RNA–Protein interactions for RNA: ENST00000454993.6

GRIK5-203, Transcript of glutamate ionotropic receptor kainate type subunit 5, humanhuman

TSL 1 (best)

Gene GRIK5, Length 2,370 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK5-203ENST00000454993 NISCHQ9Y2I1 1504 aa45.49■■■■■ 4.87
GRIK5-203ENST00000454993 CCDC180Q9P1Z9 1646 aa39.03■■■■□ 3.84
GRIK5-203ENST00000454993 ZCCHC6Q5VYS8 1495 aaKnown RBP38.43■■■■□ 3.74
GRIK5-203ENST00000454993 SHROOM4Q9ULL8 1493 aa38.11■■■■□ 3.69
GRIK5-203ENST00000454993 DCAF8L2P0C7V8 631 aa37.71■■■■□ 3.63
GRIK5-203ENST00000454993 DCAF1Q9Y4B6 1507 aa37.48■■■■□ 3.59
GRIK5-203ENST00000454993 SUPT5HO00267 1087 aaKnown RBP37.17■■■■□ 3.54
GRIK5-203ENST00000454993 ABCC9O60706 1549 aa36.9■■■■□ 3.5
GRIK5-203ENST00000454993 MYO15BQ96JP2 1530 aa36.59■■■■□ 3.45
GRIK5-203ENST00000454993 SCRIBQ14160 1630 aa36.26■■■■□ 3.39
GRIK5-203ENST00000454993 NACADO15069 1562 aa36.11■■■■□ 3.37
GRIK5-203ENST00000454993 CHIC1Q5VXU3 224 aa36.1■■■■□ 3.37
GRIK5-203ENST00000454993 RSF1Q96T23 1441 aaPredicted RBP35.77■■■■□ 3.32
GRIK5-203ENST00000454993 RB1CC1Q8TDY2 1594 aa35.77■■■■□ 3.32
GRIK5-203ENST00000454993 CECR2Q9BXF3 1484 aa35.39■■■■□ 3.26
GRIK5-203ENST00000454993 MROH2BQ7Z745 1585 aa35.28■■■■□ 3.24
GRIK5-203ENST00000454993 UNC13AQ9UPW8 1703 aa35.28■■■■□ 3.24
GRIK5-203ENST00000454993 PABPN1Q86U42 306 aaKnown RBP eCLIP35.08■■■■□ 3.21
GRIK5-203ENST00000454993 WIZO95785 1651 aa35.07■■■■□ 3.2
GRIK5-203ENST00000454993 BAZ1AQ9NRL2 1556 aaPredicted RBP34.99■■■■□ 3.19
GRIK5-203ENST00000454993 LOC105371045A0A1W2PR82 267 aa34.87■■■■□ 3.17
GRIK5-203ENST00000454993 BICRAQ9NZM4 1560 aa34.85■■■■□ 3.17
GRIK5-203ENST00000454993 TRIM41Q8WV44 630 aa34.76■■■■□ 3.16
GRIK5-203ENST00000454993 SMARCA4P51532 1647 aa34.74■■■■□ 3.15
GRIK5-203ENST00000454993 TOP2AP11388 1531 aaKnown RBP34.6■■■■□ 3.13
GRIK5-203ENST00000454993 EIF4G1Q04637 1599 aaKnown RBP34.55■■■■□ 3.12
GRIK5-203ENST00000454993 PCGF6Q9BYE7 350 aa34.4■■■■□ 3.1
GRIK5-203ENST00000454993 SMARCA2P51531 1590 aa34.37■■■■□ 3.09
GRIK5-203ENST00000454993 CCDC88BA6NC98 1476 aa34.35■■■■□ 3.09
GRIK5-203ENST00000454993 FAM9AQ8IZU1 332 aaPredicted RBP34.3■■■■□ 3.08
GRIK5-203ENST00000454993 HRCP23327 699 aa34.24■■■■□ 3.07
GRIK5-203ENST00000454993 PEG3Q9GZU2 1588 aa34.21■■■■□ 3.07
GRIK5-203ENST00000454993 ABCC8Q09428 1581 aa34.06■■■■□ 3.04
GRIK5-203ENST00000454993 TRIM26Q12899 539 aaPredicted RBP33.99■■■■□ 3.03
GRIK5-203ENST00000454993 ATAD2BQ9ULI0 1458 aa33.91■■■■□ 3.02
GRIK5-203ENST00000454993 EHMT2Q96KQ7 1210 aa33.88■■■■□ 3.01
GRIK5-203ENST00000454993 BAZ1BQ9UIG0 1483 aaKnown RBP33.76■■■■□ 3
GRIK5-203ENST00000454993 SOGA1O94964 1423 aa33.64■■■□□ 2.98
GRIK5-203ENST00000454993 WRNQ14191 1432 aaPredicted RBP eCLIP33.6■■■□□ 2.97
GRIK5-203ENST00000454993 EEA1Q15075 1411 aa33.57■■■□□ 2.96
GRIK5-203ENST00000454993 RUSC2Q8N2Y8 1516 aa33.49■■■□□ 2.95
GRIK5-203ENST00000454993 SYNJ1O43426 1573 aa33.48■■■□□ 2.95
GRIK5-203ENST00000454993 PPARGC1BQ86YN6 1023 aaKnown RBP33.44■■■□□ 2.94
GRIK5-203ENST00000454993 CSRNP3Q8WYN3 585 aa33.41■■■□□ 2.94
GRIK5-203ENST00000454993 NCAPD3P42695 1498 aa33.4■■■□□ 2.94
GRIK5-203ENST00000454993 HMGXB3Q12766 1538 aa33.39■■■□□ 2.94
GRIK5-203ENST00000454993 TNIKQ9UKE5 1360 aa33.36■■■□□ 2.93
GRIK5-203ENST00000454993 CEP162Q5TB80 1403 aa33.33■■■□□ 2.93
GRIK5-203ENST00000454993 GOLGA3Q08378 1498 aa33.25■■■□□ 2.91
GRIK5-203ENST00000454993 CC2D2AQ9P2K1 1620 aa33.22■■■□□ 2.91
GRIK5-203ENST00000454993 TOP2BQ02880 1626 aa33.18■■■□□ 2.9
GRIK5-203ENST00000454993 KIF21BO75037 1637 aa33.15■■■□□ 2.9
GRIK5-203ENST00000454993 CEP164Q9UPV0 1460 aa33.12■■■□□ 2.89
GRIK5-203ENST00000454993 UBTFP17480 764 aaKnown RBP33.12■■■□□ 2.89
GRIK5-203ENST00000454993 BIVM-ERCC5R4GMW8 1640 aa33.11■■■□□ 2.89
GRIK5-203ENST00000454993 ZEB1P37275 1124 aaPredicted RBP33.09■■■□□ 2.89
GRIK5-203ENST00000454993 CFTRP13569 1480 aa32.98■■■□□ 2.87
GRIK5-203ENST00000454993 CUX1P39880 1505 aa32.89■■■□□ 2.86
GRIK5-203ENST00000454993 RAPGEF2Q9Y4G8 1499 aa32.88■■■□□ 2.85
GRIK5-203ENST00000454993 PRDM2Q13029 1718 aa32.82■■■□□ 2.84
GRIK5-203ENST00000454993 CLIP1P30622 1438 aa32.8■■■□□ 2.84
GRIK5-203ENST00000454993 DNAJC5BQ9UF47 199 aa32.75■■■□□ 2.83
GRIK5-203ENST00000454993 TTBK1Q5TCY1 1321 aaPredicted RBP32.72■■■□□ 2.83
GRIK5-203ENST00000454993 ERICH3Q5RHP9 1530 aa32.71■■■□□ 2.83
GRIK5-203ENST00000454993 PRXQ9BXM0 1461 aa32.71■■■□□ 2.83
GRIK5-203ENST00000454993 CADPSQ9ULU8 1353 aa32.69■■■□□ 2.82
GRIK5-203ENST00000454993 VPS8Q8N3P4 1428 aa32.65■■■□□ 2.82
GRIK5-203ENST00000454993 KIF27Q86VH2 1401 aa32.61■■■□□ 2.81
GRIK5-203ENST00000454993 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.6■■■□□ 2.81
GRIK5-203ENST00000454993 NESP48681 1621 aa32.56■■■□□ 2.8
GRIK5-203ENST00000454993 PELP1Q8IZL8 1130 aaKnown RBP32.52■■■□□ 2.8
GRIK5-203ENST00000454993 CCER1Q8TC90 406 aaPredicted RBP32.51■■■□□ 2.79
GRIK5-203ENST00000454993 RANGAP1P46060 587 aaPredicted RBP32.41■■■□□ 2.78
GRIK5-203ENST00000454993 FANCD2Q9BXW9 1451 aa32.39■■■□□ 2.78
GRIK5-203ENST00000454993 ARAP1Q96P48 1450 aa32.37■■■□□ 2.77
GRIK5-203ENST00000454993 CUX2O14529 1486 aa32.34■■■□□ 2.77
GRIK5-203ENST00000454993 FGD5Q6ZNL6 1462 aa32.34■■■□□ 2.77
GRIK5-203ENST00000454993 APLP2Q06481 763 aa32.31■■■□□ 2.76
GRIK5-203ENST00000454993 IGF1RP08069 1367 aa32.27■■■□□ 2.76
GRIK5-203ENST00000454993 DNMBPQ6XZF7 1577 aa32.16■■■□□ 2.74
GRIK5-203ENST00000454993 ARHGAP35Q9NRY4 1499 aa32.16■■■□□ 2.74
GRIK5-203ENST00000454993 LAMC3Q9Y6N6 1575 aa32.16■■■□□ 2.74
GRIK5-203ENST00000454993 CARMIL1Q5VZK9 1371 aa32.11■■■□□ 2.73
GRIK5-203ENST00000454993 HNRNPUL2Q1KMD3 747 aaKnown RBP32.09■■■□□ 2.73
GRIK5-203ENST00000454993 TOPBP1Q92547 1522 aa32.08■■■□□ 2.73
GRIK5-203ENST00000454993 RAD54L2Q9Y4B4 1467 aa32.06■■■□□ 2.72
GRIK5-203ENST00000454993 POLA1P09884 1462 aaPredicted RBP32.03■■■□□ 2.72
GRIK5-203ENST00000454993 ABCA10Q8WWZ4 1543 aa32.02■■■□□ 2.72
GRIK5-203ENST00000454993 URB2Q14146 1524 aaKnown RBP32.01■■■□□ 2.71
GRIK5-203ENST00000454993 KIF21AQ7Z4S6 1674 aa32■■■□□ 2.71
GRIK5-203ENST00000454993 KANK4Q5T7N3 995 aaPredicted RBP32■■■□□ 2.71
GRIK5-203ENST00000454993 PDS5BQ9NTI5 1447 aa31.98■■■□□ 2.71
GRIK5-203ENST00000454993 SCAF1Q9H7N4 1312 aaKnown RBP31.88■■■□□ 2.69
GRIK5-203ENST00000454993 RRBP1Q9P2E9 1410 aaKnown RBP31.86■■■□□ 2.69
GRIK5-203ENST00000454993 WDR97A6NE52 1622 aa31.84■■■□□ 2.69
GRIK5-203ENST00000454993 CUL7Q14999 1698 aa31.83■■■□□ 2.69
GRIK5-203ENST00000454993 MAP3K1Q13233 1512 aa31.8■■■□□ 2.68
GRIK5-203ENST00000454993 TIAM1Q13009 1591 aa31.77■■■□□ 2.68
GRIK5-203ENST00000454993 TDRD9Q8NDG6 1382 aaKnown RBP31.73■■■□□ 2.67
GRIK5-203ENST00000454993 ABCA5Q8WWZ7 1642 aa31.7■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 230.7 ms