RNA–Protein interactions for RNA: ENST00000453435.1

HTR3D-204, Transcript of 5-hydroxytryptamine receptor 3D, humanhuman

TSL 1 (best) BASIC

Gene HTR3D, Length 1,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3D-204ENST00000453435 NISCHQ9Y2I1 1504 aa29.74■■■□□ 2.35
HTR3D-204ENST00000453435 CCDC180Q9P1Z9 1646 aa26.33■■□□□ 1.81
HTR3D-204ENST00000453435 ABCC9O60706 1549 aa25.58■■□□□ 1.68
HTR3D-204ENST00000453435 DCAF8L2P0C7V8 631 aa24.86■■□□□ 1.57
HTR3D-204ENST00000453435 ZCCHC6Q5VYS8 1495 aaKnown RBP24.79■■□□□ 1.56
HTR3D-204ENST00000453435 NACADO15069 1562 aa24.74■■□□□ 1.55
HTR3D-204ENST00000453435 RB1CC1Q8TDY2 1594 aa24.71■■□□□ 1.55
HTR3D-204ENST00000453435 MYO15BQ96JP2 1530 aa24.66■■□□□ 1.54
HTR3D-204ENST00000453435 DCAF1Q9Y4B6 1507 aa24.62■■□□□ 1.53
HTR3D-204ENST00000453435 UNC13AQ9UPW8 1703 aa24.06■■□□□ 1.44
HTR3D-204ENST00000453435 SCRIBQ14160 1630 aa24.03■■□□□ 1.44
HTR3D-204ENST00000453435 PABPN1Q86U42 306 aaKnown RBP eCLIP23.96■■□□□ 1.43
HTR3D-204ENST00000453435 DNAJC5BQ9UF47 199 aa23.96■■□□□ 1.43
HTR3D-204ENST00000453435 BICRAQ9NZM4 1560 aa23.9■■□□□ 1.42
HTR3D-204ENST00000453435 SHROOM4Q9ULL8 1493 aa23.73■■□□□ 1.39
HTR3D-204ENST00000453435 EIF4G1Q04637 1599 aaKnown RBP23.27■■□□□ 1.32
HTR3D-204ENST00000453435 CC2D2AQ9P2K1 1620 aa23.12■■□□□ 1.29
HTR3D-204ENST00000453435 CECR2Q9BXF3 1484 aa23.11■■□□□ 1.29
HTR3D-204ENST00000453435 BAZ1AQ9NRL2 1556 aaPredicted RBP23.05■■□□□ 1.28
HTR3D-204ENST00000453435 SMARCA4P51532 1647 aa23.01■■□□□ 1.27
HTR3D-204ENST00000453435 MROH2BQ7Z745 1585 aa22.9■■□□□ 1.26
HTR3D-204ENST00000453435 ATAD2BQ9ULI0 1458 aa22.85■■□□□ 1.25
HTR3D-204ENST00000453435 SMARCA2P51531 1590 aa22.85■■□□□ 1.25
HTR3D-204ENST00000453435 NCAPD3P42695 1498 aa22.83■■□□□ 1.25
HTR3D-204ENST00000453435 PEG3Q9GZU2 1588 aa22.79■■□□□ 1.24
HTR3D-204ENST00000453435 RSF1Q96T23 1441 aaPredicted RBP22.74■■□□□ 1.23
HTR3D-204ENST00000453435 HMGXB3Q12766 1538 aa22.71■■□□□ 1.23
HTR3D-204ENST00000453435 BAZ1BQ9UIG0 1483 aaKnown RBP22.7■■□□□ 1.22
HTR3D-204ENST00000453435 WIZO95785 1651 aa22.66■■□□□ 1.22
HTR3D-204ENST00000453435 DNAJC5Q9H3Z4 198 aa22.52■■□□□ 1.2
HTR3D-204ENST00000453435 TOP2AP11388 1531 aaKnown RBP22.45■■□□□ 1.18
HTR3D-204ENST00000453435 SUPT5HO00267 1087 aaKnown RBP22.39■■□□□ 1.17
HTR3D-204ENST00000453435 CCDC88BA6NC98 1476 aa22.21■■□□□ 1.15
HTR3D-204ENST00000453435 CADPSQ9ULU8 1353 aa22.19■■□□□ 1.14
HTR3D-204ENST00000453435 LAMC3Q9Y6N6 1575 aa22.18■■□□□ 1.14
HTR3D-204ENST00000453435 NESP48681 1621 aa22.17■■□□□ 1.14
HTR3D-204ENST00000453435 CFTRP13569 1480 aa22.08■■□□□ 1.12
HTR3D-204ENST00000453435 PDS5BQ9NTI5 1447 aa22.07■■□□□ 1.12
HTR3D-204ENST00000453435 ERCC6Q03468 1493 aa22.07■■□□□ 1.12
HTR3D-204ENST00000453435 FANCD2Q9BXW9 1451 aa21.91■■□□□ 1.1
HTR3D-204ENST00000453435 KIF21AQ7Z4S6 1674 aa21.9■■□□□ 1.1
HTR3D-204ENST00000453435 PRDM2Q13029 1718 aa21.88■■□□□ 1.09
HTR3D-204ENST00000453435 CEP164Q9UPV0 1460 aa21.87■■□□□ 1.09
HTR3D-204ENST00000453435 MRC2Q9UBG0 1479 aa21.79■■□□□ 1.08
HTR3D-204ENST00000453435 THOC2Q8NI27 1593 aaKnown RBP21.77■■□□□ 1.08
HTR3D-204ENST00000453435 CUX2O14529 1486 aa21.74■■□□□ 1.07
HTR3D-204ENST00000453435 WDR62O43379 1518 aa21.69■■□□□ 1.06
HTR3D-204ENST00000453435 ABCC8Q09428 1581 aa21.65■■□□□ 1.06
HTR3D-204ENST00000453435 URB2Q14146 1524 aaKnown RBP21.65■■□□□ 1.06
HTR3D-204ENST00000453435 TOPBP1Q92547 1522 aa21.57■■□□□ 1.04
HTR3D-204ENST00000453435 DNMBPQ6XZF7 1577 aa21.57■■□□□ 1.04
HTR3D-204ENST00000453435 CUX1P39880 1505 aa21.47■■□□□ 1.03
HTR3D-204ENST00000453435 WRNQ14191 1432 aaPredicted RBP eCLIP21.46■■□□□ 1.03
HTR3D-204ENST00000453435 IFT140Q96RY7 1462 aa21.41■■□□□ 1.02
HTR3D-204ENST00000453435 POLA1P09884 1462 aaPredicted RBP21.39■■□□□ 1.02
HTR3D-204ENST00000453435 FGD5Q6ZNL6 1462 aa21.39■■□□□ 1.01
HTR3D-204ENST00000453435 SOGA1O94964 1423 aa21.37■■□□□ 1.01
HTR3D-204ENST00000453435 TOP2BQ02880 1626 aa21.36■■□□□ 1.01
HTR3D-204ENST00000453435 BIVM-ERCC5R4GMW8 1640 aa21.34■■□□□ 1.01
HTR3D-204ENST00000453435 SYNJ1O43426 1573 aa21.34■■□□□ 1.01
HTR3D-204ENST00000453435 RAD54L2Q9Y4B4 1467 aa21.31■■□□□ 1
HTR3D-204ENST00000453435 TARBP1Q13395 1621 aaKnown RBP21.29■■□□□ 1
HTR3D-204ENST00000453435 ZNF608Q9ULD9 1512 aaPredicted RBP21.25■□□□□ 0.99
HTR3D-204ENST00000453435 TRIM41Q8WV44 630 aa21.24■□□□□ 0.99
HTR3D-204ENST00000453435 TDRD9Q8NDG6 1382 aaKnown RBP21.21■□□□□ 0.99
HTR3D-204ENST00000453435 ABCA10Q8WWZ4 1543 aa21.19■□□□□ 0.98
HTR3D-204ENST00000453435 AQRO60306 1485 aaKnown RBP eCLIP21.19■□□□□ 0.98
HTR3D-204ENST00000453435 WDR97A6NE52 1622 aa21.18■□□□□ 0.98
HTR3D-204ENST00000453435 EIF4G3O43432 1585 aaKnown RBP21.17■□□□□ 0.98
HTR3D-204ENST00000453435 GAPVD1Q14C86 1478 aa21.11■□□□□ 0.97
HTR3D-204ENST00000453435 GRIN2BQ13224 1484 aa21.07■□□□□ 0.96
HTR3D-204ENST00000453435 ABCA5Q8WWZ7 1642 aa21.05■□□□□ 0.96
HTR3D-204ENST00000453435 KIF27Q86VH2 1401 aa21.02■□□□□ 0.96
HTR3D-204ENST00000453435 CHIC1Q5VXU3 224 aa21■□□□□ 0.95
HTR3D-204ENST00000453435 PBRM1Q86U86 1689 aa20.99■□□□□ 0.95
HTR3D-204ENST00000453435 SNAPC4Q5SXM2 1469 aa20.99■□□□□ 0.95
HTR3D-204ENST00000453435 MAGI1Q96QZ7 1491 aaPredicted RBP20.99■□□□□ 0.95
HTR3D-204ENST00000453435 ERICH3Q5RHP9 1530 aa20.96■□□□□ 0.95
HTR3D-204ENST00000453435 FBLN2P98095 1184 aa20.96■□□□□ 0.95
HTR3D-204ENST00000453435 OSCARQ8IYS5 282 aa20.94■□□□□ 0.94
HTR3D-204ENST00000453435 CHMP7Q8WUX9 453 aaPredicted RBP20.94■□□□□ 0.94
HTR3D-204ENST00000453435 SYNJ2O15056 1496 aa20.91■□□□□ 0.94
HTR3D-204ENST00000453435 IGF1RP08069 1367 aa20.89■□□□□ 0.93
HTR3D-204ENST00000453435 FHAD1B1AJZ9 1412 aa20.87■□□□□ 0.93
HTR3D-204ENST00000453435 CHD1O14646 1710 aa20.85■□□□□ 0.93
HTR3D-204ENST00000453435 ADAMTS12P58397 1594 aa20.84■□□□□ 0.93
HTR3D-204ENST00000453435 RUSC2Q8N2Y8 1516 aa20.82■□□□□ 0.92
HTR3D-204ENST00000453435 CUL7Q14999 1698 aa20.8■□□□□ 0.92
HTR3D-204ENST00000453435 CARMIL1Q5VZK9 1371 aa20.79■□□□□ 0.92
HTR3D-204ENST00000453435 GRIN2AQ12879 1464 aa20.78■□□□□ 0.92
HTR3D-204ENST00000453435 EEA1Q15075 1411 aa20.77■□□□□ 0.91
HTR3D-204ENST00000453435 CSRNP3Q8WYN3 585 aa20.73■□□□□ 0.91
HTR3D-204ENST00000453435 FAM9AQ8IZU1 332 aaPredicted RBP20.68■□□□□ 0.9
HTR3D-204ENST00000453435 NUP160Q12769 1436 aa20.68■□□□□ 0.9
HTR3D-204ENST00000453435 RAPGEF2Q9Y4G8 1499 aa20.68■□□□□ 0.9
HTR3D-204ENST00000453435 CLASP1Q7Z460 1538 aa20.64■□□□□ 0.9
HTR3D-204ENST00000453435 CEP170Q5SW79 1584 aa20.63■□□□□ 0.89
HTR3D-204ENST00000453435 PRXQ9BXM0 1461 aa20.62■□□□□ 0.89
HTR3D-204ENST00000453435 KIAA0586Q9BVV6 1533 aa20.57■□□□□ 0.88
HTR3D-204ENST00000453435 JPH4Q96JJ6 628 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms