RNA–Protein interactions for RNA: ENST00000456611.1

MED28P7-201, Transcript of mediator complex subunit 28 pseudogene 7, humanhuman

BASIC

Gene MED28P7, Length 530 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28P7-201ENST00000456611 AEBP2Q6ZN18 517 aaPredicted RBP19.37■□□□□ 0.69
MED28P7-201ENST00000456611 CHIC1Q5VXU3 224 aa18.77■□□□□ 0.6
MED28P7-201ENST00000456611 NISCHQ9Y2I1 1504 aa17.77■□□□□ 0.44
MED28P7-201ENST00000456611 SENP3Q9H4L4 574 aaPredicted RBP16.49■□□□□ 0.23
MED28P7-201ENST00000456611 PHF23Q9BUL5 403 aaPredicted RBP16.48■□□□□ 0.23
MED28P7-201ENST00000456611 CCDC180Q9P1Z9 1646 aa15.9■□□□□ 0.14
MED28P7-201ENST00000456611 ABCC9O60706 1549 aa15.49■□□□□ 0.07
MED28P7-201ENST00000456611 FOXD1Q16676 465 aa15.31■□□□□ 0.04
MED28P7-201ENST00000456611 PLPPR3Q6T4P5 718 aa15.18■□□□□ 0.02
MED28P7-201ENST00000456611 RB1CC1Q8TDY2 1594 aa14.87□□□□□ -0.03
MED28P7-201ENST00000456611 ZCCHC6Q5VYS8 1495 aaKnown RBP14.84□□□□□ -0.03
MED28P7-201ENST00000456611 NACADO15069 1562 aa14.84□□□□□ -0.03
MED28P7-201ENST00000456611 UNC13AQ9UPW8 1703 aa14.82□□□□□ -0.04
MED28P7-201ENST00000456611 MYO15BQ96JP2 1530 aa14.74□□□□□ -0.05
MED28P7-201ENST00000456611 DCAF1Q9Y4B6 1507 aa14.7□□□□□ -0.06
MED28P7-201ENST00000456611 PPP6R1Q9UPN7 881 aa14.6□□□□□ -0.07
MED28P7-201ENST00000456611 BICRAQ9NZM4 1560 aa14.6□□□□□ -0.07
MED28P7-201ENST00000456611 DCAF8L2P0C7V8 631 aa14.59□□□□□ -0.07
MED28P7-201ENST00000456611 ADRA2BP18089 450 aa14.58□□□□□ -0.08
MED28P7-201ENST00000456611 SCRIBQ14160 1630 aa14.48□□□□□ -0.09
MED28P7-201ENST00000456611 PIAS4Q8N2W9 510 aaPredicted RBP14.41□□□□□ -0.1
MED28P7-201ENST00000456611 PABPN1Q86U42 306 aaKnown RBP eCLIP14.39□□□□□ -0.11
MED28P7-201ENST00000456611 DNAJC5BQ9UF47 199 aa14.29□□□□□ -0.12
MED28P7-201ENST00000456611 SHROOM4Q9ULL8 1493 aa14.25□□□□□ -0.13
MED28P7-201ENST00000456611 MSH5O43196 834 aa14.21□□□□□ -0.13
MED28P7-201ENST00000456611 EIF4G1Q04637 1599 aaKnown RBP14.12□□□□□ -0.15
MED28P7-201ENST00000456611 CC2D2AQ9P2K1 1620 aa14.08□□□□□ -0.15
MED28P7-201ENST00000456611 CECR2Q9BXF3 1484 aa13.89□□□□□ -0.19
MED28P7-201ENST00000456611 SMARCA4P51532 1647 aa13.86□□□□□ -0.19
MED28P7-201ENST00000456611 MROH2BQ7Z745 1585 aa13.74□□□□□ -0.21
MED28P7-201ENST00000456611 BAZ1AQ9NRL2 1556 aaPredicted RBP13.74□□□□□ -0.21
MED28P7-201ENST00000456611 PEG3Q9GZU2 1588 aa13.72□□□□□ -0.21
MED28P7-201ENST00000456611 ATAD2BQ9ULI0 1458 aa13.72□□□□□ -0.21
MED28P7-201ENST00000456611 HMGXB3Q12766 1538 aa13.68□□□□□ -0.22
MED28P7-201ENST00000456611 NCAPD3P42695 1498 aa13.67□□□□□ -0.22
MED28P7-201ENST00000456611 SMARCA2P51531 1590 aa13.66□□□□□ -0.22
MED28P7-201ENST00000456611 WIZO95785 1651 aa13.63□□□□□ -0.23
MED28P7-201ENST00000456611 POTEDQ86YR6 584 aa13.56□□□□□ -0.24
MED28P7-201ENST00000456611 BAZ1BQ9UIG0 1483 aaKnown RBP13.55□□□□□ -0.24
MED28P7-201ENST00000456611 RSF1Q96T23 1441 aaPredicted RBP13.5□□□□□ -0.25
MED28P7-201ENST00000456611 NESP48681 1621 aa13.46□□□□□ -0.25
MED28P7-201ENST00000456611 TOP2AP11388 1531 aaKnown RBP13.42□□□□□ -0.26
MED28P7-201ENST00000456611 KIF21AQ7Z4S6 1674 aa13.4□□□□□ -0.26
MED28P7-201ENST00000456611 SCAF1Q9H7N4 1312 aaKnown RBP13.37□□□□□ -0.27
MED28P7-201ENST00000456611 LAMC3Q9Y6N6 1575 aa13.36□□□□□ -0.27
MED28P7-201ENST00000456611 PPP4R3CPQ6ZMV5 832 aa13.35□□□□□ -0.27
MED28P7-201ENST00000456611 THOC2Q8NI27 1593 aaKnown RBP13.34□□□□□ -0.27
MED28P7-201ENST00000456611 PRDM2Q13029 1718 aa13.3□□□□□ -0.28
MED28P7-201ENST00000456611 MAPK8IP2Q13387 824 aaPredicted RBP13.28□□□□□ -0.28
MED28P7-201ENST00000456611 ERCC6Q03468 1493 aa13.24□□□□□ -0.29
MED28P7-201ENST00000456611 CADPSQ9ULU8 1353 aa13.23□□□□□ -0.29
MED28P7-201ENST00000456611 CCDC88BA6NC98 1476 aa13.23□□□□□ -0.29
MED28P7-201ENST00000456611 CFTRP13569 1480 aa13.21□□□□□ -0.3
MED28P7-201ENST00000456611 CUX2O14529 1486 aa13.17□□□□□ -0.3
MED28P7-201ENST00000456611 WDR62O43379 1518 aa13.14□□□□□ -0.31
MED28P7-201ENST00000456611 PDS5BQ9NTI5 1447 aa13.13□□□□□ -0.31
MED28P7-201ENST00000456611 FANCD2Q9BXW9 1451 aa13.13□□□□□ -0.31
MED28P7-201ENST00000456611 DMRT2Q9Y5R5 561 aa13.13□□□□□ -0.31
MED28P7-201ENST00000456611 MRC2Q9UBG0 1479 aa13.11□□□□□ -0.31
MED28P7-201ENST00000456611 CEP164Q9UPV0 1460 aa13.1□□□□□ -0.31
MED28P7-201ENST00000456611 URB2Q14146 1524 aaKnown RBP13.09□□□□□ -0.31
MED28P7-201ENST00000456611 CNKSR2Q8WXI2 1034 aa13.02□□□□□ -0.33
MED28P7-201ENST00000456611 NCBP3Q53F19 620 aaKnown RBP12.97□□□□□ -0.33
MED28P7-201ENST00000456611 SUPT5HO00267 1087 aaKnown RBP12.96□□□□□ -0.33
MED28P7-201ENST00000456611 TOPBP1Q92547 1522 aa12.96□□□□□ -0.33
MED28P7-201ENST00000456611 DNMBPQ6XZF7 1577 aa12.95□□□□□ -0.34
MED28P7-201ENST00000456611 TARBP1Q13395 1621 aaKnown RBP12.91□□□□□ -0.34
MED28P7-201ENST00000456611 CUX1P39880 1505 aa12.9□□□□□ -0.34
MED28P7-201ENST00000456611 WDR97A6NE52 1622 aa12.88□□□□□ -0.35
MED28P7-201ENST00000456611 ZNF608Q9ULD9 1512 aaPredicted RBP12.87□□□□□ -0.35
MED28P7-201ENST00000456611 EIF4G3O43432 1585 aaKnown RBP12.86□□□□□ -0.35
MED28P7-201ENST00000456611 POLA1P09884 1462 aaPredicted RBP12.85□□□□□ -0.35
MED28P7-201ENST00000456611 KCNA4P22459 653 aa12.84□□□□□ -0.35
MED28P7-201ENST00000456611 SYNJ1O43426 1573 aa12.81□□□□□ -0.36
MED28P7-201ENST00000456611 ABCC8Q09428 1581 aa12.81□□□□□ -0.36
MED28P7-201ENST00000456611 IFT140Q96RY7 1462 aa12.81□□□□□ -0.36
MED28P7-201ENST00000456611 BIVM-ERCC5R4GMW8 1640 aa12.8□□□□□ -0.36
MED28P7-201ENST00000456611 FGD5Q6ZNL6 1462 aa12.8□□□□□ -0.36
MED28P7-201ENST00000456611 RNF216Q9NWF9 866 aaPredicted RBP12.8□□□□□ -0.36
MED28P7-201ENST00000456611 RAD54L2Q9Y4B4 1467 aa12.79□□□□□ -0.36
MED28P7-201ENST00000456611 HOXD11P31277 338 aaPredicted RBP12.78□□□□□ -0.36
MED28P7-201ENST00000456611 NPM3O75607 178 aaKnown RBP12.76□□□□□ -0.37
MED28P7-201ENST00000456611 TOP2BQ02880 1626 aa12.76□□□□□ -0.37
MED28P7-201ENST00000456611 CHD1O14646 1710 aa12.76□□□□□ -0.37
MED28P7-201ENST00000456611 DNAJC5Q9H3Z4 198 aa12.75□□□□□ -0.37
MED28P7-201ENST00000456611 PBRM1Q86U86 1689 aa12.73□□□□□ -0.37
MED28P7-201ENST00000456611 ABCA5Q8WWZ7 1642 aa12.73□□□□□ -0.37
MED28P7-201ENST00000456611 AQRO60306 1485 aaKnown RBP eCLIP12.72□□□□□ -0.37
MED28P7-201ENST00000456611 SOGA1O94964 1423 aa12.68□□□□□ -0.38
MED28P7-201ENST00000456611 WRNQ14191 1432 aaPredicted RBP eCLIP12.67□□□□□ -0.38
MED28P7-201ENST00000456611 ABCA10Q8WWZ4 1543 aa12.67□□□□□ -0.38
MED28P7-201ENST00000456611 TDRD9Q8NDG6 1382 aaKnown RBP12.64□□□□□ -0.39
MED28P7-201ENST00000456611 SNAPC4Q5SXM2 1469 aa12.62□□□□□ -0.39
MED28P7-201ENST00000456611 DCAF8L1A6NGE4 600 aa12.6□□□□□ -0.39
MED28P7-201ENST00000456611 ADAMTS12P58397 1594 aa12.59□□□□□ -0.39
MED28P7-201ENST00000456611 GAPVD1Q14C86 1478 aa12.58□□□□□ -0.4
MED28P7-201ENST00000456611 GRIN2BQ13224 1484 aa12.57□□□□□ -0.4
MED28P7-201ENST00000456611 MAGI1Q96QZ7 1491 aaPredicted RBP12.56□□□□□ -0.4
MED28P7-201ENST00000456611 CLASP1Q7Z460 1538 aa12.56□□□□□ -0.4
MED28P7-201ENST00000456611 RIMBP3CA6NJZ7 1639 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms