RNA–Protein interactions for RNA: ENST00000456897.5

LINC01346-202, Transcript of long intergenic non-protein coding RNA 1346, humanhuman

TSL 3

Gene LINC01346, Length 561 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01346-202ENST00000456897 NISCHQ9Y2I1 1504 aa13.85□□□□□ -0.19
LINC01346-202ENST00000456897 CHIC1Q5VXU3 224 aa13.28□□□□□ -0.28
LINC01346-202ENST00000456897 AEBP2Q6ZN18 517 aaPredicted RBP12.75□□□□□ -0.37
LINC01346-202ENST00000456897 CCDC180Q9P1Z9 1646 aa12.35□□□□□ -0.43
LINC01346-202ENST00000456897 ABCC9O60706 1549 aa12.28□□□□□ -0.44
LINC01346-202ENST00000456897 PHF23Q9BUL5 403 aaPredicted RBP11.84□□□□□ -0.51
LINC01346-202ENST00000456897 RB1CC1Q8TDY2 1594 aa11.71□□□□□ -0.54
LINC01346-202ENST00000456897 NACADO15069 1562 aa11.66□□□□□ -0.54
LINC01346-202ENST00000456897 DCAF8L2P0C7V8 631 aa11.64□□□□□ -0.55
LINC01346-202ENST00000456897 MYO15BQ96JP2 1530 aa11.54□□□□□ -0.56
LINC01346-202ENST00000456897 DNAJC5BQ9UF47 199 aa11.5□□□□□ -0.57
LINC01346-202ENST00000456897 ZCCHC6Q5VYS8 1495 aaKnown RBP11.5□□□□□ -0.57
LINC01346-202ENST00000456897 UNC13AQ9UPW8 1703 aa11.49□□□□□ -0.57
LINC01346-202ENST00000456897 PABPN1Q86U42 306 aaKnown RBP eCLIP11.47□□□□□ -0.57
LINC01346-202ENST00000456897 DCAF1Q9Y4B6 1507 aa11.43□□□□□ -0.58
LINC01346-202ENST00000456897 BICRAQ9NZM4 1560 aa11.41□□□□□ -0.58
LINC01346-202ENST00000456897 SCRIBQ14160 1630 aa11.28□□□□□ -0.6
LINC01346-202ENST00000456897 SHROOM4Q9ULL8 1493 aa11.19□□□□□ -0.62
LINC01346-202ENST00000456897 PLPPR3Q6T4P5 718 aa11.14□□□□□ -0.63
LINC01346-202ENST00000456897 EHMT2Q96KQ7 1210 aa11.13□□□□□ -0.63
LINC01346-202ENST00000456897 EIF4G1Q04637 1599 aaKnown RBP11.1□□□□□ -0.63
LINC01346-202ENST00000456897 CC2D2AQ9P2K1 1620 aa11.09□□□□□ -0.63
LINC01346-202ENST00000456897 CECR2Q9BXF3 1484 aa11.04□□□□□ -0.64
LINC01346-202ENST00000456897 NCAPD3P42695 1498 aa10.79□□□□□ -0.68
LINC01346-202ENST00000456897 SMARCA4P51532 1647 aa10.78□□□□□ -0.68
LINC01346-202ENST00000456897 SLC24A1O60721 1099 aa10.78□□□□□ -0.68
LINC01346-202ENST00000456897 KCNA4P22459 653 aa10.78□□□□□ -0.68
LINC01346-202ENST00000456897 ATAD2BQ9ULI0 1458 aa10.77□□□□□ -0.69
LINC01346-202ENST00000456897 SENP3Q9H4L4 574 aaPredicted RBP10.77□□□□□ -0.69
LINC01346-202ENST00000456897 BAZ1AQ9NRL2 1556 aaPredicted RBP10.72□□□□□ -0.69
LINC01346-202ENST00000456897 SMARCA2P51531 1590 aa10.7□□□□□ -0.7
LINC01346-202ENST00000456897 MROH2BQ7Z745 1585 aa10.69□□□□□ -0.7
LINC01346-202ENST00000456897 HMGXB3Q12766 1538 aa10.69□□□□□ -0.7
LINC01346-202ENST00000456897 PEG3Q9GZU2 1588 aa10.68□□□□□ -0.7
LINC01346-202ENST00000456897 BAZ1BQ9UIG0 1483 aaKnown RBP10.65□□□□□ -0.7
LINC01346-202ENST00000456897 CSRNP3Q8WYN3 585 aa10.64□□□□□ -0.71
LINC01346-202ENST00000456897 NESP48681 1621 aa10.6□□□□□ -0.71
LINC01346-202ENST00000456897 WIZO95785 1651 aa10.57□□□□□ -0.72
LINC01346-202ENST00000456897 ERCC6Q03468 1493 aa10.55□□□□□ -0.72
LINC01346-202ENST00000456897 CUX2O14529 1486 aa10.51□□□□□ -0.73
LINC01346-202ENST00000456897 RSF1Q96T23 1441 aaPredicted RBP10.5□□□□□ -0.73
LINC01346-202ENST00000456897 ADRA2BP18089 450 aa10.5□□□□□ -0.73
LINC01346-202ENST00000456897 LAMC3Q9Y6N6 1575 aa10.5□□□□□ -0.73
LINC01346-202ENST00000456897 CADPSQ9ULU8 1353 aa10.46□□□□□ -0.74
LINC01346-202ENST00000456897 KIF21AQ7Z4S6 1674 aa10.45□□□□□ -0.74
LINC01346-202ENST00000456897 THOC2Q8NI27 1593 aaKnown RBP10.45□□□□□ -0.74
LINC01346-202ENST00000456897 PDS5BQ9NTI5 1447 aa10.43□□□□□ -0.74
LINC01346-202ENST00000456897 DNAJC5Q9H3Z4 198 aa10.43□□□□□ -0.74
LINC01346-202ENST00000456897 TOP2AP11388 1531 aaKnown RBP10.41□□□□□ -0.74
LINC01346-202ENST00000456897 SLC4A1APQ9BWU0 796 aaKnown RBP10.39□□□□□ -0.75
LINC01346-202ENST00000456897 CFTRP13569 1480 aa10.36□□□□□ -0.75
LINC01346-202ENST00000456897 MRC2Q9UBG0 1479 aa10.34□□□□□ -0.75
LINC01346-202ENST00000456897 FANCD2Q9BXW9 1451 aa10.33□□□□□ -0.76
LINC01346-202ENST00000456897 WDR62O43379 1518 aa10.33□□□□□ -0.76
LINC01346-202ENST00000456897 CCDC88BA6NC98 1476 aa10.32□□□□□ -0.76
LINC01346-202ENST00000456897 CEP164Q9UPV0 1460 aa10.31□□□□□ -0.76
LINC01346-202ENST00000456897 RTN4Q9NQC3 1192 aaKnown RBP10.3□□□□□ -0.76
LINC01346-202ENST00000456897 URB2Q14146 1524 aaKnown RBP10.26□□□□□ -0.77
LINC01346-202ENST00000456897 PRDM2Q13029 1718 aa10.24□□□□□ -0.77
LINC01346-202ENST00000456897 AMER1Q5JTC6 1135 aaPredicted RBP10.21□□□□□ -0.77
LINC01346-202ENST00000456897 PPP6R1Q9UPN7 881 aa10.16□□□□□ -0.78
LINC01346-202ENST00000456897 TOPBP1Q92547 1522 aa10.15□□□□□ -0.78
LINC01346-202ENST00000456897 ZNF608Q9ULD9 1512 aaPredicted RBP10.12□□□□□ -0.79
LINC01346-202ENST00000456897 IFT140Q96RY7 1462 aa10.11□□□□□ -0.79
LINC01346-202ENST00000456897 DNMBPQ6XZF7 1577 aa10.11□□□□□ -0.79
LINC01346-202ENST00000456897 SUPT5HO00267 1087 aaKnown RBP10.11□□□□□ -0.79
LINC01346-202ENST00000456897 ABCC8Q09428 1581 aa10.1□□□□□ -0.79
LINC01346-202ENST00000456897 OSCARQ8IYS5 282 aa10.07□□□□□ -0.8
LINC01346-202ENST00000456897 TARBP1Q13395 1621 aaKnown RBP10.07□□□□□ -0.8
LINC01346-202ENST00000456897 POLA1P09884 1462 aaPredicted RBP10.06□□□□□ -0.8
LINC01346-202ENST00000456897 EIF4G3O43432 1585 aaKnown RBP10.05□□□□□ -0.8
LINC01346-202ENST00000456897 AQRO60306 1485 aaKnown RBP eCLIP10.04□□□□□ -0.8
LINC01346-202ENST00000456897 RAD54L2Q9Y4B4 1467 aa10.04□□□□□ -0.8
LINC01346-202ENST00000456897 CUX1P39880 1505 aa10.02□□□□□ -0.8
LINC01346-202ENST00000456897 SOGA1O94964 1423 aa10.01□□□□□ -0.81
LINC01346-202ENST00000456897 FGD5Q6ZNL6 1462 aa10.01□□□□□ -0.81
LINC01346-202ENST00000456897 TDRD9Q8NDG6 1382 aaKnown RBP10□□□□□ -0.81
LINC01346-202ENST00000456897 TRIM41Q8WV44 630 aa9.99□□□□□ -0.81
LINC01346-202ENST00000456897 ZBTB22O15209 634 aa9.98□□□□□ -0.81
LINC01346-202ENST00000456897 FOXD1Q16676 465 aa9.97□□□□□ -0.81
LINC01346-202ENST00000456897 PPP4R3CPQ6ZMV5 832 aa9.97□□□□□ -0.81
LINC01346-202ENST00000456897 CHD1O14646 1710 aa9.96□□□□□ -0.82
LINC01346-202ENST00000456897 WDR97A6NE52 1622 aa9.93□□□□□ -0.82
LINC01346-202ENST00000456897 RIMBP3CA6NJZ7 1639 aa9.93□□□□□ -0.82
LINC01346-202ENST00000456897 RIMBP3BA6NNM3 1639 aa9.93□□□□□ -0.82
LINC01346-202ENST00000456897 RIMBP3Q9UFD9 1639 aa9.93□□□□□ -0.82
LINC01346-202ENST00000456897 SNAPC4Q5SXM2 1469 aa9.92□□□□□ -0.82
LINC01346-202ENST00000456897 FBLN2P98095 1184 aa9.92□□□□□ -0.82
LINC01346-202ENST00000456897 ARHGEF11O15085 1522 aa9.91□□□□□ -0.82
LINC01346-202ENST00000456897 NCBP3Q53F19 620 aaKnown RBP9.9□□□□□ -0.82
LINC01346-202ENST00000456897 ABCA10Q8WWZ4 1543 aa9.9□□□□□ -0.82
LINC01346-202ENST00000456897 GRIN2BQ13224 1484 aa9.9□□□□□ -0.83
LINC01346-202ENST00000456897 SYNJ1O43426 1573 aa9.89□□□□□ -0.83
LINC01346-202ENST00000456897 WRNQ14191 1432 aaPredicted RBP eCLIP9.89□□□□□ -0.83
LINC01346-202ENST00000456897 TOP2BQ02880 1626 aa9.89□□□□□ -0.83
LINC01346-202ENST00000456897 GAPVD1Q14C86 1478 aa9.88□□□□□ -0.83
LINC01346-202ENST00000456897 MAGI1Q96QZ7 1491 aaPredicted RBP9.88□□□□□ -0.83
LINC01346-202ENST00000456897 ABCA5Q8WWZ7 1642 aa9.88□□□□□ -0.83
LINC01346-202ENST00000456897 BIVM-ERCC5R4GMW8 1640 aa9.88□□□□□ -0.83
LINC01346-202ENST00000456897 PBRM1Q86U86 1689 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms