RNA–Protein interactions for RNA: ENST00000453908.7

SH3D21-201, Transcript of SH3 domain containing 21, humanhuman

APPRIS P1 TSL 5

Gene SH3D21, Length 2,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-201ENST00000453908 NISCHQ9Y2I1 1504 aa46.88■■■■■ 5.1
SH3D21-201ENST00000453908 CCDC180Q9P1Z9 1646 aa40.32■■■■■ 4.05
SH3D21-201ENST00000453908 ZCCHC6Q5VYS8 1495 aaKnown RBP39.49■■■■□ 3.91
SH3D21-201ENST00000453908 SHROOM4Q9ULL8 1493 aa39.26■■■■□ 3.88
SH3D21-201ENST00000453908 DCAF8L2P0C7V8 631 aa39.08■■■■□ 3.85
SH3D21-201ENST00000453908 DCAF1Q9Y4B6 1507 aa38.49■■■■□ 3.75
SH3D21-201ENST00000453908 SUPT5HO00267 1087 aaKnown RBP38.07■■■■□ 3.69
SH3D21-201ENST00000453908 ABCC9O60706 1549 aa38.07■■■■□ 3.68
SH3D21-201ENST00000453908 MYO15BQ96JP2 1530 aa37.72■■■■□ 3.63
SH3D21-201ENST00000453908 SCRIBQ14160 1630 aa37.61■■■■□ 3.61
SH3D21-201ENST00000453908 NACADO15069 1562 aa37.48■■■■□ 3.59
SH3D21-201ENST00000453908 RB1CC1Q8TDY2 1594 aa37.06■■■■□ 3.52
SH3D21-201ENST00000453908 RSF1Q96T23 1441 aaPredicted RBP36.73■■■■□ 3.47
SH3D21-201ENST00000453908 CECR2Q9BXF3 1484 aa36.6■■■■□ 3.45
SH3D21-201ENST00000453908 CHIC1Q5VXU3 224 aa36.58■■■■□ 3.45
SH3D21-201ENST00000453908 UNC13AQ9UPW8 1703 aa36.47■■■■□ 3.43
SH3D21-201ENST00000453908 MROH2BQ7Z745 1585 aa36.39■■■■□ 3.42
SH3D21-201ENST00000453908 PABPN1Q86U42 306 aaKnown RBP eCLIP36.19■■■■□ 3.38
SH3D21-201ENST00000453908 WIZO95785 1651 aa36.15■■■■□ 3.38
SH3D21-201ENST00000453908 BAZ1AQ9NRL2 1556 aaPredicted RBP36.09■■■■□ 3.37
SH3D21-201ENST00000453908 BICRAQ9NZM4 1560 aa36.05■■■■□ 3.36
SH3D21-201ENST00000453908 SMARCA4P51532 1647 aa35.9■■■■□ 3.34
SH3D21-201ENST00000453908 TOP2AP11388 1531 aaKnown RBP35.59■■■■□ 3.29
SH3D21-201ENST00000453908 TRIM41Q8WV44 630 aa35.55■■■■□ 3.28
SH3D21-201ENST00000453908 LOC105371045A0A1W2PR82 267 aa35.44■■■■□ 3.26
SH3D21-201ENST00000453908 CCDC88BA6NC98 1476 aa35.4■■■■□ 3.26
SH3D21-201ENST00000453908 SMARCA2P51531 1590 aa35.36■■■■□ 3.25
SH3D21-201ENST00000453908 EIF4G1Q04637 1599 aaKnown RBP35.27■■■■□ 3.24
SH3D21-201ENST00000453908 PEG3Q9GZU2 1588 aa35.26■■■■□ 3.24
SH3D21-201ENST00000453908 FAM9AQ8IZU1 332 aaPredicted RBP35.21■■■■□ 3.23
SH3D21-201ENST00000453908 ATAD2BQ9ULI0 1458 aa35.19■■■■□ 3.22
SH3D21-201ENST00000453908 BAZ1BQ9UIG0 1483 aaKnown RBP35.05■■■■□ 3.2
SH3D21-201ENST00000453908 ABCC8Q09428 1581 aa35.02■■■■□ 3.2
SH3D21-201ENST00000453908 EHMT2Q96KQ7 1210 aa34.92■■■■□ 3.18
SH3D21-201ENST00000453908 NCAPD3P42695 1498 aa34.66■■■■□ 3.14
SH3D21-201ENST00000453908 HMGXB3Q12766 1538 aa34.61■■■■□ 3.13
SH3D21-201ENST00000453908 WRNQ14191 1432 aaPredicted RBP eCLIP34.55■■■■□ 3.12
SH3D21-201ENST00000453908 PCGF6Q9BYE7 350 aa34.51■■■■□ 3.11
SH3D21-201ENST00000453908 SOGA1O94964 1423 aa34.5■■■■□ 3.11
SH3D21-201ENST00000453908 SYNJ1O43426 1573 aa34.41■■■■□ 3.1
SH3D21-201ENST00000453908 RUSC2Q8N2Y8 1516 aa34.37■■■■□ 3.09
SH3D21-201ENST00000453908 CC2D2AQ9P2K1 1620 aa34.29■■■■□ 3.08
SH3D21-201ENST00000453908 CSRNP3Q8WYN3 585 aa34.21■■■■□ 3.07
SH3D21-201ENST00000453908 EEA1Q15075 1411 aa34.18■■■■□ 3.06
SH3D21-201ENST00000453908 CFTRP13569 1480 aa34.14■■■■□ 3.06
SH3D21-201ENST00000453908 TOP2BQ02880 1626 aa34.08■■■■□ 3.05
SH3D21-201ENST00000453908 TRIM26Q12899 539 aaPredicted RBP34.07■■■■□ 3.04
SH3D21-201ENST00000453908 UBTFP17480 764 aaKnown RBP34■■■■□ 3.03
SH3D21-201ENST00000453908 BIVM-ERCC5R4GMW8 1640 aa33.97■■■■□ 3.03
SH3D21-201ENST00000453908 CUX1P39880 1505 aa33.94■■■■□ 3.02
SH3D21-201ENST00000453908 CADPSQ9ULU8 1353 aa33.93■■■■□ 3.02
SH3D21-201ENST00000453908 CEP162Q5TB80 1403 aa33.92■■■■□ 3.02
SH3D21-201ENST00000453908 TNIKQ9UKE5 1360 aa33.92■■■■□ 3.02
SH3D21-201ENST00000453908 GOLGA3Q08378 1498 aa33.91■■■■□ 3.02
SH3D21-201ENST00000453908 PPARGC1BQ86YN6 1023 aaKnown RBP33.91■■■■□ 3.02
SH3D21-201ENST00000453908 HRCP23327 699 aa33.86■■■■□ 3.01
SH3D21-201ENST00000453908 PRDM2Q13029 1718 aa33.83■■■■□ 3.01
SH3D21-201ENST00000453908 CEP164Q9UPV0 1460 aa33.82■■■■□ 3
SH3D21-201ENST00000453908 KIF21BO75037 1637 aa33.77■■■■□ 3
SH3D21-201ENST00000453908 RAPGEF2Q9Y4G8 1499 aa33.71■■■□□ 2.99
SH3D21-201ENST00000453908 NESP48681 1621 aa33.64■■■□□ 2.98
SH3D21-201ENST00000453908 DNAJC5BQ9UF47 199 aa33.63■■■□□ 2.97
SH3D21-201ENST00000453908 FANCD2Q9BXW9 1451 aa33.61■■■□□ 2.97
SH3D21-201ENST00000453908 KIF27Q86VH2 1401 aa33.57■■■□□ 2.96
SH3D21-201ENST00000453908 RANGAP1P46060 587 aaPredicted RBP33.56■■■□□ 2.96
SH3D21-201ENST00000453908 TTBK1Q5TCY1 1321 aaPredicted RBP33.56■■■□□ 2.96
SH3D21-201ENST00000453908 FGD5Q6ZNL6 1462 aa33.49■■■□□ 2.95
SH3D21-201ENST00000453908 PRXQ9BXM0 1461 aa33.49■■■□□ 2.95
SH3D21-201ENST00000453908 CLIP1P30622 1438 aa33.49■■■□□ 2.95
SH3D21-201ENST00000453908 CUX2O14529 1486 aa33.44■■■□□ 2.94
SH3D21-201ENST00000453908 ERICH3Q5RHP9 1530 aa33.39■■■□□ 2.94
SH3D21-201ENST00000453908 LAMC3Q9Y6N6 1575 aa33.34■■■□□ 2.93
SH3D21-201ENST00000453908 DNMBPQ6XZF7 1577 aa33.3■■■□□ 2.92
SH3D21-201ENST00000453908 TOPBP1Q92547 1522 aa33.29■■■□□ 2.92
SH3D21-201ENST00000453908 IGF1RP08069 1367 aa33.26■■■□□ 2.92
SH3D21-201ENST00000453908 RAD54L2Q9Y4B4 1467 aa33.25■■■□□ 2.91
SH3D21-201ENST00000453908 VPS8Q8N3P4 1428 aa33.22■■■□□ 2.91
SH3D21-201ENST00000453908 POLA1P09884 1462 aaPredicted RBP33.21■■■□□ 2.91
SH3D21-201ENST00000453908 URB2Q14146 1524 aaKnown RBP33.17■■■□□ 2.9
SH3D21-201ENST00000453908 PDS5BQ9NTI5 1447 aa33.15■■■□□ 2.9
SH3D21-201ENST00000453908 CARMIL1Q5VZK9 1371 aa33.12■■■□□ 2.89
SH3D21-201ENST00000453908 ABCA10Q8WWZ4 1543 aa33.07■■■□□ 2.89
SH3D21-201ENST00000453908 KIF21AQ7Z4S6 1674 aa33.07■■■□□ 2.89
SH3D21-201ENST00000453908 ARAP1Q96P48 1450 aa33.05■■■□□ 2.88
SH3D21-201ENST00000453908 APLP2Q06481 763 aa33.03■■■□□ 2.88
SH3D21-201ENST00000453908 ARHGAP35Q9NRY4 1499 aa32.93■■■□□ 2.86
SH3D21-201ENST00000453908 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.92■■■□□ 2.86
SH3D21-201ENST00000453908 TDRD9Q8NDG6 1382 aaKnown RBP32.9■■■□□ 2.86
SH3D21-201ENST00000453908 ZEB1P37275 1124 aaPredicted RBP32.88■■■□□ 2.85
SH3D21-201ENST00000453908 WDR97A6NE52 1622 aa32.86■■■□□ 2.85
SH3D21-201ENST00000453908 CCER1Q8TC90 406 aaPredicted RBP32.77■■■□□ 2.84
SH3D21-201ENST00000453908 CUL7Q14999 1698 aa32.75■■■□□ 2.83
SH3D21-201ENST00000453908 GAPVD1Q14C86 1478 aa32.75■■■□□ 2.83
SH3D21-201ENST00000453908 ABCA5Q8WWZ7 1642 aa32.74■■■□□ 2.83
SH3D21-201ENST00000453908 KANK4Q5T7N3 995 aaPredicted RBP32.73■■■□□ 2.83
SH3D21-201ENST00000453908 P3H3Q8IVL6 736 aa32.7■■■□□ 2.83
SH3D21-201ENST00000453908 MRC2Q9UBG0 1479 aa32.7■■■□□ 2.82
SH3D21-201ENST00000453908 HNRNPUL2Q1KMD3 747 aaKnown RBP32.69■■■□□ 2.82
SH3D21-201ENST00000453908 TARBP1Q13395 1621 aaKnown RBP32.68■■■□□ 2.82
SH3D21-201ENST00000453908 AQRO60306 1485 aaKnown RBP eCLIP32.55■■■□□ 2.84e-11■■■■■ 34.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms