RNA–Protein interactions for RNA: ENST00000454154.1

ARAFP3-201, Transcript of ARAF pseudogene 3, humanhuman

BASIC

Gene ARAFP3, Length 490 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARAFP3-201ENST00000454154 NISCHQ9Y2I1 1504 aa21.33■■□□□ 1
ARAFP3-201ENST00000454154 CCDC180Q9P1Z9 1646 aa18.87■□□□□ 0.61
ARAFP3-201ENST00000454154 ABCC9O60706 1549 aa18.33■□□□□ 0.53
ARAFP3-201ENST00000454154 DCAF8L2P0C7V8 631 aa17.83■□□□□ 0.44
ARAFP3-201ENST00000454154 ZCCHC6Q5VYS8 1495 aaKnown RBP17.75■□□□□ 0.43
ARAFP3-201ENST00000454154 NACADO15069 1562 aa17.72■□□□□ 0.43
ARAFP3-201ENST00000454154 RB1CC1Q8TDY2 1594 aa17.69■□□□□ 0.42
ARAFP3-201ENST00000454154 MYO15BQ96JP2 1530 aa17.64■□□□□ 0.41
ARAFP3-201ENST00000454154 DCAF1Q9Y4B6 1507 aa17.63■□□□□ 0.41
ARAFP3-201ENST00000454154 UNC13AQ9UPW8 1703 aa17.37■□□□□ 0.37
ARAFP3-201ENST00000454154 SCRIBQ14160 1630 aa17.22■□□□□ 0.35
ARAFP3-201ENST00000454154 PABPN1Q86U42 306 aaKnown RBP eCLIP17.2■□□□□ 0.34
ARAFP3-201ENST00000454154 BICRAQ9NZM4 1560 aa17.17■□□□□ 0.34
ARAFP3-201ENST00000454154 SHROOM4Q9ULL8 1493 aa16.95■□□□□ 0.3
ARAFP3-201ENST00000454154 DNAJC5BQ9UF47 199 aa16.76■□□□□ 0.27
ARAFP3-201ENST00000454154 EIF4G1Q04637 1599 aaKnown RBP16.68■□□□□ 0.26
ARAFP3-201ENST00000454154 CECR2Q9BXF3 1484 aa16.61■□□□□ 0.25
ARAFP3-201ENST00000454154 CC2D2AQ9P2K1 1620 aa16.59■□□□□ 0.25
ARAFP3-201ENST00000454154 SMARCA4P51532 1647 aa16.5■□□□□ 0.23
ARAFP3-201ENST00000454154 BAZ1AQ9NRL2 1556 aaPredicted RBP16.49■□□□□ 0.23
ARAFP3-201ENST00000454154 MROH2BQ7Z745 1585 aa16.44■□□□□ 0.22
ARAFP3-201ENST00000454154 ATAD2BQ9ULI0 1458 aa16.38■□□□□ 0.21
ARAFP3-201ENST00000454154 NCAPD3P42695 1498 aa16.35■□□□□ 0.21
ARAFP3-201ENST00000454154 SMARCA2P51531 1590 aa16.35■□□□□ 0.21
ARAFP3-201ENST00000454154 PEG3Q9GZU2 1588 aa16.33■□□□□ 0.2
ARAFP3-201ENST00000454154 RSF1Q96T23 1441 aaPredicted RBP16.31■□□□□ 0.2
ARAFP3-201ENST00000454154 WIZO95785 1651 aa16.3■□□□□ 0.2
ARAFP3-201ENST00000454154 HMGXB3Q12766 1538 aa16.24■□□□□ 0.19
ARAFP3-201ENST00000454154 BAZ1BQ9UIG0 1483 aaKnown RBP16.23■□□□□ 0.19
ARAFP3-201ENST00000454154 TOP2AP11388 1531 aaKnown RBP16.08■□□□□ 0.16
ARAFP3-201ENST00000454154 SUPT5HO00267 1087 aaKnown RBP16.07■□□□□ 0.16
ARAFP3-201ENST00000454154 CCDC88BA6NC98 1476 aa15.94■□□□□ 0.14
ARAFP3-201ENST00000454154 NESP48681 1621 aa15.92■□□□□ 0.14
ARAFP3-201ENST00000454154 CADPSQ9ULU8 1353 aa15.89■□□□□ 0.13
ARAFP3-201ENST00000454154 LAMC3Q9Y6N6 1575 aa15.88■□□□□ 0.13
ARAFP3-201ENST00000454154 CFTRP13569 1480 aa15.81■□□□□ 0.12
ARAFP3-201ENST00000454154 PDS5BQ9NTI5 1447 aa15.78■□□□□ 0.12
ARAFP3-201ENST00000454154 ERCC6Q03468 1493 aa15.76■□□□□ 0.11
ARAFP3-201ENST00000454154 KIF21AQ7Z4S6 1674 aa15.75■□□□□ 0.11
ARAFP3-201ENST00000454154 PRDM2Q13029 1718 aa15.74■□□□□ 0.11
ARAFP3-201ENST00000454154 FANCD2Q9BXW9 1451 aa15.69■□□□□ 0.1
ARAFP3-201ENST00000454154 CEP164Q9UPV0 1460 aa15.64■□□□□ 0.09
ARAFP3-201ENST00000454154 THOC2Q8NI27 1593 aaKnown RBP15.6■□□□□ 0.09
ARAFP3-201ENST00000454154 MRC2Q9UBG0 1479 aa15.59■□□□□ 0.09
ARAFP3-201ENST00000454154 CUX2O14529 1486 aa15.53■□□□□ 0.08
ARAFP3-201ENST00000454154 URB2Q14146 1524 aaKnown RBP15.53■□□□□ 0.08
ARAFP3-201ENST00000454154 WDR62O43379 1518 aa15.52■□□□□ 0.07
ARAFP3-201ENST00000454154 ABCC8Q09428 1581 aa15.49■□□□□ 0.07
ARAFP3-201ENST00000454154 TOPBP1Q92547 1522 aa15.46■□□□□ 0.07
ARAFP3-201ENST00000454154 DNMBPQ6XZF7 1577 aa15.44■□□□□ 0.06
ARAFP3-201ENST00000454154 CUX1P39880 1505 aa15.4■□□□□ 0.06
ARAFP3-201ENST00000454154 WRNQ14191 1432 aaPredicted RBP eCLIP15.36■□□□□ 0.05
ARAFP3-201ENST00000454154 POLA1P09884 1462 aaPredicted RBP15.33■□□□□ 0.04
ARAFP3-201ENST00000454154 SOGA1O94964 1423 aa15.32■□□□□ 0.04
ARAFP3-201ENST00000454154 FGD5Q6ZNL6 1462 aa15.32■□□□□ 0.04
ARAFP3-201ENST00000454154 IFT140Q96RY7 1462 aa15.32■□□□□ 0.04
ARAFP3-201ENST00000454154 TOP2BQ02880 1626 aa15.32■□□□□ 0.04
ARAFP3-201ENST00000454154 BIVM-ERCC5R4GMW8 1640 aa15.32■□□□□ 0.04
ARAFP3-201ENST00000454154 SYNJ1O43426 1573 aa15.31■□□□□ 0.04
ARAFP3-201ENST00000454154 TARBP1Q13395 1621 aaKnown RBP15.29■□□□□ 0.04
ARAFP3-201ENST00000454154 RAD54L2Q9Y4B4 1467 aa15.29■□□□□ 0.04
ARAFP3-201ENST00000454154 AEBP2Q6ZN18 517 aaPredicted RBP15.29■□□□□ 0.04
ARAFP3-201ENST00000454154 ZNF608Q9ULD9 1512 aaPredicted RBP15.24■□□□□ 0.03
ARAFP3-201ENST00000454154 AQRO60306 1485 aaKnown RBP eCLIP15.2■□□□□ 0.02
ARAFP3-201ENST00000454154 TDRD9Q8NDG6 1382 aaKnown RBP15.2■□□□□ 0.02
ARAFP3-201ENST00000454154 WDR97A6NE52 1622 aa15.18■□□□□ 0.02
ARAFP3-201ENST00000454154 ABCA10Q8WWZ4 1543 aa15.17■□□□□ 0.02
ARAFP3-201ENST00000454154 EIF4G3O43432 1585 aaKnown RBP15.16■□□□□ 0.02
ARAFP3-201ENST00000454154 TRIM41Q8WV44 630 aa15.16■□□□□ 0.02
ARAFP3-201ENST00000454154 GAPVD1Q14C86 1478 aa15.12■□□□□ 0.01
ARAFP3-201ENST00000454154 CHIC1Q5VXU3 224 aa15.1■□□□□ 0.01
ARAFP3-201ENST00000454154 ABCA5Q8WWZ7 1642 aa15.1■□□□□ 0.01
ARAFP3-201ENST00000454154 PBRM1Q86U86 1689 aa15.08■□□□□ 0
ARAFP3-201ENST00000454154 GRIN2BQ13224 1484 aa15.08■□□□□ 0
ARAFP3-201ENST00000454154 KIF27Q86VH2 1401 aa15.03■□□□□ -0
ARAFP3-201ENST00000454154 SNAPC4Q5SXM2 1469 aa15.02■□□□□ -0
ARAFP3-201ENST00000454154 MAGI1Q96QZ7 1491 aaPredicted RBP15.01□□□□□ -0.01
ARAFP3-201ENST00000454154 FBLN2P98095 1184 aa15.01□□□□□ -0.01
ARAFP3-201ENST00000454154 OSCARQ8IYS5 282 aa15□□□□□ -0.01
ARAFP3-201ENST00000454154 ERICH3Q5RHP9 1530 aa15□□□□□ -0.01
ARAFP3-201ENST00000454154 CHD1O14646 1710 aa15□□□□□ -0.01
ARAFP3-201ENST00000454154 IGF1RP08069 1367 aa14.99□□□□□ -0.01
ARAFP3-201ENST00000454154 RUSC2Q8N2Y8 1516 aa14.99□□□□□ -0.01
ARAFP3-201ENST00000454154 CHMP7Q8WUX9 453 aaPredicted RBP14.99□□□□□ -0.01
ARAFP3-201ENST00000454154 DNAJC5Q9H3Z4 198 aa14.96□□□□□ -0.01
ARAFP3-201ENST00000454154 SYNJ2O15056 1496 aa14.95□□□□□ -0.02
ARAFP3-201ENST00000454154 FHAD1B1AJZ9 1412 aa14.94□□□□□ -0.02
ARAFP3-201ENST00000454154 ADAMTS12P58397 1594 aa14.92□□□□□ -0.02
ARAFP3-201ENST00000454154 CARMIL1Q5VZK9 1371 aa14.89□□□□□ -0.03
ARAFP3-201ENST00000454154 CUL7Q14999 1698 aa14.89□□□□□ -0.03
ARAFP3-201ENST00000454154 GRIN2AQ12879 1464 aa14.88□□□□□ -0.03
ARAFP3-201ENST00000454154 CSRNP3Q8WYN3 585 aa14.87□□□□□ -0.03
ARAFP3-201ENST00000454154 FAM9AQ8IZU1 332 aaPredicted RBP14.85□□□□□ -0.03
ARAFP3-201ENST00000454154 EEA1Q15075 1411 aa14.83□□□□□ -0.03
ARAFP3-201ENST00000454154 NUP160Q12769 1436 aa14.81□□□□□ -0.04
ARAFP3-201ENST00000454154 CEP170Q5SW79 1584 aa14.81□□□□□ -0.04
ARAFP3-201ENST00000454154 RAPGEF2Q9Y4G8 1499 aa14.8□□□□□ -0.04
ARAFP3-201ENST00000454154 CLASP1Q7Z460 1538 aa14.79□□□□□ -0.04
ARAFP3-201ENST00000454154 PRXQ9BXM0 1461 aa14.78□□□□□ -0.04
ARAFP3-201ENST00000454154 JPH4Q96JJ6 628 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms