RNA–Protein interactions for RNA: ENST00000456492.1

NME1-204, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 2

Gene NME1, Length 510 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-204ENST00000456492 AEBP2Q6ZN18 517 aaPredicted RBP13.73□□□□□ -0.21
NME1-204ENST00000456492 CHIC1Q5VXU3 224 aa13.19□□□□□ -0.3
NME1-204ENST00000456492 NISCHQ9Y2I1 1504 aa12.15□□□□□ -0.46
NME1-204ENST00000456492 SENP3Q9H4L4 574 aaPredicted RBP11.77□□□□□ -0.53
NME1-204ENST00000456492 PHF23Q9BUL5 403 aaPredicted RBP11.6□□□□□ -0.55
NME1-204ENST00000456492 ABCC9O60706 1549 aa11.03□□□□□ -0.64
NME1-204ENST00000456492 CCDC180Q9P1Z9 1646 aa11.01□□□□□ -0.65
NME1-204ENST00000456492 FOXD1Q16676 465 aa10.9□□□□□ -0.66
NME1-204ENST00000456492 PLPPR3Q6T4P5 718 aa10.61□□□□□ -0.71
NME1-204ENST00000456492 RB1CC1Q8TDY2 1594 aa10.54□□□□□ -0.72
NME1-204ENST00000456492 NACADO15069 1562 aa10.45□□□□□ -0.74
NME1-204ENST00000456492 DNAJC5BQ9UF47 199 aa10.38□□□□□ -0.75
NME1-204ENST00000456492 DCAF8L2P0C7V8 631 aa10.33□□□□□ -0.76
NME1-204ENST00000456492 MYO15BQ96JP2 1530 aa10.28□□□□□ -0.76
NME1-204ENST00000456492 PPP6R1Q9UPN7 881 aa10.25□□□□□ -0.77
NME1-204ENST00000456492 PABPN1Q86U42 306 aaKnown RBP eCLIP10.24□□□□□ -0.77
NME1-204ENST00000456492 MSH5O43196 834 aa10.23□□□□□ -0.77
NME1-204ENST00000456492 UNC13AQ9UPW8 1703 aa10.22□□□□□ -0.77
NME1-204ENST00000456492 ADRA2BP18089 450 aa10.22□□□□□ -0.77
NME1-204ENST00000456492 PIAS4Q8N2W9 510 aaPredicted RBP10.21□□□□□ -0.77
NME1-204ENST00000456492 SHROOM4Q9ULL8 1493 aa10.14□□□□□ -0.79
NME1-204ENST00000456492 BICRAQ9NZM4 1560 aa10.13□□□□□ -0.79
NME1-204ENST00000456492 DCAF1Q9Y4B6 1507 aa10.08□□□□□ -0.8
NME1-204ENST00000456492 ZCCHC6Q5VYS8 1495 aaKnown RBP10.03□□□□□ -0.8
NME1-204ENST00000456492 DNAJC5Q9H3Z4 198 aa10.01□□□□□ -0.81
NME1-204ENST00000456492 CECR2Q9BXF3 1484 aa9.98□□□□□ -0.81
NME1-204ENST00000456492 CC2D2AQ9P2K1 1620 aa9.98□□□□□ -0.81
NME1-204ENST00000456492 EIF4G1Q04637 1599 aaKnown RBP9.94□□□□□ -0.82
NME1-204ENST00000456492 SCRIBQ14160 1630 aa9.93□□□□□ -0.82
NME1-204ENST00000456492 POTEDQ86YR6 584 aa9.75□□□□□ -0.85
NME1-204ENST00000456492 CUX2O14529 1486 aa9.65□□□□□ -0.87
NME1-204ENST00000456492 NCAPD3P42695 1498 aa9.61□□□□□ -0.87
NME1-204ENST00000456492 ERCC6Q03468 1493 aa9.61□□□□□ -0.87
NME1-204ENST00000456492 SMARCA2P51531 1590 aa9.57□□□□□ -0.88
NME1-204ENST00000456492 HMGXB3Q12766 1538 aa9.54□□□□□ -0.88
NME1-204ENST00000456492 ATAD2BQ9ULI0 1458 aa9.53□□□□□ -0.88
NME1-204ENST00000456492 SMARCA4P51532 1647 aa9.5□□□□□ -0.89
NME1-204ENST00000456492 BAZ1AQ9NRL2 1556 aaPredicted RBP9.48□□□□□ -0.89
NME1-204ENST00000456492 BAZ1BQ9UIG0 1483 aaKnown RBP9.47□□□□□ -0.89
NME1-204ENST00000456492 SCAF1Q9H7N4 1312 aaKnown RBP9.46□□□□□ -0.9
NME1-204ENST00000456492 LAMC3Q9Y6N6 1575 aa9.45□□□□□ -0.9
NME1-204ENST00000456492 PEG3Q9GZU2 1588 aa9.42□□□□□ -0.9
NME1-204ENST00000456492 PDS5BQ9NTI5 1447 aa9.41□□□□□ -0.9
NME1-204ENST00000456492 NESP48681 1621 aa9.4□□□□□ -0.9
NME1-204ENST00000456492 THOC2Q8NI27 1593 aaKnown RBP9.37□□□□□ -0.91
NME1-204ENST00000456492 MAPK8IP2Q13387 824 aaPredicted RBP9.35□□□□□ -0.91
NME1-204ENST00000456492 DMRT2Q9Y5R5 561 aa9.34□□□□□ -0.91
NME1-204ENST00000456492 CADPSQ9ULU8 1353 aa9.32□□□□□ -0.92
NME1-204ENST00000456492 KIF21AQ7Z4S6 1674 aa9.32□□□□□ -0.92
NME1-204ENST00000456492 MROH2BQ7Z745 1585 aa9.31□□□□□ -0.92
NME1-204ENST00000456492 MRC2Q9UBG0 1479 aa9.28□□□□□ -0.92
NME1-204ENST00000456492 PPP4R3CPQ6ZMV5 832 aa9.28□□□□□ -0.92
NME1-204ENST00000456492 WDR62O43379 1518 aa9.26□□□□□ -0.93
NME1-204ENST00000456492 CEP164Q9UPV0 1460 aa9.24□□□□□ -0.93
NME1-204ENST00000456492 TRIM41Q8WV44 630 aa9.24□□□□□ -0.93
NME1-204ENST00000456492 OSCARQ8IYS5 282 aa9.21□□□□□ -0.94
NME1-204ENST00000456492 WIZO95785 1651 aa9.2□□□□□ -0.94
NME1-204ENST00000456492 FANCD2Q9BXW9 1451 aa9.19□□□□□ -0.94
NME1-204ENST00000456492 CFTRP13569 1480 aa9.17□□□□□ -0.94
NME1-204ENST00000456492 TOP2AP11388 1531 aaKnown RBP9.12□□□□□ -0.95
NME1-204ENST00000456492 CNKSR2Q8WXI2 1034 aa9.12□□□□□ -0.95
NME1-204ENST00000456492 PRDM2Q13029 1718 aa9.11□□□□□ -0.95
NME1-204ENST00000456492 RSF1Q96T23 1441 aaPredicted RBP9.1□□□□□ -0.95
NME1-204ENST00000456492 ABCC8Q09428 1581 aa9.08□□□□□ -0.96
NME1-204ENST00000456492 IFT140Q96RY7 1462 aa9.08□□□□□ -0.96
NME1-204ENST00000456492 URB2Q14146 1524 aaKnown RBP9.07□□□□□ -0.96
NME1-204ENST00000456492 HOXD11P31277 338 aaPredicted RBP9.05□□□□□ -0.96
NME1-204ENST00000456492 RNF216Q9NWF9 866 aaPredicted RBP9.02□□□□□ -0.97
NME1-204ENST00000456492 NCBP3Q53F19 620 aaKnown RBP9.01□□□□□ -0.97
NME1-204ENST00000456492 RIMBP3CA6NJZ7 1639 aa9.01□□□□□ -0.97
NME1-204ENST00000456492 RIMBP3BA6NNM3 1639 aa9.01□□□□□ -0.97
NME1-204ENST00000456492 RIMBP3Q9UFD9 1639 aa9.01□□□□□ -0.97
NME1-204ENST00000456492 TOPBP1Q92547 1522 aa9□□□□□ -0.97
NME1-204ENST00000456492 CCDC88BA6NC98 1476 aa8.99□□□□□ -0.97
NME1-204ENST00000456492 ARHGEF11O15085 1522 aa8.98□□□□□ -0.97
NME1-204ENST00000456492 DNMBPQ6XZF7 1577 aa8.98□□□□□ -0.97
NME1-204ENST00000456492 ZNF608Q9ULD9 1512 aaPredicted RBP8.96□□□□□ -0.97
NME1-204ENST00000456492 CYB5RLQ6IPT4 315 aa8.95□□□□□ -0.98
NME1-204ENST00000456492 EIF4G3O43432 1585 aaKnown RBP8.95□□□□□ -0.98
NME1-204ENST00000456492 FBLN2P98095 1184 aa8.93□□□□□ -0.98
NME1-204ENST00000456492 WDR97A6NE52 1622 aa8.93□□□□□ -0.98
NME1-204ENST00000456492 TRHP20396 242 aaPredicted RBP8.92□□□□□ -0.98
NME1-204ENST00000456492 CHD1O14646 1710 aa8.91□□□□□ -0.98
NME1-204ENST00000456492 TARBP1Q13395 1621 aaKnown RBP8.91□□□□□ -0.98
NME1-204ENST00000456492 ILDR1Q86SU0 546 aaPredicted RBP8.9□□□□□ -0.98
NME1-204ENST00000456492 AQRO60306 1485 aaKnown RBP eCLIP8.89□□□□□ -0.991e-8■■■■□ 19.3
NME1-204ENST00000456492 POLA1P09884 1462 aaPredicted RBP8.89□□□□□ -0.99
NME1-204ENST00000456492 SOGA1O94964 1423 aa8.88□□□□□ -0.99
NME1-204ENST00000456492 DCAF8L1A6NGE4 600 aa8.88□□□□□ -0.99
NME1-204ENST00000456492 CHMP7Q8WUX9 453 aaPredicted RBP8.88□□□□□ -0.99
NME1-204ENST00000456492 SYNJ1O43426 1573 aa8.86□□□□□ -0.99
NME1-204ENST00000456492 MAGI1Q96QZ7 1491 aaPredicted RBP8.86□□□□□ -0.99
NME1-204ENST00000456492 ARAP1Q96P48 1450 aa8.85□□□□□ -0.99
NME1-204ENST00000456492 TDRD9Q8NDG6 1382 aaKnown RBP8.84□□□□□ -0.99
NME1-204ENST00000456492 GRIN2BQ13224 1484 aa8.83□□□□□ -1
NME1-204ENST00000456492 SNAPC4Q5SXM2 1469 aa8.82□□□□□ -1
NME1-204ENST00000456492 RAD54L2Q9Y4B4 1467 aa8.82□□□□□ -1
NME1-204ENST00000456492 NPM3O75607 178 aaKnown RBP8.81□□□□□ -1
NME1-204ENST00000456492 SYNJ2O15056 1496 aa8.81□□□□□ -1
NME1-204ENST00000456492 FGD5Q6ZNL6 1462 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms