RNA–Protein interactions for RNA: ENST00000459982.5

IRF1-206, Transcript of interferon regulatory factor 1, humanhuman

TSL 3

Gene IRF1, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-206ENST00000459982 NISCHQ9Y2I1 1504 aa39.95■■■■□ 3.99
IRF1-206ENST00000459982 CCDC180Q9P1Z9 1646 aa35.36■■■■□ 3.25
IRF1-206ENST00000459982 ABCC9O60706 1549 aa34.5■■■■□ 3.11
IRF1-206ENST00000459982 DCAF8L2P0C7V8 631 aa33.4■■■□□ 2.94
IRF1-206ENST00000459982 ZCCHC6Q5VYS8 1495 aaKnown RBP33.29■■■□□ 2.92
IRF1-206ENST00000459982 NACADO15069 1562 aa33.24■■■□□ 2.91
IRF1-206ENST00000459982 RB1CC1Q8TDY2 1594 aa33.22■■■□□ 2.91
IRF1-206ENST00000459982 MYO15BQ96JP2 1530 aa33.09■■■□□ 2.89
IRF1-206ENST00000459982 DCAF1Q9Y4B6 1507 aa33.03■■■□□ 2.88
IRF1-206ENST00000459982 UNC13AQ9UPW8 1703 aa32.47■■■□□ 2.79
IRF1-206ENST00000459982 PABPN1Q86U42 306 aaKnown RBP eCLIP32.33■■■□□ 2.77
IRF1-206ENST00000459982 SCRIBQ14160 1630 aa32.33■■■□□ 2.77
IRF1-206ENST00000459982 BICRAQ9NZM4 1560 aa32.24■■■□□ 2.75
IRF1-206ENST00000459982 SHROOM4Q9ULL8 1493 aa31.84■■■□□ 2.69
IRF1-206ENST00000459982 DNAJC5BQ9UF47 199 aa31.56■■■□□ 2.64
IRF1-206ENST00000459982 EIF4G1Q04637 1599 aaKnown RBP31.35■■■□□ 2.61
IRF1-206ENST00000459982 CC2D2AQ9P2K1 1620 aa31.2■■■□□ 2.58
IRF1-206ENST00000459982 CECR2Q9BXF3 1484 aa31.14■■■□□ 2.57
IRF1-206ENST00000459982 SMARCA4P51532 1647 aa30.93■■■□□ 2.54
IRF1-206ENST00000459982 BAZ1AQ9NRL2 1556 aaPredicted RBP30.92■■■□□ 2.54
IRF1-206ENST00000459982 MROH2BQ7Z745 1585 aa30.8■■■□□ 2.52
IRF1-206ENST00000459982 ATAD2BQ9ULI0 1458 aa30.75■■■□□ 2.51
IRF1-206ENST00000459982 NCAPD3P42695 1498 aa30.7■■■□□ 2.5
IRF1-206ENST00000459982 SMARCA2P51531 1590 aa30.69■■■□□ 2.5
IRF1-206ENST00000459982 PEG3Q9GZU2 1588 aa30.62■■■□□ 2.49
IRF1-206ENST00000459982 RSF1Q96T23 1441 aaPredicted RBP30.53■■■□□ 2.48
IRF1-206ENST00000459982 HMGXB3Q12766 1538 aa30.52■■■□□ 2.48
IRF1-206ENST00000459982 BAZ1BQ9UIG0 1483 aaKnown RBP30.49■■■□□ 2.47
IRF1-206ENST00000459982 WIZO95785 1651 aa30.48■■■□□ 2.47
IRF1-206ENST00000459982 TOP2AP11388 1531 aaKnown RBP30.13■■■□□ 2.41
IRF1-206ENST00000459982 SUPT5HO00267 1087 aaKnown RBP29.97■■■□□ 2.39
IRF1-206ENST00000459982 NESP48681 1621 aa29.92■■■□□ 2.38
IRF1-206ENST00000459982 CCDC88BA6NC98 1476 aa29.84■■■□□ 2.37
IRF1-206ENST00000459982 CADPSQ9ULU8 1353 aa29.83■■■□□ 2.37
IRF1-206ENST00000459982 LAMC3Q9Y6N6 1575 aa29.82■■■□□ 2.36
IRF1-206ENST00000459982 ERCC6Q03468 1493 aa29.7■■■□□ 2.35
IRF1-206ENST00000459982 CFTRP13569 1480 aa29.68■■■□□ 2.34
IRF1-206ENST00000459982 PDS5BQ9NTI5 1447 aa29.65■■■□□ 2.34
IRF1-206ENST00000459982 KIF21AQ7Z4S6 1674 aa29.53■■■□□ 2.32
IRF1-206ENST00000459982 FANCD2Q9BXW9 1451 aa29.47■■■□□ 2.31
IRF1-206ENST00000459982 PRDM2Q13029 1718 aa29.4■■■□□ 2.3
IRF1-206ENST00000459982 CEP164Q9UPV0 1460 aa29.39■■■□□ 2.3
IRF1-206ENST00000459982 THOC2Q8NI27 1593 aaKnown RBP29.36■■■□□ 2.29
IRF1-206ENST00000459982 MRC2Q9UBG0 1479 aa29.31■■■□□ 2.28
IRF1-206ENST00000459982 CUX2O14529 1486 aa29.29■■■□□ 2.28
IRF1-206ENST00000459982 WDR62O43379 1518 aa29.2■■■□□ 2.26
IRF1-206ENST00000459982 URB2Q14146 1524 aaKnown RBP29.16■■■□□ 2.26
IRF1-206ENST00000459982 TOPBP1Q92547 1522 aa29.02■■■□□ 2.24
IRF1-206ENST00000459982 ABCC8Q09428 1581 aa29.01■■■□□ 2.24
IRF1-206ENST00000459982 DNMBPQ6XZF7 1577 aa28.98■■■□□ 2.23
IRF1-206ENST00000459982 CUX1P39880 1505 aa28.87■■■□□ 2.21
IRF1-206ENST00000459982 POLA1P09884 1462 aaPredicted RBP28.78■■■□□ 2.2
IRF1-206ENST00000459982 IFT140Q96RY7 1462 aa28.78■■■□□ 2.2
IRF1-206ENST00000459982 WRNQ14191 1432 aaPredicted RBP eCLIP28.77■■■□□ 2.2
IRF1-206ENST00000459982 FGD5Q6ZNL6 1462 aa28.74■■■□□ 2.19
IRF1-206ENST00000459982 SOGA1O94964 1423 aa28.7■■■□□ 2.19
IRF1-206ENST00000459982 RAD54L2Q9Y4B4 1467 aa28.69■■■□□ 2.18
IRF1-206ENST00000459982 TARBP1Q13395 1621 aaKnown RBP28.68■■■□□ 2.18
IRF1-206ENST00000459982 SYNJ1O43426 1573 aa28.67■■■□□ 2.18
IRF1-206ENST00000459982 TOP2BQ02880 1626 aa28.66■■■□□ 2.18
IRF1-206ENST00000459982 ZNF608Q9ULD9 1512 aaPredicted RBP28.66■■■□□ 2.18
IRF1-206ENST00000459982 BIVM-ERCC5R4GMW8 1640 aa28.64■■■□□ 2.18
IRF1-206ENST00000459982 AQRO60306 1485 aaKnown RBP eCLIP28.54■■■□□ 2.165e-7■■■■■ 33.7
IRF1-206ENST00000459982 TDRD9Q8NDG6 1382 aaKnown RBP28.52■■■□□ 2.16
IRF1-206ENST00000459982 EIF4G3O43432 1585 aaKnown RBP28.5■■■□□ 2.15
IRF1-206ENST00000459982 ABCA10Q8WWZ4 1543 aa28.48■■■□□ 2.15
IRF1-206ENST00000459982 WDR97A6NE52 1622 aa28.45■■■□□ 2.14
IRF1-206ENST00000459982 GAPVD1Q14C86 1478 aa28.35■■■□□ 2.13
IRF1-206ENST00000459982 ABCA5Q8WWZ7 1642 aa28.32■■■□□ 2.12
IRF1-206ENST00000459982 GRIN2BQ13224 1484 aa28.31■■■□□ 2.12
IRF1-206ENST00000459982 TRIM41Q8WV44 630 aa28.28■■■□□ 2.12
IRF1-206ENST00000459982 DNAJC5Q9H3Z4 198 aa28.25■■■□□ 2.11
IRF1-206ENST00000459982 SNAPC4Q5SXM2 1469 aa28.24■■■□□ 2.11
IRF1-206ENST00000459982 PBRM1Q86U86 1689 aa28.23■■■□□ 2.11
IRF1-206ENST00000459982 FBLN2P98095 1184 aa28.2■■■□□ 2.1
IRF1-206ENST00000459982 OSCARQ8IYS5 282 aa28.2■■■□□ 2.1
IRF1-206ENST00000459982 MAGI1Q96QZ7 1491 aaPredicted RBP28.2■■■□□ 2.1
IRF1-206ENST00000459982 KIF27Q86VH2 1401 aa28.15■■■□□ 2.1
IRF1-206ENST00000459982 CHMP7Q8WUX9 453 aaPredicted RBP28.14■■■□□ 2.1
IRF1-206ENST00000459982 ERICH3Q5RHP9 1530 aa28.13■■■□□ 2.09
IRF1-206ENST00000459982 CHD1O14646 1710 aa28.11■■■□□ 2.09
IRF1-206ENST00000459982 SYNJ2O15056 1496 aa28.1■■■□□ 2.09
IRF1-206ENST00000459982 CHIC1Q5VXU3 224 aa28.08■■■□□ 2.09
IRF1-206ENST00000459982 IGF1RP08069 1367 aa28.06■■■□□ 2.08
IRF1-206ENST00000459982 FHAD1B1AJZ9 1412 aa28.03■■■□□ 2.08
IRF1-206ENST00000459982 ADAMTS12P58397 1594 aa28.02■■■□□ 2.08
IRF1-206ENST00000459982 RUSC2Q8N2Y8 1516 aa28■■■□□ 2.07
IRF1-206ENST00000459982 GRIN2AQ12879 1464 aa27.94■■■□□ 2.06
IRF1-206ENST00000459982 CARMIL1Q5VZK9 1371 aa27.88■■■□□ 2.05
IRF1-206ENST00000459982 CUL7Q14999 1698 aa27.88■■■□□ 2.05
IRF1-206ENST00000459982 CLASP1Q7Z460 1538 aa27.82■■■□□ 2.04
IRF1-206ENST00000459982 NUP160Q12769 1436 aa27.81■■■□□ 2.04
IRF1-206ENST00000459982 CEP170Q5SW79 1584 aa27.79■■■□□ 2.04
IRF1-206ENST00000459982 CSRNP3Q8WYN3 585 aa27.74■■■□□ 2.03
IRF1-206ENST00000459982 EEA1Q15075 1411 aa27.72■■■□□ 2.03
IRF1-206ENST00000459982 RAPGEF2Q9Y4G8 1499 aa27.71■■■□□ 2.03
IRF1-206ENST00000459982 FAM9AQ8IZU1 332 aaPredicted RBP27.71■■■□□ 2.03
IRF1-206ENST00000459982 ARHGEF11O15085 1522 aa27.67■■■□□ 2.02
IRF1-206ENST00000459982 PRXQ9BXM0 1461 aa27.66■■■□□ 2.02
IRF1-206ENST00000459982 RIMBP3CA6NJZ7 1639 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms