RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 NISCHQ9Y2I1 1504 aa42.62■■■■■ 4.41
FAM239A-203ENST00000456563 CCDC180Q9P1Z9 1646 aa37.65■■■■□ 3.62
FAM239A-203ENST00000456563 ABCC9O60706 1549 aa36.43■■■■□ 3.42
FAM239A-203ENST00000456563 ZCCHC6Q5VYS8 1495 aaKnown RBP35.6■■■■□ 3.29
FAM239A-203ENST00000456563 DCAF8L2P0C7V8 631 aa35.4■■■■□ 3.26
FAM239A-203ENST00000456563 NACADO15069 1562 aa35.34■■■■□ 3.25
FAM239A-203ENST00000456563 DCAF1Q9Y4B6 1507 aa35.32■■■■□ 3.24
FAM239A-203ENST00000456563 MYO15BQ96JP2 1530 aa35.31■■■■□ 3.24
FAM239A-203ENST00000456563 RB1CC1Q8TDY2 1594 aa35.24■■■■□ 3.23
FAM239A-203ENST00000456563 UNC13AQ9UPW8 1703 aa34.38■■■■□ 3.09
FAM239A-203ENST00000456563 SCRIBQ14160 1630 aa34.37■■■■□ 3.09
FAM239A-203ENST00000456563 BICRAQ9NZM4 1560 aa34.16■■■■□ 3.06
FAM239A-203ENST00000456563 PABPN1Q86U42 306 aaKnown RBP eCLIP34.13■■■■□ 3.05
FAM239A-203ENST00000456563 SHROOM4Q9ULL8 1493 aa33.88■■■■□ 3.01
FAM239A-203ENST00000456563 EIF4G1Q04637 1599 aaKnown RBP33.22■■■□□ 2.91
FAM239A-203ENST00000456563 CECR2Q9BXF3 1484 aa33.14■■■□□ 2.9
FAM239A-203ENST00000456563 DNAJC5BQ9UF47 199 aa33.06■■■□□ 2.88
FAM239A-203ENST00000456563 BAZ1AQ9NRL2 1556 aaPredicted RBP32.99■■■□□ 2.87
FAM239A-203ENST00000456563 CC2D2AQ9P2K1 1620 aa32.96■■■□□ 2.87
FAM239A-203ENST00000456563 SMARCA4P51532 1647 aa32.95■■■□□ 2.86
FAM239A-203ENST00000456563 MROH2BQ7Z745 1585 aa32.84■■■□□ 2.85
FAM239A-203ENST00000456563 ATAD2BQ9ULI0 1458 aa32.69■■■□□ 2.82
FAM239A-203ENST00000456563 SMARCA2P51531 1590 aa32.66■■■□□ 2.82
FAM239A-203ENST00000456563 PEG3Q9GZU2 1588 aa32.66■■■□□ 2.82
FAM239A-203ENST00000456563 RSF1Q96T23 1441 aaPredicted RBP32.65■■■□□ 2.82
FAM239A-203ENST00000456563 NCAPD3P42695 1498 aa32.62■■■□□ 2.81
FAM239A-203ENST00000456563 WIZO95785 1651 aa32.48■■■□□ 2.79
FAM239A-203ENST00000456563 HMGXB3Q12766 1538 aa32.47■■■□□ 2.79
FAM239A-203ENST00000456563 BAZ1BQ9UIG0 1483 aaKnown RBP32.42■■■□□ 2.78
FAM239A-203ENST00000456563 TOP2AP11388 1531 aaKnown RBP32.19■■■□□ 2.74
FAM239A-203ENST00000456563 SUPT5HO00267 1087 aaKnown RBP32.13■■■□□ 2.73
FAM239A-203ENST00000456563 CCDC88BA6NC98 1476 aa31.82■■■□□ 2.68
FAM239A-203ENST00000456563 CADPSQ9ULU8 1353 aa31.69■■■□□ 2.66
FAM239A-203ENST00000456563 LAMC3Q9Y6N6 1575 aa31.65■■■□□ 2.66
FAM239A-203ENST00000456563 NESP48681 1621 aa31.65■■■□□ 2.66
FAM239A-203ENST00000456563 CFTRP13569 1480 aa31.59■■■□□ 2.65
FAM239A-203ENST00000456563 PDS5BQ9NTI5 1447 aa31.45■■■□□ 2.63
FAM239A-203ENST00000456563 ERCC6Q03468 1493 aa31.36■■■□□ 2.61
FAM239A-203ENST00000456563 PRDM2Q13029 1718 aa31.3■■■□□ 2.6
FAM239A-203ENST00000456563 FANCD2Q9BXW9 1451 aa31.3■■■□□ 2.6
FAM239A-203ENST00000456563 KIF21AQ7Z4S6 1674 aa31.25■■■□□ 2.59
FAM239A-203ENST00000456563 CEP164Q9UPV0 1460 aa31.21■■■□□ 2.59
FAM239A-203ENST00000456563 MRC2Q9UBG0 1479 aa31.08■■■□□ 2.57
FAM239A-203ENST00000456563 THOC2Q8NI27 1593 aaKnown RBP31.07■■■□□ 2.56
FAM239A-203ENST00000456563 WDR62O43379 1518 aa30.96■■■□□ 2.55
FAM239A-203ENST00000456563 URB2Q14146 1524 aaKnown RBP30.96■■■□□ 2.55
FAM239A-203ENST00000456563 ABCC8Q09428 1581 aa30.9■■■□□ 2.54
FAM239A-203ENST00000456563 CUX2O14529 1486 aa30.89■■■□□ 2.54
FAM239A-203ENST00000456563 TOPBP1Q92547 1522 aa30.85■■■□□ 2.53
FAM239A-203ENST00000456563 DNMBPQ6XZF7 1577 aa30.84■■■□□ 2.53
FAM239A-203ENST00000456563 CUX1P39880 1505 aa30.78■■■□□ 2.52
FAM239A-203ENST00000456563 WRNQ14191 1432 aaPredicted RBP eCLIP30.77■■■□□ 2.52
FAM239A-203ENST00000456563 TOP2BQ02880 1626 aa30.63■■■□□ 2.49
FAM239A-203ENST00000456563 SYNJ1O43426 1573 aa30.62■■■□□ 2.49
FAM239A-203ENST00000456563 POLA1P09884 1462 aaPredicted RBP30.62■■■□□ 2.49
FAM239A-203ENST00000456563 BIVM-ERCC5R4GMW8 1640 aa30.61■■■□□ 2.49
FAM239A-203ENST00000456563 FGD5Q6ZNL6 1462 aa30.6■■■□□ 2.49
FAM239A-203ENST00000456563 IFT140Q96RY7 1462 aa30.56■■■□□ 2.48
FAM239A-203ENST00000456563 SOGA1O94964 1423 aa30.52■■■□□ 2.48
FAM239A-203ENST00000456563 RAD54L2Q9Y4B4 1467 aa30.48■■■□□ 2.47
FAM239A-203ENST00000456563 TARBP1Q13395 1621 aaKnown RBP30.46■■■□□ 2.47
FAM239A-203ENST00000456563 ZNF608Q9ULD9 1512 aaPredicted RBP30.36■■■□□ 2.45
FAM239A-203ENST00000456563 TRIM41Q8WV44 630 aa30.35■■■□□ 2.45
FAM239A-203ENST00000456563 ABCA10Q8WWZ4 1543 aa30.35■■■□□ 2.45
FAM239A-203ENST00000456563 WDR97A6NE52 1622 aa30.29■■■□□ 2.44
FAM239A-203ENST00000456563 TDRD9Q8NDG6 1382 aaKnown RBP30.28■■■□□ 2.44
FAM239A-203ENST00000456563 CHIC1Q5VXU3 224 aa30.28■■■□□ 2.44
FAM239A-203ENST00000456563 AQRO60306 1485 aaKnown RBP eCLIP30.25■■■□□ 2.43
FAM239A-203ENST00000456563 EIF4G3O43432 1585 aaKnown RBP30.24■■■□□ 2.43
FAM239A-203ENST00000456563 GAPVD1Q14C86 1478 aa30.16■■■□□ 2.42
FAM239A-203ENST00000456563 ABCA5Q8WWZ7 1642 aa30.15■■■□□ 2.42
FAM239A-203ENST00000456563 GRIN2BQ13224 1484 aa30.1■■■□□ 2.41
FAM239A-203ENST00000456563 KIF27Q86VH2 1401 aa30.09■■■□□ 2.41
FAM239A-203ENST00000456563 PBRM1Q86U86 1689 aa30.01■■■□□ 2.39
FAM239A-203ENST00000456563 ERICH3Q5RHP9 1530 aa29.99■■■□□ 2.39
FAM239A-203ENST00000456563 SNAPC4Q5SXM2 1469 aa29.98■■■□□ 2.39
FAM239A-203ENST00000456563 MAGI1Q96QZ7 1491 aaPredicted RBP29.98■■■□□ 2.39
FAM239A-203ENST00000456563 IGF1RP08069 1367 aa29.93■■■□□ 2.38
FAM239A-203ENST00000456563 RUSC2Q8N2Y8 1516 aa29.93■■■□□ 2.38
FAM239A-203ENST00000456563 SYNJ2O15056 1496 aa29.86■■■□□ 2.37
FAM239A-203ENST00000456563 FHAD1B1AJZ9 1412 aa29.85■■■□□ 2.37
FAM239A-203ENST00000456563 ADAMTS12P58397 1594 aa29.83■■■□□ 2.37
FAM239A-203ENST00000456563 EEA1Q15075 1411 aa29.83■■■□□ 2.37
FAM239A-203ENST00000456563 CHMP7Q8WUX9 453 aaPredicted RBP29.81■■■□□ 2.36
FAM239A-203ENST00000456563 FBLN2P98095 1184 aa29.79■■■□□ 2.36
FAM239A-203ENST00000456563 CUL7Q14999 1698 aa29.77■■■□□ 2.36
FAM239A-203ENST00000456563 CARMIL1Q5VZK9 1371 aa29.76■■■□□ 2.35
FAM239A-203ENST00000456563 CHD1O14646 1710 aa29.74■■■□□ 2.35
FAM239A-203ENST00000456563 CSRNP3Q8WYN3 585 aa29.73■■■□□ 2.35
FAM239A-203ENST00000456563 OSCARQ8IYS5 282 aa29.71■■■□□ 2.35
FAM239A-203ENST00000456563 GRIN2AQ12879 1464 aa29.71■■■□□ 2.35
FAM239A-203ENST00000456563 FAM9AQ8IZU1 332 aaPredicted RBP29.67■■■□□ 2.34
FAM239A-203ENST00000456563 PRXQ9BXM0 1461 aa29.64■■■□□ 2.34
FAM239A-203ENST00000456563 RAPGEF2Q9Y4G8 1499 aa29.61■■■□□ 2.33
FAM239A-203ENST00000456563 NUP160Q12769 1436 aa29.58■■■□□ 2.33
FAM239A-203ENST00000456563 CEP170Q5SW79 1584 aa29.52■■■□□ 2.32
FAM239A-203ENST00000456563 CLASP1Q7Z460 1538 aa29.49■■■□□ 2.31
FAM239A-203ENST00000456563 DNAJC5Q9H3Z4 198 aa29.45■■■□□ 2.31
FAM239A-203ENST00000456563 KIF21BO75037 1637 aa29.45■■■□□ 2.3
FAM239A-203ENST00000456563 KIAA0586Q9BVV6 1533 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms