RNA–Protein interactions for RNA: ENST00000457009.1

AL049646.1-201, humanhuman

TSL 1 (best) BASIC

Gene AL049646.1, Length 2,490 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049646.1-201ENST00000457009 NISCHQ9Y2I1 1504 aa18.19■□□□□ 0.5
AL049646.1-201ENST00000457009 AEBP2Q6ZN18 517 aaPredicted RBP16.6■□□□□ 0.25
AL049646.1-201ENST00000457009 CHIC1Q5VXU3 224 aa15.94■□□□□ 0.14
AL049646.1-201ENST00000457009 CCDC180Q9P1Z9 1646 aa15.72■□□□□ 0.11
AL049646.1-201ENST00000457009 ZCCHC6Q5VYS8 1495 aaKnown RBP15.33■□□□□ 0.04
AL049646.1-201ENST00000457009 SHROOM4Q9ULL8 1493 aa15.17■□□□□ 0.02
AL049646.1-201ENST00000457009 DCAF8L2P0C7V8 631 aa15.05■□□□□ 0
AL049646.1-201ENST00000457009 DCAF1Q9Y4B6 1507 aa14.96□□□□□ -0.01
AL049646.1-201ENST00000457009 ABCC9O60706 1549 aa14.75□□□□□ -0.05
AL049646.1-201ENST00000457009 SUPT5HO00267 1087 aaKnown RBP14.68□□□□□ -0.06
AL049646.1-201ENST00000457009 MYO15BQ96JP2 1530 aa14.66□□□□□ -0.06
AL049646.1-201ENST00000457009 SCRIBQ14160 1630 aa14.61□□□□□ -0.07
AL049646.1-201ENST00000457009 NACADO15069 1562 aa14.56□□□□□ -0.08
AL049646.1-201ENST00000457009 SENP3Q9H4L4 574 aaPredicted RBP14.49□□□□□ -0.09
AL049646.1-201ENST00000457009 RB1CC1Q8TDY2 1594 aa14.4□□□□□ -0.1
AL049646.1-201ENST00000457009 RSF1Q96T23 1441 aaPredicted RBP14.23□□□□□ -0.13
AL049646.1-201ENST00000457009 UNC13AQ9UPW8 1703 aa14.23□□□□□ -0.13
AL049646.1-201ENST00000457009 CECR2Q9BXF3 1484 aa14.18□□□□□ -0.14
AL049646.1-201ENST00000457009 PHF23Q9BUL5 403 aaPredicted RBP14.18□□□□□ -0.14
AL049646.1-201ENST00000457009 MROH2BQ7Z745 1585 aa14.12□□□□□ -0.15
AL049646.1-201ENST00000457009 WIZO95785 1651 aa14.05□□□□□ -0.16
AL049646.1-201ENST00000457009 BICRAQ9NZM4 1560 aa14.02□□□□□ -0.16
AL049646.1-201ENST00000457009 BAZ1AQ9NRL2 1556 aaPredicted RBP14.01□□□□□ -0.17
AL049646.1-201ENST00000457009 PABPN1Q86U42 306 aaKnown RBP eCLIP13.98□□□□□ -0.17
AL049646.1-201ENST00000457009 SMARCA4P51532 1647 aa13.96□□□□□ -0.17
AL049646.1-201ENST00000457009 TOP2AP11388 1531 aaKnown RBP13.83□□□□□ -0.19
AL049646.1-201ENST00000457009 EIF4G1Q04637 1599 aaKnown RBP13.75□□□□□ -0.21
AL049646.1-201ENST00000457009 SMARCA2P51531 1590 aa13.74□□□□□ -0.21
AL049646.1-201ENST00000457009 CCDC88BA6NC98 1476 aa13.73□□□□□ -0.21
AL049646.1-201ENST00000457009 TRIM41Q8WV44 630 aa13.72□□□□□ -0.21
AL049646.1-201ENST00000457009 PEG3Q9GZU2 1588 aa13.71□□□□□ -0.21
AL049646.1-201ENST00000457009 LOC105371045A0A1W2PR82 267 aa13.67□□□□□ -0.22
AL049646.1-201ENST00000457009 ATAD2BQ9ULI0 1458 aa13.64□□□□□ -0.23
AL049646.1-201ENST00000457009 BAZ1BQ9UIG0 1483 aaKnown RBP13.6□□□□□ -0.23
AL049646.1-201ENST00000457009 ABCC8Q09428 1581 aa13.58□□□□□ -0.24
AL049646.1-201ENST00000457009 FAM9AQ8IZU1 332 aaPredicted RBP13.57□□□□□ -0.24
AL049646.1-201ENST00000457009 POTEDQ86YR6 584 aa13.56□□□□□ -0.24
AL049646.1-201ENST00000457009 HMGXB3Q12766 1538 aa13.46□□□□□ -0.26
AL049646.1-201ENST00000457009 EHMT2Q96KQ7 1210 aa13.45□□□□□ -0.26
AL049646.1-201ENST00000457009 NCAPD3P42695 1498 aa13.43□□□□□ -0.26
AL049646.1-201ENST00000457009 FOXD1Q16676 465 aa13.42□□□□□ -0.26
AL049646.1-201ENST00000457009 WRNQ14191 1432 aaPredicted RBP eCLIP13.38□□□□□ -0.27
AL049646.1-201ENST00000457009 SYNJ1O43426 1573 aa13.37□□□□□ -0.27
AL049646.1-201ENST00000457009 SOGA1O94964 1423 aa13.35□□□□□ -0.27
AL049646.1-201ENST00000457009 CC2D2AQ9P2K1 1620 aa13.33□□□□□ -0.28
AL049646.1-201ENST00000457009 RUSC2Q8N2Y8 1516 aa13.32□□□□□ -0.28
AL049646.1-201ENST00000457009 PCGF6Q9BYE7 350 aa13.3□□□□□ -0.28
AL049646.1-201ENST00000457009 EEA1Q15075 1411 aa13.25□□□□□ -0.29
AL049646.1-201ENST00000457009 TOP2BQ02880 1626 aa13.24□□□□□ -0.29
AL049646.1-201ENST00000457009 CFTRP13569 1480 aa13.23□□□□□ -0.29
AL049646.1-201ENST00000457009 BIVM-ERCC5R4GMW8 1640 aa13.23□□□□□ -0.29
AL049646.1-201ENST00000457009 PLPPR3Q6T4P5 718 aa13.23□□□□□ -0.29
AL049646.1-201ENST00000457009 PRDM2Q13029 1718 aa13.22□□□□□ -0.29
AL049646.1-201ENST00000457009 CSRNP3Q8WYN3 585 aa13.21□□□□□ -0.29
AL049646.1-201ENST00000457009 CUX1P39880 1505 aa13.18□□□□□ -0.3
AL049646.1-201ENST00000457009 TRIM26Q12899 539 aaPredicted RBP13.15□□□□□ -0.3
AL049646.1-201ENST00000457009 GOLGA3Q08378 1498 aa13.15□□□□□ -0.31
AL049646.1-201ENST00000457009 CADPSQ9ULU8 1353 aa13.14□□□□□ -0.31
AL049646.1-201ENST00000457009 KIF21BO75037 1637 aa13.13□□□□□ -0.31
AL049646.1-201ENST00000457009 TNIKQ9UKE5 1360 aa13.13□□□□□ -0.31
AL049646.1-201ENST00000457009 CEP162Q5TB80 1403 aa13.13□□□□□ -0.31
AL049646.1-201ENST00000457009 UBTFP17480 764 aaKnown RBP13.11□□□□□ -0.31
AL049646.1-201ENST00000457009 CEP164Q9UPV0 1460 aa13.11□□□□□ -0.31
AL049646.1-201ENST00000457009 HRCP23327 699 aa13.07□□□□□ -0.32
AL049646.1-201ENST00000457009 PPARGC1BQ86YN6 1023 aaKnown RBP13.07□□□□□ -0.32
AL049646.1-201ENST00000457009 RAPGEF2Q9Y4G8 1499 aa13.05□□□□□ -0.32
AL049646.1-201ENST00000457009 NESP48681 1621 aa13.04□□□□□ -0.32
AL049646.1-201ENST00000457009 FANCD2Q9BXW9 1451 aa13.03□□□□□ -0.32
AL049646.1-201ENST00000457009 MSH5O43196 834 aa13□□□□□ -0.33
AL049646.1-201ENST00000457009 KIF27Q86VH2 1401 aa12.99□□□□□ -0.33
AL049646.1-201ENST00000457009 FGD5Q6ZNL6 1462 aa12.99□□□□□ -0.33
AL049646.1-201ENST00000457009 DNAJC5BQ9UF47 199 aa12.99□□□□□ -0.33
AL049646.1-201ENST00000457009 PRXQ9BXM0 1461 aa12.98□□□□□ -0.33
AL049646.1-201ENST00000457009 ERICH3Q5RHP9 1530 aa12.97□□□□□ -0.33
AL049646.1-201ENST00000457009 LAMC3Q9Y6N6 1575 aa12.96□□□□□ -0.33
AL049646.1-201ENST00000457009 CLIP1P30622 1438 aa12.96□□□□□ -0.34
AL049646.1-201ENST00000457009 CUX2O14529 1486 aa12.95□□□□□ -0.34
AL049646.1-201ENST00000457009 DNMBPQ6XZF7 1577 aa12.95□□□□□ -0.34
AL049646.1-201ENST00000457009 TTBK1Q5TCY1 1321 aaPredicted RBP12.93□□□□□ -0.34
AL049646.1-201ENST00000457009 RANGAP1P46060 587 aaPredicted RBP12.93□□□□□ -0.34
AL049646.1-201ENST00000457009 TOPBP1Q92547 1522 aa12.92□□□□□ -0.34
AL049646.1-201ENST00000457009 RAD54L2Q9Y4B4 1467 aa12.89□□□□□ -0.35
AL049646.1-201ENST00000457009 KIF21AQ7Z4S6 1674 aa12.88□□□□□ -0.35
AL049646.1-201ENST00000457009 POLA1P09884 1462 aaPredicted RBP12.87□□□□□ -0.35
AL049646.1-201ENST00000457009 URB2Q14146 1524 aaKnown RBP12.87□□□□□ -0.35
AL049646.1-201ENST00000457009 IGF1RP08069 1367 aa12.87□□□□□ -0.35
AL049646.1-201ENST00000457009 VPS8Q8N3P4 1428 aa12.86□□□□□ -0.35
AL049646.1-201ENST00000457009 PDS5BQ9NTI5 1447 aa12.84□□□□□ -0.35
AL049646.1-201ENST00000457009 ABCA10Q8WWZ4 1543 aa12.83□□□□□ -0.35
AL049646.1-201ENST00000457009 ARAP1Q96P48 1450 aa12.83□□□□□ -0.36
AL049646.1-201ENST00000457009 WDR97A6NE52 1622 aa12.82□□□□□ -0.36
AL049646.1-201ENST00000457009 CARMIL1Q5VZK9 1371 aa12.81□□□□□ -0.36
AL049646.1-201ENST00000457009 ARHGAP35Q9NRY4 1499 aa12.76□□□□□ -0.37
AL049646.1-201ENST00000457009 ABCA5Q8WWZ7 1642 aa12.74□□□□□ -0.37
AL049646.1-201ENST00000457009 CUL7Q14999 1698 aa12.74□□□□□ -0.37
AL049646.1-201ENST00000457009 APLP2Q06481 763 aa12.73□□□□□ -0.37
AL049646.1-201ENST00000457009 TDRD9Q8NDG6 1382 aaKnown RBP12.72□□□□□ -0.37
AL049646.1-201ENST00000457009 TARBP1Q13395 1621 aaKnown RBP12.71□□□□□ -0.37
AL049646.1-201ENST00000457009 ZEB1P37275 1124 aaPredicted RBP12.7□□□□□ -0.38
AL049646.1-201ENST00000457009 MRC2Q9UBG0 1479 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms