RNA–Protein interactions for RNA: ENST00000457031.5

CARF-219, Transcript of calcium responsive transcription factor, humanhuman

TSL 2

Gene CARF, Length 1,136 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARF-219ENST00000457031 NISCHQ9Y2I1 1504 aa21.4■■□□□ 1.02
CARF-219ENST00000457031 AEBP2Q6ZN18 517 aaPredicted RBP21.04■□□□□ 0.96
CARF-219ENST00000457031 CHIC1Q5VXU3 224 aa20.19■□□□□ 0.82
CARF-219ENST00000457031 CCDC180Q9P1Z9 1646 aa19.02■□□□□ 0.64
CARF-219ENST00000457031 ABCC9O60706 1549 aa18.18■□□□□ 0.5
CARF-219ENST00000457031 ZCCHC6Q5VYS8 1495 aaKnown RBP17.91■□□□□ 0.46
CARF-219ENST00000457031 SENP3Q9H4L4 574 aaPredicted RBP17.84■□□□□ 0.45
CARF-219ENST00000457031 PHF23Q9BUL5 403 aaPredicted RBP17.78■□□□□ 0.44
CARF-219ENST00000457031 DCAF1Q9Y4B6 1507 aa17.74■□□□□ 0.43
CARF-219ENST00000457031 DCAF8L2P0C7V8 631 aa17.73■□□□□ 0.43
CARF-219ENST00000457031 NACADO15069 1562 aa17.73■□□□□ 0.43
CARF-219ENST00000457031 RB1CC1Q8TDY2 1594 aa17.7■□□□□ 0.42
CARF-219ENST00000457031 MYO15BQ96JP2 1530 aa17.69■□□□□ 0.42
CARF-219ENST00000457031 UNC13AQ9UPW8 1703 aa17.35■□□□□ 0.37
CARF-219ENST00000457031 SCRIBQ14160 1630 aa17.32■□□□□ 0.36
CARF-219ENST00000457031 BICRAQ9NZM4 1560 aa17.08■□□□□ 0.32
CARF-219ENST00000457031 SHROOM4Q9ULL8 1493 aa17.08■□□□□ 0.32
CARF-219ENST00000457031 PABPN1Q86U42 306 aaKnown RBP eCLIP16.97■□□□□ 0.31
CARF-219ENST00000457031 FOXD1Q16676 465 aa16.65■□□□□ 0.26
CARF-219ENST00000457031 EIF4G1Q04637 1599 aaKnown RBP16.64■□□□□ 0.25
CARF-219ENST00000457031 BAZ1AQ9NRL2 1556 aaPredicted RBP16.62■□□□□ 0.25
CARF-219ENST00000457031 SMARCA4P51532 1647 aa16.6■□□□□ 0.25
CARF-219ENST00000457031 CECR2Q9BXF3 1484 aa16.59■□□□□ 0.25
CARF-219ENST00000457031 CC2D2AQ9P2K1 1620 aa16.49■□□□□ 0.23
CARF-219ENST00000457031 MROH2BQ7Z745 1585 aa16.49■□□□□ 0.23
CARF-219ENST00000457031 SMARCA2P51531 1590 aa16.43■□□□□ 0.22
CARF-219ENST00000457031 PEG3Q9GZU2 1588 aa16.4■□□□□ 0.22
CARF-219ENST00000457031 WIZO95785 1651 aa16.39■□□□□ 0.21
CARF-219ENST00000457031 RSF1Q96T23 1441 aaPredicted RBP16.38■□□□□ 0.21
CARF-219ENST00000457031 ATAD2BQ9ULI0 1458 aa16.35■□□□□ 0.21
CARF-219ENST00000457031 HMGXB3Q12766 1538 aa16.31■□□□□ 0.2
CARF-219ENST00000457031 BAZ1BQ9UIG0 1483 aaKnown RBP16.29■□□□□ 0.2
CARF-219ENST00000457031 NCAPD3P42695 1498 aa16.28■□□□□ 0.2
CARF-219ENST00000457031 PLPPR3Q6T4P5 718 aa16.26■□□□□ 0.19
CARF-219ENST00000457031 DNAJC5BQ9UF47 199 aa16.24■□□□□ 0.19
CARF-219ENST00000457031 TOP2AP11388 1531 aaKnown RBP16.24■□□□□ 0.19
CARF-219ENST00000457031 SUPT5HO00267 1087 aaKnown RBP16.23■□□□□ 0.19
CARF-219ENST00000457031 CCDC88BA6NC98 1476 aa15.97■□□□□ 0.15
CARF-219ENST00000457031 PRDM2Q13029 1718 aa15.92■□□□□ 0.14
CARF-219ENST00000457031 LAMC3Q9Y6N6 1575 aa15.89■□□□□ 0.13
CARF-219ENST00000457031 CADPSQ9ULU8 1353 aa15.82■□□□□ 0.12
CARF-219ENST00000457031 CFTRP13569 1480 aa15.81■□□□□ 0.12
CARF-219ENST00000457031 PPP6R1Q9UPN7 881 aa15.81■□□□□ 0.12
CARF-219ENST00000457031 NESP48681 1621 aa15.8■□□□□ 0.12
CARF-219ENST00000457031 ADRA2BP18089 450 aa15.79■□□□□ 0.12
CARF-219ENST00000457031 KIF21AQ7Z4S6 1674 aa15.75■□□□□ 0.11
CARF-219ENST00000457031 PDS5BQ9NTI5 1447 aa15.73■□□□□ 0.11
CARF-219ENST00000457031 ERCC6Q03468 1493 aa15.7■□□□□ 0.1
CARF-219ENST00000457031 FANCD2Q9BXW9 1451 aa15.68■□□□□ 0.1
CARF-219ENST00000457031 CEP164Q9UPV0 1460 aa15.67■□□□□ 0.1
CARF-219ENST00000457031 PIAS4Q8N2W9 510 aaPredicted RBP15.63■□□□□ 0.09
CARF-219ENST00000457031 THOC2Q8NI27 1593 aaKnown RBP15.57■□□□□ 0.08
CARF-219ENST00000457031 MRC2Q9UBG0 1479 aa15.56■□□□□ 0.08
CARF-219ENST00000457031 ABCC8Q09428 1581 aa15.53■□□□□ 0.08
CARF-219ENST00000457031 DNMBPQ6XZF7 1577 aa15.53■□□□□ 0.08
CARF-219ENST00000457031 WDR62O43379 1518 aa15.5■□□□□ 0.07
CARF-219ENST00000457031 BIVM-ERCC5R4GMW8 1640 aa15.5■□□□□ 0.07
CARF-219ENST00000457031 URB2Q14146 1524 aaKnown RBP15.49■□□□□ 0.07
CARF-219ENST00000457031 WRNQ14191 1432 aaPredicted RBP eCLIP15.49■□□□□ 0.07
CARF-219ENST00000457031 CUX1P39880 1505 aa15.47■□□□□ 0.07
CARF-219ENST00000457031 TOPBP1Q92547 1522 aa15.47■□□□□ 0.07
CARF-219ENST00000457031 TOP2BQ02880 1626 aa15.46■□□□□ 0.07
CARF-219ENST00000457031 SYNJ1O43426 1573 aa15.46■□□□□ 0.07
CARF-219ENST00000457031 MSH5O43196 834 aa15.41■□□□□ 0.06
CARF-219ENST00000457031 CUX2O14529 1486 aa15.39■□□□□ 0.05
CARF-219ENST00000457031 FGD5Q6ZNL6 1462 aa15.38■□□□□ 0.05
CARF-219ENST00000457031 POLA1P09884 1462 aaPredicted RBP15.35■□□□□ 0.05
CARF-219ENST00000457031 TRIM41Q8WV44 630 aa15.33■□□□□ 0.04
CARF-219ENST00000457031 WDR97A6NE52 1622 aa15.32■□□□□ 0.04
CARF-219ENST00000457031 TARBP1Q13395 1621 aaKnown RBP15.3■□□□□ 0.04
CARF-219ENST00000457031 IFT140Q96RY7 1462 aa15.3■□□□□ 0.04
CARF-219ENST00000457031 SOGA1O94964 1423 aa15.27■□□□□ 0.04
CARF-219ENST00000457031 RAD54L2Q9Y4B4 1467 aa15.26■□□□□ 0.03
CARF-219ENST00000457031 ABCA10Q8WWZ4 1543 aa15.23■□□□□ 0.03
CARF-219ENST00000457031 EIF4G3O43432 1585 aaKnown RBP15.22■□□□□ 0.03
CARF-219ENST00000457031 PBRM1Q86U86 1689 aa15.2■□□□□ 0.02
CARF-219ENST00000457031 ABCA5Q8WWZ7 1642 aa15.2■□□□□ 0.02
CARF-219ENST00000457031 ZNF608Q9ULD9 1512 aaPredicted RBP15.16■□□□□ 0.02
CARF-219ENST00000457031 KIF27Q86VH2 1401 aa15.15■□□□□ 0.02
CARF-219ENST00000457031 GAPVD1Q14C86 1478 aa15.14■□□□□ 0.01
CARF-219ENST00000457031 TDRD9Q8NDG6 1382 aaKnown RBP15.12■□□□□ 0.01
CARF-219ENST00000457031 AQRO60306 1485 aaKnown RBP eCLIP15.11■□□□□ 0.01
CARF-219ENST00000457031 EEA1Q15075 1411 aa15.09■□□□□ 0.01
CARF-219ENST00000457031 GRIN2BQ13224 1484 aa15.09■□□□□ 0.01
CARF-219ENST00000457031 ERICH3Q5RHP9 1530 aa15.09■□□□□ 0.01
CARF-219ENST00000457031 CUL7Q14999 1698 aa15.09■□□□□ 0.01
CARF-219ENST00000457031 RUSC2Q8N2Y8 1516 aa15.05■□□□□ -0
CARF-219ENST00000457031 MAGI1Q96QZ7 1491 aaPredicted RBP15.04■□□□□ -0
CARF-219ENST00000457031 SNAPC4Q5SXM2 1469 aa15.03■□□□□ -0
CARF-219ENST00000457031 ADAMTS12P58397 1594 aa15.02■□□□□ -0
CARF-219ENST00000457031 CHD1O14646 1710 aa15□□□□□ -0.01
CARF-219ENST00000457031 FAM9AQ8IZU1 332 aaPredicted RBP14.99□□□□□ -0.01
CARF-219ENST00000457031 IGF1RP08069 1367 aa14.97□□□□□ -0.01
CARF-219ENST00000457031 SYNJ2O15056 1496 aa14.96□□□□□ -0.01
CARF-219ENST00000457031 FHAD1B1AJZ9 1412 aa14.96□□□□□ -0.01
CARF-219ENST00000457031 KIF21BO75037 1637 aa14.95□□□□□ -0.02
CARF-219ENST00000457031 CSRNP3Q8WYN3 585 aa14.95□□□□□ -0.02
CARF-219ENST00000457031 CARMIL1Q5VZK9 1371 aa14.93□□□□□ -0.02
CARF-219ENST00000457031 RAPGEF2Q9Y4G8 1499 aa14.91□□□□□ -0.02
CARF-219ENST00000457031 GRIN2AQ12879 1464 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms