 aaPredicted RBP25.35■■□□□ 1.65
SKIV2L-202ENST00000461073 WDR97A6NE52 1622 aa25.34■■□□□ 1.65
SKIV2L-202ENST00000461073 AQRO60306 1485 aaKnown RBP eCLIP25.3■■□□□ 1.647e-7■■■■■ 30.5
SKIV2L-202ENST00000461073 EIF4G3O43432 1585 aaKnown RBP25.3■■□□□ 1.64
SKIV2L-202ENST00000461073 GAPVD1Q14C86 1478 aa25.27■■□□□ 1.64
SKIV2L-202ENST00000461073 KIF27Q86VH2 1401 aa25.24■■□□□ 1.63
SKIV2L-202ENST00000461073 GRIN2BQ13224 1484 aa25.21■■□□□ 1.63
SKIV2L-202ENST00000461073 ABCA5Q8WWZ7 1642 aa25.19■■□□□ 1.62
SKIV2L-202ENST00000461073 PBRM1Q86U86 1689 aa25.16■■□□□ 1.62
SKIV2L-202ENST00000461073 SNAPC4Q5SXM2 1469 aa25.09■■□□□ 1.61
SKIV2L-202ENST00000461073 MAGI1Q96QZ7 1491 aaPredicted RBP25.09■■□□□ 1.61
SKIV2L-202ENST00000461073 ERICH3Q5RHP9 1530 aa25.09■■□□□ 1.61
SKIV2L-202ENST00000461073 FBLN2P98095 1184 aa25.08■■□□□ 1.61
SKIV2L-202ENST00000461073 CHMP7Q8WUX9 453 aaPredicted RBP25.05■■□□□ 1.6
SKIV2L-202ENST00000461073 EEA1Q15075 1411 aa25.03■■□□□ 1.6
SKIV2L-202ENST00000461073 IGF1RP08069 1367 aa25■■□□□ 1.59
SKIV2L-202ENST00000461073 RUSC2Q8N2Y8 1516 aa25■■□□□ 1.59
SKIV2L-202ENST00000461073 FHAD1B1AJZ9 1412 aa24.99■■□□□ 1.59
SKIV2L-202ENST00000461073 SYNJ2O15056 1496 aa24.98■■□□□ 1.59
SKIV2L-202ENST00000461073 FAM9AQ8IZU1 332 aaPredicted RBP24.98■■□□□ 1.59
SKIV2L-202ENST00000461073 CUL7Q14999 1698 aa24.97■■□□□ 1.59
SKIV2L-202ENST00000461073 ADAMTS12P58397 1594 aa24.95■■□□□ 1.58
SKIV2L-202ENST00000461073 CSRNP3Q8WYN3 585 aa24.94■■□□□ 1.58
SKIV2L-202ENST00000461073 OSCARQ8IYS5 282 aa24.93■■□□□ 1.58
SKIV2L-202ENST00000461073 CARMIL1Q5VZK9 1371 aa24.93■■□□□ 1.58
SKIV2L-202ENST00000461073 CHD1O14646 1710 aa24.92■■□□□ 1.58
SKIV2L-202ENST00000461073 GRIN2AQ12879 1464 aa24.85■■□□□ 1.57
SKIV2L-202ENST00000461073 RAPGEF2Q9Y4G8 1499 aa24.82■■□□□ 1.56
SKIV2L-202ENST00000461073 PRXQ9BXM0 1461 aa24.74■■□□□ 1.55
SKIV2L-202ENST00000461073 NUP160Q12769 1436 aa24.69■■□□□ 1.54
SKIV2L-202ENST00000461073 CEP170Q5SW79 1584 aa24.67■■□□□ 1.54
SKIV2L-202ENST00000461073 KIF21BO75037 1637 aa24.66■■□□□ 1.54
SKIV2L-202ENST00000461073 EHMT2Q96KQ7 1210 aa24.64■■□□□ 1.54
SKIV2L-202ENST00000461073 UBTFP17480 764 aaKnown RBP24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms