RNA–Protein interactions for RNA: ENST00000456591.5

FAM228A-204, Transcript of family with sequence similarity 228 member A, humanhuman

TSL 3

Gene FAM228A, Length 809 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228A-204ENST00000456591 NISCHQ9Y2I1 1504 aa41.9■■■■■ 4.3
FAM228A-204ENST00000456591 CCDC180Q9P1Z9 1646 aa37.08■■■■□ 3.53
FAM228A-204ENST00000456591 ABCC9O60706 1549 aa36.08■■■■□ 3.37
FAM228A-204ENST00000456591 DCAF8L2P0C7V8 631 aa35.02■■■■□ 3.2
FAM228A-204ENST00000456591 ZCCHC6Q5VYS8 1495 aaKnown RBP34.94■■■■□ 3.18
FAM228A-204ENST00000456591 NACADO15069 1562 aa34.87■■■■□ 3.17
FAM228A-204ENST00000456591 RB1CC1Q8TDY2 1594 aa34.83■■■■□ 3.17
FAM228A-204ENST00000456591 MYO15BQ96JP2 1530 aa34.76■■■■□ 3.15
FAM228A-204ENST00000456591 DCAF1Q9Y4B6 1507 aa34.7■■■■□ 3.14
FAM228A-204ENST00000456591 UNC13AQ9UPW8 1703 aa33.88■■■■□ 3.01
FAM228A-204ENST00000456591 SCRIBQ14160 1630 aa33.86■■■■□ 3.01
FAM228A-204ENST00000456591 PABPN1Q86U42 306 aaKnown RBP eCLIP33.81■■■■□ 3
FAM228A-204ENST00000456591 BICRAQ9NZM4 1560 aa33.69■■■□□ 2.98
FAM228A-204ENST00000456591 SHROOM4Q9ULL8 1493 aa33.47■■■□□ 2.95
FAM228A-204ENST00000456591 DNAJC5BQ9UF47 199 aa32.87■■■□□ 2.85
FAM228A-204ENST00000456591 EIF4G1Q04637 1599 aaKnown RBP32.83■■■□□ 2.85
FAM228A-204ENST00000456591 CC2D2AQ9P2K1 1620 aa32.62■■■□□ 2.81
FAM228A-204ENST00000456591 CECR2Q9BXF3 1484 aa32.59■■■□□ 2.81
FAM228A-204ENST00000456591 BAZ1AQ9NRL2 1556 aaPredicted RBP32.48■■■□□ 2.79
FAM228A-204ENST00000456591 SMARCA4P51532 1647 aa32.41■■■□□ 2.78
FAM228A-204ENST00000456591 MROH2BQ7Z745 1585 aa32.27■■■□□ 2.76
FAM228A-204ENST00000456591 ATAD2BQ9ULI0 1458 aa32.23■■■□□ 2.75
FAM228A-204ENST00000456591 SMARCA2P51531 1590 aa32.21■■■□□ 2.75
FAM228A-204ENST00000456591 NCAPD3P42695 1498 aa32.19■■■□□ 2.74
FAM228A-204ENST00000456591 PEG3Q9GZU2 1588 aa32.11■■■□□ 2.73
FAM228A-204ENST00000456591 RSF1Q96T23 1441 aaPredicted RBP32.04■■■□□ 2.72
FAM228A-204ENST00000456591 HMGXB3Q12766 1538 aa32.01■■■□□ 2.72
FAM228A-204ENST00000456591 BAZ1BQ9UIG0 1483 aaKnown RBP31.98■■■□□ 2.71
FAM228A-204ENST00000456591 WIZO95785 1651 aa31.9■■■□□ 2.7
FAM228A-204ENST00000456591 TOP2AP11388 1531 aaKnown RBP31.63■■■□□ 2.65
FAM228A-204ENST00000456591 SUPT5HO00267 1087 aaKnown RBP31.49■■■□□ 2.63
FAM228A-204ENST00000456591 CADPSQ9ULU8 1353 aa31.29■■■□□ 2.6
FAM228A-204ENST00000456591 NESP48681 1621 aa31.27■■■□□ 2.6
FAM228A-204ENST00000456591 CCDC88BA6NC98 1476 aa31.27■■■□□ 2.6
FAM228A-204ENST00000456591 LAMC3Q9Y6N6 1575 aa31.26■■■□□ 2.6
FAM228A-204ENST00000456591 CFTRP13569 1480 aa31.13■■■□□ 2.57
FAM228A-204ENST00000456591 ERCC6Q03468 1493 aa31.13■■■□□ 2.57
FAM228A-204ENST00000456591 PDS5BQ9NTI5 1447 aa31.12■■■□□ 2.57
FAM228A-204ENST00000456591 FANCD2Q9BXW9 1451 aa30.89■■■□□ 2.54
FAM228A-204ENST00000456591 KIF21AQ7Z4S6 1674 aa30.84■■■□□ 2.53
FAM228A-204ENST00000456591 CEP164Q9UPV0 1460 aa30.83■■■□□ 2.53
FAM228A-204ENST00000456591 PRDM2Q13029 1718 aa30.77■■■□□ 2.52
FAM228A-204ENST00000456591 MRC2Q9UBG0 1479 aa30.73■■■□□ 2.51
FAM228A-204ENST00000456591 THOC2Q8NI27 1593 aaKnown RBP30.7■■■□□ 2.5
FAM228A-204ENST00000456591 CUX2O14529 1486 aa30.68■■■□□ 2.5
FAM228A-204ENST00000456591 WDR62O43379 1518 aa30.58■■■□□ 2.49
FAM228A-204ENST00000456591 URB2Q14146 1524 aaKnown RBP30.53■■■□□ 2.48
FAM228A-204ENST00000456591 ABCC8Q09428 1581 aa30.49■■■□□ 2.47
FAM228A-204ENST00000456591 TOPBP1Q92547 1522 aa30.41■■■□□ 2.46
FAM228A-204ENST00000456591 DNMBPQ6XZF7 1577 aa30.39■■■□□ 2.46
FAM228A-204ENST00000456591 CUX1P39880 1505 aa30.26■■■□□ 2.43
FAM228A-204ENST00000456591 WRNQ14191 1432 aaPredicted RBP eCLIP30.22■■■□□ 2.43
FAM228A-204ENST00000456591 IFT140Q96RY7 1462 aa30.19■■■□□ 2.42
FAM228A-204ENST00000456591 POLA1P09884 1462 aaPredicted RBP30.17■■■□□ 2.42
FAM228A-204ENST00000456591 FGD5Q6ZNL6 1462 aa30.14■■■□□ 2.42
FAM228A-204ENST00000456591 SOGA1O94964 1423 aa30.11■■■□□ 2.41
FAM228A-204ENST00000456591 TOP2BQ02880 1626 aa30.07■■■□□ 2.4
FAM228A-204ENST00000456591 SYNJ1O43426 1573 aa30.05■■■□□ 2.4
FAM228A-204ENST00000456591 BIVM-ERCC5R4GMW8 1640 aa30.04■■■□□ 2.4
FAM228A-204ENST00000456591 RAD54L2Q9Y4B4 1467 aa30.03■■■□□ 2.4
FAM228A-204ENST00000456591 TARBP1Q13395 1621 aaKnown RBP30.02■■■□□ 2.4
FAM228A-204ENST00000456591 ZNF608Q9ULD9 1512 aaPredicted RBP29.98■■■□□ 2.39
FAM228A-204ENST00000456591 TDRD9Q8NDG6 1382 aaKnown RBP29.9■■■□□ 2.38
FAM228A-204ENST00000456591 AQRO60306 1485 aaKnown RBP eCLIP29.88■■■□□ 2.37
FAM228A-204ENST00000456591 ABCA10Q8WWZ4 1543 aa29.87■■■□□ 2.37
FAM228A-204ENST00000456591 EIF4G3O43432 1585 aaKnown RBP29.85■■■□□ 2.37
FAM228A-204ENST00000456591 WDR97A6NE52 1622 aa29.85■■■□□ 2.37
FAM228A-204ENST00000456591 TRIM41Q8WV44 630 aa29.77■■■□□ 2.36
FAM228A-204ENST00000456591 GAPVD1Q14C86 1478 aa29.74■■■□□ 2.35
FAM228A-204ENST00000456591 GRIN2BQ13224 1484 aa29.71■■■□□ 2.35
FAM228A-204ENST00000456591 ABCA5Q8WWZ7 1642 aa29.67■■■□□ 2.34
FAM228A-204ENST00000456591 KIF27Q86VH2 1401 aa29.61■■■□□ 2.33
FAM228A-204ENST00000456591 SNAPC4Q5SXM2 1469 aa29.6■■■□□ 2.33
FAM228A-204ENST00000456591 MAGI1Q96QZ7 1491 aaPredicted RBP29.6■■■□□ 2.33
FAM228A-204ENST00000456591 FBLN2P98095 1184 aa29.55■■■□□ 2.32
FAM228A-204ENST00000456591 PBRM1Q86U86 1689 aa29.55■■■□□ 2.32
FAM228A-204ENST00000456591 OSCARQ8IYS5 282 aa29.54■■■□□ 2.32
FAM228A-204ENST00000456591 ERICH3Q5RHP9 1530 aa29.52■■■□□ 2.32
FAM228A-204ENST00000456591 CHIC1Q5VXU3 224 aa29.52■■■□□ 2.32
FAM228A-204ENST00000456591 CHMP7Q8WUX9 453 aaPredicted RBP29.52■■■□□ 2.32
FAM228A-204ENST00000456591 DNAJC5Q9H3Z4 198 aa29.48■■■□□ 2.31
FAM228A-204ENST00000456591 SYNJ2O15056 1496 aa29.48■■■□□ 2.31
FAM228A-204ENST00000456591 IGF1RP08069 1367 aa29.43■■■□□ 2.3
FAM228A-204ENST00000456591 FHAD1B1AJZ9 1412 aa29.43■■■□□ 2.3
FAM228A-204ENST00000456591 ADAMTS12P58397 1594 aa29.38■■■□□ 2.29
FAM228A-204ENST00000456591 CHD1O14646 1710 aa29.37■■■□□ 2.29
FAM228A-204ENST00000456591 RUSC2Q8N2Y8 1516 aa29.32■■■□□ 2.28
FAM228A-204ENST00000456591 GRIN2AQ12879 1464 aa29.3■■■□□ 2.28
FAM228A-204ENST00000456591 CUL7Q14999 1698 aa29.28■■■□□ 2.28
FAM228A-204ENST00000456591 CARMIL1Q5VZK9 1371 aa29.27■■■□□ 2.28
FAM228A-204ENST00000456591 EEA1Q15075 1411 aa29.22■■■□□ 2.27
FAM228A-204ENST00000456591 CSRNP3Q8WYN3 585 aa29.17■■■□□ 2.26
FAM228A-204ENST00000456591 NUP160Q12769 1436 aa29.16■■■□□ 2.26
FAM228A-204ENST00000456591 CLASP1Q7Z460 1538 aa29.12■■■□□ 2.25
FAM228A-204ENST00000456591 RAPGEF2Q9Y4G8 1499 aa29.11■■■□□ 2.25
FAM228A-204ENST00000456591 FAM9AQ8IZU1 332 aaPredicted RBP29.1■■■□□ 2.25
FAM228A-204ENST00000456591 CEP170Q5SW79 1584 aa29.09■■■□□ 2.25
FAM228A-204ENST00000456591 PRXQ9BXM0 1461 aa29.05■■■□□ 2.24
FAM228A-204ENST00000456591 KIAA0586Q9BVV6 1533 aa28.98■■■□□ 2.23
FAM228A-204ENST00000456591 ARHGEF11O15085 1522 aa28.95■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms