RNA–Protein interactions for RNA: ENST00000455894.1

LINC00378-202, long intergenic non-protein coding RNA 378, humanhuman

TSL 5

Gene LINC00378, Length 324 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00378-202ENST00000455894 NISCHQ9Y2I1 1504 aa31.17■■■□□ 2.58
LINC00378-202ENST00000455894 CCDC180Q9P1Z9 1646 aa27.61■■■□□ 2.01
LINC00378-202ENST00000455894 ABCC9O60706 1549 aa26.89■■□□□ 1.89
LINC00378-202ENST00000455894 DCAF8L2P0C7V8 631 aa26.02■■□□□ 1.76
LINC00378-202ENST00000455894 ZCCHC6Q5VYS8 1495 aaKnown RBP25.98■■□□□ 1.75
LINC00378-202ENST00000455894 NACADO15069 1562 aa25.94■■□□□ 1.74
LINC00378-202ENST00000455894 RB1CC1Q8TDY2 1594 aa25.93■■□□□ 1.74
LINC00378-202ENST00000455894 MYO15BQ96JP2 1530 aa25.84■■□□□ 1.73
LINC00378-202ENST00000455894 DCAF1Q9Y4B6 1507 aa25.79■■□□□ 1.72
LINC00378-202ENST00000455894 UNC13AQ9UPW8 1703 aa25.32■■□□□ 1.64
LINC00378-202ENST00000455894 SCRIBQ14160 1630 aa25.22■■□□□ 1.63
LINC00378-202ENST00000455894 PABPN1Q86U42 306 aaKnown RBP eCLIP25.17■■□□□ 1.62
LINC00378-202ENST00000455894 BICRAQ9NZM4 1560 aa25.12■■□□□ 1.61
LINC00378-202ENST00000455894 SHROOM4Q9ULL8 1493 aa24.89■■□□□ 1.57
LINC00378-202ENST00000455894 DNAJC5BQ9UF47 199 aa24.53■■□□□ 1.52
LINC00378-202ENST00000455894 EIF4G1Q04637 1599 aaKnown RBP24.46■■□□□ 1.51
LINC00378-202ENST00000455894 CC2D2AQ9P2K1 1620 aa24.32■■□□□ 1.48
LINC00378-202ENST00000455894 CECR2Q9BXF3 1484 aa24.26■■□□□ 1.47
LINC00378-202ENST00000455894 BAZ1AQ9NRL2 1556 aaPredicted RBP24.15■■□□□ 1.46
LINC00378-202ENST00000455894 SMARCA4P51532 1647 aa24.13■■□□□ 1.45
LINC00378-202ENST00000455894 MROH2BQ7Z745 1585 aa24.02■■□□□ 1.44
LINC00378-202ENST00000455894 ATAD2BQ9ULI0 1458 aa23.99■■□□□ 1.43
LINC00378-202ENST00000455894 SMARCA2P51531 1590 aa23.95■■□□□ 1.43
LINC00378-202ENST00000455894 NCAPD3P42695 1498 aa23.94■■□□□ 1.42
LINC00378-202ENST00000455894 PEG3Q9GZU2 1588 aa23.9■■□□□ 1.42
LINC00378-202ENST00000455894 HMGXB3Q12766 1538 aa23.83■■□□□ 1.41
LINC00378-202ENST00000455894 RSF1Q96T23 1441 aaPredicted RBP23.82■■□□□ 1.4
LINC00378-202ENST00000455894 BAZ1BQ9UIG0 1483 aaKnown RBP23.8■■□□□ 1.4
LINC00378-202ENST00000455894 WIZO95785 1651 aa23.76■■□□□ 1.39
LINC00378-202ENST00000455894 TOP2AP11388 1531 aaKnown RBP23.53■■□□□ 1.36
LINC00378-202ENST00000455894 SUPT5HO00267 1087 aaKnown RBP23.38■■□□□ 1.33
LINC00378-202ENST00000455894 NESP48681 1621 aa23.3■■□□□ 1.32
LINC00378-202ENST00000455894 CADPSQ9ULU8 1353 aa23.27■■□□□ 1.32
LINC00378-202ENST00000455894 LAMC3Q9Y6N6 1575 aa23.27■■□□□ 1.32
LINC00378-202ENST00000455894 CCDC88BA6NC98 1476 aa23.27■■□□□ 1.32
LINC00378-202ENST00000455894 ERCC6Q03468 1493 aa23.17■■□□□ 1.3
LINC00378-202ENST00000455894 CFTRP13569 1480 aa23.14■■□□□ 1.29
LINC00378-202ENST00000455894 PDS5BQ9NTI5 1447 aa23.14■■□□□ 1.29
LINC00378-202ENST00000455894 KIF21AQ7Z4S6 1674 aa23.02■■□□□ 1.28
LINC00378-202ENST00000455894 FANCD2Q9BXW9 1451 aa22.98■■□□□ 1.27
LINC00378-202ENST00000455894 PRDM2Q13029 1718 aa22.96■■□□□ 1.27
LINC00378-202ENST00000455894 CEP164Q9UPV0 1460 aa22.93■■□□□ 1.26
LINC00378-202ENST00000455894 THOC2Q8NI27 1593 aaKnown RBP22.9■■□□□ 1.26
LINC00378-202ENST00000455894 MRC2Q9UBG0 1479 aa22.87■■□□□ 1.25
LINC00378-202ENST00000455894 CUX2O14529 1486 aa22.85■■□□□ 1.25
LINC00378-202ENST00000455894 WDR62O43379 1518 aa22.77■■□□□ 1.24
LINC00378-202ENST00000455894 URB2Q14146 1524 aaKnown RBP22.74■■□□□ 1.23
LINC00378-202ENST00000455894 ABCC8Q09428 1581 aa22.66■■□□□ 1.22
LINC00378-202ENST00000455894 TOPBP1Q92547 1522 aa22.64■■□□□ 1.21
LINC00378-202ENST00000455894 DNMBPQ6XZF7 1577 aa22.63■■□□□ 1.21
LINC00378-202ENST00000455894 CUX1P39880 1505 aa22.52■■□□□ 1.2
LINC00378-202ENST00000455894 WRNQ14191 1432 aaPredicted RBP eCLIP22.46■■□□□ 1.19
LINC00378-202ENST00000455894 IFT140Q96RY7 1462 aa22.46■■□□□ 1.19
LINC00378-202ENST00000455894 POLA1P09884 1462 aaPredicted RBP22.45■■□□□ 1.18
LINC00378-202ENST00000455894 FGD5Q6ZNL6 1462 aa22.42■■□□□ 1.18
LINC00378-202ENST00000455894 SOGA1O94964 1423 aa22.39■■□□□ 1.17
LINC00378-202ENST00000455894 SYNJ1O43426 1573 aa22.38■■□□□ 1.17
LINC00378-202ENST00000455894 RAD54L2Q9Y4B4 1467 aa22.37■■□□□ 1.17
LINC00378-202ENST00000455894 TOP2BQ02880 1626 aa22.37■■□□□ 1.17
LINC00378-202ENST00000455894 BIVM-ERCC5R4GMW8 1640 aa22.36■■□□□ 1.17
LINC00378-202ENST00000455894 TARBP1Q13395 1621 aaKnown RBP22.35■■□□□ 1.17
LINC00378-202ENST00000455894 ZNF608Q9ULD9 1512 aaPredicted RBP22.33■■□□□ 1.17
LINC00378-202ENST00000455894 AQRO60306 1485 aaKnown RBP eCLIP22.25■■□□□ 1.15
LINC00378-202ENST00000455894 EIF4G3O43432 1585 aaKnown RBP22.24■■□□□ 1.15
LINC00378-202ENST00000455894 TDRD9Q8NDG6 1382 aaKnown RBP22.24■■□□□ 1.15
LINC00378-202ENST00000455894 ABCA10Q8WWZ4 1543 aa22.22■■□□□ 1.15
LINC00378-202ENST00000455894 WDR97A6NE52 1622 aa22.2■■□□□ 1.14
LINC00378-202ENST00000455894 GAPVD1Q14C86 1478 aa22.12■■□□□ 1.13
LINC00378-202ENST00000455894 ABCA5Q8WWZ7 1642 aa22.09■■□□□ 1.13
LINC00378-202ENST00000455894 GRIN2BQ13224 1484 aa22.09■■□□□ 1.13
LINC00378-202ENST00000455894 TRIM41Q8WV44 630 aa22.08■■□□□ 1.13
LINC00378-202ENST00000455894 SNAPC4Q5SXM2 1469 aa22.03■■□□□ 1.12
LINC00378-202ENST00000455894 PBRM1Q86U86 1689 aa22.03■■□□□ 1.12
LINC00378-202ENST00000455894 MAGI1Q96QZ7 1491 aaPredicted RBP22.01■■□□□ 1.11
LINC00378-202ENST00000455894 KIF27Q86VH2 1401 aa21.98■■□□□ 1.11
LINC00378-202ENST00000455894 FBLN2P98095 1184 aa21.97■■□□□ 1.11
LINC00378-202ENST00000455894 OSCARQ8IYS5 282 aa21.97■■□□□ 1.11
LINC00378-202ENST00000455894 DNAJC5Q9H3Z4 198 aa21.97■■□□□ 1.11
LINC00378-202ENST00000455894 ERICH3Q5RHP9 1530 aa21.96■■□□□ 1.11
LINC00378-202ENST00000455894 CHMP7Q8WUX9 453 aaPredicted RBP21.94■■□□□ 1.1
LINC00378-202ENST00000455894 CHD1O14646 1710 aa21.92■■□□□ 1.1
LINC00378-202ENST00000455894 SYNJ2O15056 1496 aa21.92■■□□□ 1.1
LINC00378-202ENST00000455894 CHIC1Q5VXU3 224 aa21.92■■□□□ 1.1
LINC00378-202ENST00000455894 IGF1RP08069 1367 aa21.88■■□□□ 1.09
LINC00378-202ENST00000455894 ADAMTS12P58397 1594 aa21.88■■□□□ 1.09
LINC00378-202ENST00000455894 FHAD1B1AJZ9 1412 aa21.88■■□□□ 1.09
LINC00378-202ENST00000455894 RUSC2Q8N2Y8 1516 aa21.82■■□□□ 1.08
LINC00378-202ENST00000455894 GRIN2AQ12879 1464 aa21.8■■□□□ 1.08
LINC00378-202ENST00000455894 CUL7Q14999 1698 aa21.78■■□□□ 1.08
LINC00378-202ENST00000455894 CARMIL1Q5VZK9 1371 aa21.75■■□□□ 1.07
LINC00378-202ENST00000455894 NUP160Q12769 1436 aa21.7■■□□□ 1.06
LINC00378-202ENST00000455894 CLASP1Q7Z460 1538 aa21.7■■□□□ 1.06
LINC00378-202ENST00000455894 EEA1Q15075 1411 aa21.68■■□□□ 1.06
LINC00378-202ENST00000455894 CEP170Q5SW79 1584 aa21.67■■□□□ 1.06
LINC00378-202ENST00000455894 CSRNP3Q8WYN3 585 aa21.65■■□□□ 1.06
LINC00378-202ENST00000455894 RAPGEF2Q9Y4G8 1499 aa21.64■■□□□ 1.05
LINC00378-202ENST00000455894 FAM9AQ8IZU1 332 aaPredicted RBP21.61■■□□□ 1.05
LINC00378-202ENST00000455894 PRXQ9BXM0 1461 aa21.59■■□□□ 1.05
LINC00378-202ENST00000455894 ARHGEF11O15085 1522 aa21.57■■□□□ 1.04
LINC00378-202ENST00000455894 RIMBP3CA6NJZ7 1639 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms