RNA–Protein interactions for RNA: ENST00000454017.5

KRIT1-216, Transcript of KRIT1, ankyrin repeat containing, humanhuman

TSL 3

Gene KRIT1, Length 978 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRIT1-216ENST00000454017 AEBP2Q6ZN18 517 aaPredicted RBP25.24■■□□□ 1.63
KRIT1-216ENST00000454017 CHIC1Q5VXU3 224 aa24.53■■□□□ 1.52
KRIT1-216ENST00000454017 NISCHQ9Y2I1 1504 aa23.52■■□□□ 1.36
KRIT1-216ENST00000454017 PHF23Q9BUL5 403 aaPredicted RBP21.57■■□□□ 1.04
KRIT1-216ENST00000454017 SENP3Q9H4L4 574 aaPredicted RBP21.41■■□□□ 1.02
KRIT1-216ENST00000454017 ABCC9O60706 1549 aa21.16■□□□□ 0.98
KRIT1-216ENST00000454017 CCDC180Q9P1Z9 1646 aa21.11■□□□□ 0.97
KRIT1-216ENST00000454017 DNAJC5BQ9UF47 199 aa20.29■□□□□ 0.84
KRIT1-216ENST00000454017 RB1CC1Q8TDY2 1594 aa20.03■□□□□ 0.8
KRIT1-216ENST00000454017 NACADO15069 1562 aa19.91■□□□□ 0.78
KRIT1-216ENST00000454017 FOXD1Q16676 465 aa19.9■□□□□ 0.78
KRIT1-216ENST00000454017 PLPPR3Q6T4P5 718 aa19.89■□□□□ 0.77
KRIT1-216ENST00000454017 DCAF8L2P0C7V8 631 aa19.87■□□□□ 0.77
KRIT1-216ENST00000454017 PABPN1Q86U42 306 aaKnown RBP eCLIP19.78■□□□□ 0.76
KRIT1-216ENST00000454017 MYO15BQ96JP2 1530 aa19.66■□□□□ 0.74
KRIT1-216ENST00000454017 UNC13AQ9UPW8 1703 aa19.65■□□□□ 0.74
KRIT1-216ENST00000454017 ZCCHC6Q5VYS8 1495 aaKnown RBP19.52■□□□□ 0.72
KRIT1-216ENST00000454017 BICRAQ9NZM4 1560 aa19.47■□□□□ 0.71
KRIT1-216ENST00000454017 DCAF1Q9Y4B6 1507 aa19.45■□□□□ 0.7
KRIT1-216ENST00000454017 SCRIBQ14160 1630 aa19.22■□□□□ 0.67
KRIT1-216ENST00000454017 SHROOM4Q9ULL8 1493 aa19.19■□□□□ 0.66
KRIT1-216ENST00000454017 PPP6R1Q9UPN7 881 aa19.09■□□□□ 0.65
KRIT1-216ENST00000454017 ADRA2BP18089 450 aa19.08■□□□□ 0.64
KRIT1-216ENST00000454017 CECR2Q9BXF3 1484 aa19.08■□□□□ 0.64
KRIT1-216ENST00000454017 CC2D2AQ9P2K1 1620 aa19■□□□□ 0.63
KRIT1-216ENST00000454017 EIF4G1Q04637 1599 aaKnown RBP18.97■□□□□ 0.63
KRIT1-216ENST00000454017 DNAJC5Q9H3Z4 198 aa18.93■□□□□ 0.62
KRIT1-216ENST00000454017 PIAS4Q8N2W9 510 aaPredicted RBP18.77■□□□□ 0.6
KRIT1-216ENST00000454017 MSH5O43196 834 aa18.37■□□□□ 0.53
KRIT1-216ENST00000454017 NCAPD3P42695 1498 aa18.37■□□□□ 0.53
KRIT1-216ENST00000454017 SMARCA4P51532 1647 aa18.35■□□□□ 0.53
KRIT1-216ENST00000454017 ATAD2BQ9ULI0 1458 aa18.33■□□□□ 0.52
KRIT1-216ENST00000454017 ERCC6Q03468 1493 aa18.32■□□□□ 0.52
KRIT1-216ENST00000454017 CUX2O14529 1486 aa18.31■□□□□ 0.52
KRIT1-216ENST00000454017 SMARCA2P51531 1590 aa18.28■□□□□ 0.52
KRIT1-216ENST00000454017 HMGXB3Q12766 1538 aa18.26■□□□□ 0.51
KRIT1-216ENST00000454017 BAZ1AQ9NRL2 1556 aaPredicted RBP18.25■□□□□ 0.51
KRIT1-216ENST00000454017 PEG3Q9GZU2 1588 aa18.17■□□□□ 0.5
KRIT1-216ENST00000454017 BAZ1BQ9UIG0 1483 aaKnown RBP18.14■□□□□ 0.5
KRIT1-216ENST00000454017 MROH2BQ7Z745 1585 aa18.13■□□□□ 0.49
KRIT1-216ENST00000454017 NESP48681 1621 aa18.06■□□□□ 0.48
KRIT1-216ENST00000454017 TRIM41Q8WV44 630 aa18.05■□□□□ 0.48
KRIT1-216ENST00000454017 LAMC3Q9Y6N6 1575 aa17.96■□□□□ 0.46
KRIT1-216ENST00000454017 WIZO95785 1651 aa17.93■□□□□ 0.46
KRIT1-216ENST00000454017 THOC2Q8NI27 1593 aaKnown RBP17.89■□□□□ 0.45
KRIT1-216ENST00000454017 KIF21AQ7Z4S6 1674 aa17.87■□□□□ 0.45
KRIT1-216ENST00000454017 PDS5BQ9NTI5 1447 aa17.81■□□□□ 0.44
KRIT1-216ENST00000454017 CADPSQ9ULU8 1353 aa17.8■□□□□ 0.44
KRIT1-216ENST00000454017 RSF1Q96T23 1441 aaPredicted RBP17.77■□□□□ 0.44
KRIT1-216ENST00000454017 TOP2AP11388 1531 aaKnown RBP17.7■□□□□ 0.42
KRIT1-216ENST00000454017 MRC2Q9UBG0 1479 aa17.68■□□□□ 0.42
KRIT1-216ENST00000454017 WDR62O43379 1518 aa17.65■□□□□ 0.42
KRIT1-216ENST00000454017 OSCARQ8IYS5 282 aa17.64■□□□□ 0.41
KRIT1-216ENST00000454017 CFTRP13569 1480 aa17.63■□□□□ 0.41
KRIT1-216ENST00000454017 CEP164Q9UPV0 1460 aa17.62■□□□□ 0.41
KRIT1-216ENST00000454017 FANCD2Q9BXW9 1451 aa17.61■□□□□ 0.41
KRIT1-216ENST00000454017 PRDM2Q13029 1718 aa17.53■□□□□ 0.4
KRIT1-216ENST00000454017 PPP4R3CPQ6ZMV5 832 aa17.53■□□□□ 0.4
KRIT1-216ENST00000454017 CCDC88BA6NC98 1476 aa17.49■□□□□ 0.39
KRIT1-216ENST00000454017 URB2Q14146 1524 aaKnown RBP17.47■□□□□ 0.39
KRIT1-216ENST00000454017 SCAF1Q9H7N4 1312 aaKnown RBP17.42■□□□□ 0.38
KRIT1-216ENST00000454017 MAPK8IP2Q13387 824 aaPredicted RBP17.34■□□□□ 0.37
KRIT1-216ENST00000454017 CYB5RLQ6IPT4 315 aa17.29■□□□□ 0.36
KRIT1-216ENST00000454017 TOPBP1Q92547 1522 aa17.29■□□□□ 0.36
KRIT1-216ENST00000454017 TRHP20396 242 aaPredicted RBP17.27■□□□□ 0.36
KRIT1-216ENST00000454017 IFT140Q96RY7 1462 aa17.25■□□□□ 0.35
KRIT1-216ENST00000454017 ABCC8Q09428 1581 aa17.24■□□□□ 0.35
KRIT1-216ENST00000454017 DNMBPQ6XZF7 1577 aa17.24■□□□□ 0.35
KRIT1-216ENST00000454017 ZNF608Q9ULD9 1512 aaPredicted RBP17.24■□□□□ 0.35
KRIT1-216ENST00000454017 RIMBP3CA6NJZ7 1639 aa17.21■□□□□ 0.35
KRIT1-216ENST00000454017 RIMBP3BA6NNM3 1639 aa17.21■□□□□ 0.35
KRIT1-216ENST00000454017 RIMBP3Q9UFD9 1639 aa17.21■□□□□ 0.35
KRIT1-216ENST00000454017 EIF4G3O43432 1585 aaKnown RBP17.17■□□□□ 0.34
KRIT1-216ENST00000454017 FBLN2P98095 1184 aa17.16■□□□□ 0.34
KRIT1-216ENST00000454017 TARBP1Q13395 1621 aaKnown RBP17.16■□□□□ 0.34
KRIT1-216ENST00000454017 ARHGEF11O15085 1522 aa17.14■□□□□ 0.33
KRIT1-216ENST00000454017 POLA1P09884 1462 aaPredicted RBP17.12■□□□□ 0.33
KRIT1-216ENST00000454017 AQRO60306 1485 aaKnown RBP eCLIP17.08■□□□□ 0.32
KRIT1-216ENST00000454017 DMRT2Q9Y5R5 561 aa17.07■□□□□ 0.32
KRIT1-216ENST00000454017 RAD54L2Q9Y4B4 1467 aa17.05■□□□□ 0.32
KRIT1-216ENST00000454017 CHD1O14646 1710 aa17.04■□□□□ 0.32
KRIT1-216ENST00000454017 CUX1P39880 1505 aa17.03■□□□□ 0.32
KRIT1-216ENST00000454017 KCNA4P22459 653 aa17.03■□□□□ 0.32
KRIT1-216ENST00000454017 NCBP3Q53F19 620 aaKnown RBP17.03■□□□□ 0.32
KRIT1-216ENST00000454017 CNKSR2Q8WXI2 1034 aa17.03■□□□□ 0.32
KRIT1-216ENST00000454017 FGD5Q6ZNL6 1462 aa17.02■□□□□ 0.32
KRIT1-216ENST00000454017 SOGA1O94964 1423 aa17.02■□□□□ 0.31
KRIT1-216ENST00000454017 SUPT5HO00267 1087 aaKnown RBP16.99■□□□□ 0.31
KRIT1-216ENST00000454017 WDR97A6NE52 1622 aa16.98■□□□□ 0.31
KRIT1-216ENST00000454017 TDRD9Q8NDG6 1382 aaKnown RBP16.98■□□□□ 0.31
KRIT1-216ENST00000454017 POTEDQ86YR6 584 aa16.95■□□□□ 0.3
KRIT1-216ENST00000454017 ARAP1Q96P48 1450 aa16.93■□□□□ 0.3
KRIT1-216ENST00000454017 CHMP7Q8WUX9 453 aaPredicted RBP16.91■□□□□ 0.3
KRIT1-216ENST00000454017 SNAPC4Q5SXM2 1469 aa16.91■□□□□ 0.3
KRIT1-216ENST00000454017 MAGI1Q96QZ7 1491 aaPredicted RBP16.88■□□□□ 0.29
KRIT1-216ENST00000454017 GRIN2BQ13224 1484 aa16.87■□□□□ 0.29
KRIT1-216ENST00000454017 PBRM1Q86U86 1689 aa16.87■□□□□ 0.29
KRIT1-216ENST00000454017 ABCA10Q8WWZ4 1543 aa16.84■□□□□ 0.29
KRIT1-216ENST00000454017 GAPVD1Q14C86 1478 aa16.83■□□□□ 0.28
KRIT1-216ENST00000454017 CLASP1Q7Z460 1538 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms