RNA–Protein interactions for RNA: ENST00000458269.6

STRADB-205, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 5

Gene STRADB, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-205ENST00000458269 AEBP2Q6ZN18 517 aaPredicted RBP22.56■■□□□ 1.2
STRADB-205ENST00000458269 CHIC1Q5VXU3 224 aa21.45■■□□□ 1.02
STRADB-205ENST00000458269 NISCHQ9Y2I1 1504 aa19.51■□□□□ 0.71
STRADB-205ENST00000458269 SENP3Q9H4L4 574 aaPredicted RBP19.31■□□□□ 0.68
STRADB-205ENST00000458269 PHF23Q9BUL5 403 aaPredicted RBP19.03■□□□□ 0.64
STRADB-205ENST00000458269 FOXD1Q16676 465 aa17.96■□□□□ 0.47
STRADB-205ENST00000458269 CCDC180Q9P1Z9 1646 aa17.44■□□□□ 0.38
STRADB-205ENST00000458269 PLPPR3Q6T4P5 718 aa17.16■□□□□ 0.34
STRADB-205ENST00000458269 ABCC9O60706 1549 aa16.9■□□□□ 0.3
STRADB-205ENST00000458269 MSH5O43196 834 aa16.86■□□□□ 0.29
STRADB-205ENST00000458269 PIAS4Q8N2W9 510 aaPredicted RBP16.8■□□□□ 0.28
STRADB-205ENST00000458269 PPP6R1Q9UPN7 881 aa16.76■□□□□ 0.27
STRADB-205ENST00000458269 ADRA2BP18089 450 aa16.71■□□□□ 0.27
STRADB-205ENST00000458269 POTEDQ86YR6 584 aa16.44■□□□□ 0.22
STRADB-205ENST00000458269 ZCCHC6Q5VYS8 1495 aaKnown RBP16.33■□□□□ 0.2
STRADB-205ENST00000458269 RB1CC1Q8TDY2 1594 aa16.32■□□□□ 0.2
STRADB-205ENST00000458269 NACADO15069 1562 aa16.3■□□□□ 0.2
STRADB-205ENST00000458269 MYO15BQ96JP2 1530 aa16.24■□□□□ 0.19
STRADB-205ENST00000458269 DCAF1Q9Y4B6 1507 aa16.19■□□□□ 0.18
STRADB-205ENST00000458269 UNC13AQ9UPW8 1703 aa16.05■□□□□ 0.16
STRADB-205ENST00000458269 DCAF8L2P0C7V8 631 aa16.04■□□□□ 0.16
STRADB-205ENST00000458269 SCRIBQ14160 1630 aa15.87■□□□□ 0.13
STRADB-205ENST00000458269 BICRAQ9NZM4 1560 aa15.86■□□□□ 0.13
STRADB-205ENST00000458269 SHROOM4Q9ULL8 1493 aa15.72■□□□□ 0.11
STRADB-205ENST00000458269 PABPN1Q86U42 306 aaKnown RBP eCLIP15.69■□□□□ 0.1
STRADB-205ENST00000458269 EIF4G1Q04637 1599 aaKnown RBP15.43■□□□□ 0.06
STRADB-205ENST00000458269 DNAJC5BQ9UF47 199 aa15.37■□□□□ 0.05
STRADB-205ENST00000458269 SCAF1Q9H7N4 1312 aaKnown RBP15.36■□□□□ 0.05
STRADB-205ENST00000458269 MAPK8IP2Q13387 824 aaPredicted RBP15.34■□□□□ 0.05
STRADB-205ENST00000458269 CC2D2AQ9P2K1 1620 aa15.34■□□□□ 0.05
STRADB-205ENST00000458269 DMRT2Q9Y5R5 561 aa15.29■□□□□ 0.04
STRADB-205ENST00000458269 SMARCA4P51532 1647 aa15.19■□□□□ 0.02
STRADB-205ENST00000458269 CECR2Q9BXF3 1484 aa15.18■□□□□ 0.02
STRADB-205ENST00000458269 BAZ1AQ9NRL2 1556 aaPredicted RBP15.15■□□□□ 0.02
STRADB-205ENST00000458269 MROH2BQ7Z745 1585 aa15.05■□□□□ -0
STRADB-205ENST00000458269 PEG3Q9GZU2 1588 aa15.05■□□□□ -0
STRADB-205ENST00000458269 SMARCA2P51531 1590 aa15.04■□□□□ -0
STRADB-205ENST00000458269 ATAD2BQ9ULI0 1458 aa15.03■□□□□ -0
STRADB-205ENST00000458269 HMGXB3Q12766 1538 aa15.02■□□□□ -0
STRADB-205ENST00000458269 PPP4R3CPQ6ZMV5 832 aa15.01□□□□□ -0.01
STRADB-205ENST00000458269 NCAPD3P42695 1498 aa14.99□□□□□ -0.01
STRADB-205ENST00000458269 BAZ1BQ9UIG0 1483 aaKnown RBP14.93□□□□□ -0.02
STRADB-205ENST00000458269 WIZO95785 1651 aa14.9□□□□□ -0.02
STRADB-205ENST00000458269 RSF1Q96T23 1441 aaPredicted RBP14.84□□□□□ -0.03
STRADB-205ENST00000458269 TOP2AP11388 1531 aaKnown RBP14.77□□□□□ -0.04
STRADB-205ENST00000458269 CNKSR2Q8WXI2 1034 aa14.76□□□□□ -0.05
STRADB-205ENST00000458269 HOXD11P31277 338 aaPredicted RBP14.72□□□□□ -0.05
STRADB-205ENST00000458269 DCAF8L1A6NGE4 600 aa14.67□□□□□ -0.06
STRADB-205ENST00000458269 LAMC3Q9Y6N6 1575 aa14.66□□□□□ -0.06
STRADB-205ENST00000458269 NESP48681 1621 aa14.66□□□□□ -0.06
STRADB-205ENST00000458269 RNF216Q9NWF9 866 aaPredicted RBP14.62□□□□□ -0.07
STRADB-205ENST00000458269 KIF21AQ7Z4S6 1674 aa14.57□□□□□ -0.08
STRADB-205ENST00000458269 ERCC6Q03468 1493 aa14.56□□□□□ -0.08
STRADB-205ENST00000458269 PRDM2Q13029 1718 aa14.54□□□□□ -0.08
STRADB-205ENST00000458269 THOC2Q8NI27 1593 aaKnown RBP14.53□□□□□ -0.08
STRADB-205ENST00000458269 CADPSQ9ULU8 1353 aa14.53□□□□□ -0.08
STRADB-205ENST00000458269 CCDC88BA6NC98 1476 aa14.5□□□□□ -0.09
STRADB-205ENST00000458269 CFTRP13569 1480 aa14.5□□□□□ -0.09
STRADB-205ENST00000458269 PDS5BQ9NTI5 1447 aa14.47□□□□□ -0.09
STRADB-205ENST00000458269 CACNB1Q02641 598 aaPredicted RBP14.46□□□□□ -0.09
STRADB-205ENST00000458269 NCBP3Q53F19 620 aaKnown RBP14.46□□□□□ -0.09
STRADB-205ENST00000458269 CUX2O14529 1486 aa14.44□□□□□ -0.1
STRADB-205ENST00000458269 FANCD2Q9BXW9 1451 aa14.42□□□□□ -0.1
STRADB-205ENST00000458269 CEP164Q9UPV0 1460 aa14.42□□□□□ -0.1
STRADB-205ENST00000458269 MRC2Q9UBG0 1479 aa14.39□□□□□ -0.11
STRADB-205ENST00000458269 WDR62O43379 1518 aa14.39□□□□□ -0.11
STRADB-205ENST00000458269 RNF39Q9H2S5 420 aa14.36□□□□□ -0.11
STRADB-205ENST00000458269 SUPT5HO00267 1087 aaKnown RBP14.35□□□□□ -0.11
STRADB-205ENST00000458269 URB2Q14146 1524 aaKnown RBP14.3□□□□□ -0.12
STRADB-205ENST00000458269 DNMBPQ6XZF7 1577 aa14.23□□□□□ -0.13
STRADB-205ENST00000458269 NPM3O75607 178 aaKnown RBP14.22□□□□□ -0.13
STRADB-205ENST00000458269 TOPBP1Q92547 1522 aa14.2□□□□□ -0.14
STRADB-205ENST00000458269 C1QBPQ07021 282 aaKnown RBP14.17□□□□□ -0.14
STRADB-205ENST00000458269 ABCC8Q09428 1581 aa14.15□□□□□ -0.14
STRADB-205ENST00000458269 CUX1P39880 1505 aa14.13□□□□□ -0.15
STRADB-205ENST00000458269 POLA1P09884 1462 aaPredicted RBP14.1□□□□□ -0.15
STRADB-205ENST00000458269 TARBP1Q13395 1621 aaKnown RBP14.09□□□□□ -0.15
STRADB-205ENST00000458269 IFT140Q96RY7 1462 aa14.09□□□□□ -0.15
STRADB-205ENST00000458269 EIF4G3O43432 1585 aaKnown RBP14.07□□□□□ -0.16
STRADB-205ENST00000458269 WDR97A6NE52 1622 aa14.07□□□□□ -0.16
STRADB-205ENST00000458269 BIVM-ERCC5R4GMW8 1640 aa14.07□□□□□ -0.16
STRADB-205ENST00000458269 FGD5Q6ZNL6 1462 aa14.06□□□□□ -0.16
STRADB-205ENST00000458269 SYNJ1O43426 1573 aa14.05□□□□□ -0.16
STRADB-205ENST00000458269 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.04□□□□□ -0.16
STRADB-205ENST00000458269 TOP2BQ02880 1626 aa14.04□□□□□ -0.16
STRADB-205ENST00000458269 ZNF608Q9ULD9 1512 aaPredicted RBP14.03□□□□□ -0.16
STRADB-205ENST00000458269 WRNQ14191 1432 aaPredicted RBP eCLIP14□□□□□ -0.17
STRADB-205ENST00000458269 RAD54L2Q9Y4B4 1467 aa13.99□□□□□ -0.17
STRADB-205ENST00000458269 ABCA5Q8WWZ7 1642 aa13.94□□□□□ -0.18
STRADB-205ENST00000458269 SOGA1O94964 1423 aa13.93□□□□□ -0.18
STRADB-205ENST00000458269 PBRM1Q86U86 1689 aa13.93□□□□□ -0.18
STRADB-205ENST00000458269 ABCA10Q8WWZ4 1543 aa13.92□□□□□ -0.18
STRADB-205ENST00000458269 KCNA4P22459 653 aa13.92□□□□□ -0.18
STRADB-205ENST00000458269 AQRO60306 1485 aaKnown RBP eCLIP13.9□□□□□ -0.18
STRADB-205ENST00000458269 CHD1O14646 1710 aa13.88□□□□□ -0.19
STRADB-205ENST00000458269 TDRD9Q8NDG6 1382 aaKnown RBP13.86□□□□□ -0.19
STRADB-205ENST00000458269 SNAPC4Q5SXM2 1469 aa13.85□□□□□ -0.19
STRADB-205ENST00000458269 GRIN2BQ13224 1484 aa13.84□□□□□ -0.19
STRADB-205ENST00000458269 GAPVD1Q14C86 1478 aa13.83□□□□□ -0.2
STRADB-205ENST00000458269 MAGI1Q96QZ7 1491 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms