RNA–Protein interactions for RNA: ENST00000453135.1

LINC01647-201, Transcript of long intergenic non-protein coding RNA 1647, humanhuman

TSL 1 (best) BASIC

Gene LINC01647, Length 1,285 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01647-201ENST00000453135 AEBP2Q6ZN18 517 aaPredicted RBP22.28■■□□□ 1.16
LINC01647-201ENST00000453135 CHIC1Q5VXU3 224 aa21.77■■□□□ 1.08
LINC01647-201ENST00000453135 NISCHQ9Y2I1 1504 aa20.7■□□□□ 0.9
LINC01647-201ENST00000453135 PHF23Q9BUL5 403 aaPredicted RBP19.22■□□□□ 0.67
LINC01647-201ENST00000453135 SENP3Q9H4L4 574 aaPredicted RBP18.76■□□□□ 0.59
LINC01647-201ENST00000453135 CCDC180Q9P1Z9 1646 aa18.27■□□□□ 0.52
LINC01647-201ENST00000453135 ABCC9O60706 1549 aa17.78■□□□□ 0.44
LINC01647-201ENST00000453135 PLPPR3Q6T4P5 718 aa17.67■□□□□ 0.42
LINC01647-201ENST00000453135 FOXD1Q16676 465 aa17.48■□□□□ 0.39
LINC01647-201ENST00000453135 DCAF8L2P0C7V8 631 aa17.32■□□□□ 0.36
LINC01647-201ENST00000453135 ZCCHC6Q5VYS8 1495 aaKnown RBP17.27■□□□□ 0.36
LINC01647-201ENST00000453135 NACADO15069 1562 aa17.19■□□□□ 0.34
LINC01647-201ENST00000453135 RB1CC1Q8TDY2 1594 aa17.16■□□□□ 0.34
LINC01647-201ENST00000453135 MYO15BQ96JP2 1530 aa17.13■□□□□ 0.33
LINC01647-201ENST00000453135 DCAF1Q9Y4B6 1507 aa17.12■□□□□ 0.33
LINC01647-201ENST00000453135 PPP6R1Q9UPN7 881 aa16.93■□□□□ 0.3
LINC01647-201ENST00000453135 ADRA2BP18089 450 aa16.9■□□□□ 0.3
LINC01647-201ENST00000453135 SCRIBQ14160 1630 aa16.72■□□□□ 0.27
LINC01647-201ENST00000453135 UNC13AQ9UPW8 1703 aa16.7■□□□□ 0.26
LINC01647-201ENST00000453135 PABPN1Q86U42 306 aaKnown RBP eCLIP16.69■□□□□ 0.26
LINC01647-201ENST00000453135 BICRAQ9NZM4 1560 aa16.61■□□□□ 0.25
LINC01647-201ENST00000453135 SHROOM4Q9ULL8 1493 aa16.5■□□□□ 0.23
LINC01647-201ENST00000453135 PIAS4Q8N2W9 510 aaPredicted RBP16.47■□□□□ 0.23
LINC01647-201ENST00000453135 DNAJC5BQ9UF47 199 aa16.19■□□□□ 0.18
LINC01647-201ENST00000453135 EIF4G1Q04637 1599 aaKnown RBP16.17■□□□□ 0.18
LINC01647-201ENST00000453135 CECR2Q9BXF3 1484 aa16.11■□□□□ 0.17
LINC01647-201ENST00000453135 CC2D2AQ9P2K1 1620 aa16.06■□□□□ 0.16
LINC01647-201ENST00000453135 BAZ1AQ9NRL2 1556 aaPredicted RBP16.03■□□□□ 0.16
LINC01647-201ENST00000453135 SMARCA4P51532 1647 aa16.01■□□□□ 0.15
LINC01647-201ENST00000453135 MSH5O43196 834 aa15.99■□□□□ 0.15
LINC01647-201ENST00000453135 MROH2BQ7Z745 1585 aa15.96■□□□□ 0.14
LINC01647-201ENST00000453135 ATAD2BQ9ULI0 1458 aa15.91■□□□□ 0.14
LINC01647-201ENST00000453135 SMARCA2P51531 1590 aa15.88■□□□□ 0.13
LINC01647-201ENST00000453135 NCAPD3P42695 1498 aa15.87■□□□□ 0.13
LINC01647-201ENST00000453135 RSF1Q96T23 1441 aaPredicted RBP15.85■□□□□ 0.13
LINC01647-201ENST00000453135 PEG3Q9GZU2 1588 aa15.84■□□□□ 0.13
LINC01647-201ENST00000453135 HMGXB3Q12766 1538 aa15.78■□□□□ 0.12
LINC01647-201ENST00000453135 BAZ1BQ9UIG0 1483 aaKnown RBP15.78■□□□□ 0.12
LINC01647-201ENST00000453135 WIZO95785 1651 aa15.77■□□□□ 0.12
LINC01647-201ENST00000453135 SUPT5HO00267 1087 aaKnown RBP15.65■□□□□ 0.1
LINC01647-201ENST00000453135 TOP2AP11388 1531 aaKnown RBP15.63■□□□□ 0.09
LINC01647-201ENST00000453135 PPP4R3CPQ6ZMV5 832 aa15.62■□□□□ 0.09
LINC01647-201ENST00000453135 CCDC88BA6NC98 1476 aa15.47■□□□□ 0.07
LINC01647-201ENST00000453135 CADPSQ9ULU8 1353 aa15.45■□□□□ 0.06
LINC01647-201ENST00000453135 NESP48681 1621 aa15.43■□□□□ 0.06
LINC01647-201ENST00000453135 KCNA4P22459 653 aa15.41■□□□□ 0.06
LINC01647-201ENST00000453135 LAMC3Q9Y6N6 1575 aa15.41■□□□□ 0.06
LINC01647-201ENST00000453135 CFTRP13569 1480 aa15.37■□□□□ 0.05
LINC01647-201ENST00000453135 PDS5BQ9NTI5 1447 aa15.34■□□□□ 0.05
LINC01647-201ENST00000453135 ERCC6Q03468 1493 aa15.33■□□□□ 0.05
LINC01647-201ENST00000453135 MAPK8IP2Q13387 824 aaPredicted RBP15.32■□□□□ 0.04
LINC01647-201ENST00000453135 SCAF1Q9H7N4 1312 aaKnown RBP15.3■□□□□ 0.04
LINC01647-201ENST00000453135 FANCD2Q9BXW9 1451 aa15.25■□□□□ 0.03
LINC01647-201ENST00000453135 CEP164Q9UPV0 1460 aa15.2■□□□□ 0.02
LINC01647-201ENST00000453135 KIF21AQ7Z4S6 1674 aa15.2■□□□□ 0.02
LINC01647-201ENST00000453135 PRDM2Q13029 1718 aa15.17■□□□□ 0.02
LINC01647-201ENST00000453135 MRC2Q9UBG0 1479 aa15.14■□□□□ 0.01
LINC01647-201ENST00000453135 NCBP3Q53F19 620 aaKnown RBP15.14■□□□□ 0.01
LINC01647-201ENST00000453135 CNKSR2Q8WXI2 1034 aa15.12■□□□□ 0.01
LINC01647-201ENST00000453135 THOC2Q8NI27 1593 aaKnown RBP15.11■□□□□ 0.01
LINC01647-201ENST00000453135 CUX2O14529 1486 aa15.08■□□□□ 0.01
LINC01647-201ENST00000453135 WDR62O43379 1518 aa15.07■□□□□ 0
LINC01647-201ENST00000453135 URB2Q14146 1524 aaKnown RBP15.07■□□□□ 0
LINC01647-201ENST00000453135 NPM3O75607 178 aaKnown RBP15.04■□□□□ -0
LINC01647-201ENST00000453135 ABCC8Q09428 1581 aa15.03■□□□□ -0
LINC01647-201ENST00000453135 DMRT2Q9Y5R5 561 aa15.03■□□□□ -0
LINC01647-201ENST00000453135 TOPBP1Q92547 1522 aa15.02□□□□□ -0.01
LINC01647-201ENST00000453135 DNMBPQ6XZF7 1577 aa15□□□□□ -0.01
LINC01647-201ENST00000453135 CUX1P39880 1505 aa14.96□□□□□ -0.02
LINC01647-201ENST00000453135 WRNQ14191 1432 aaPredicted RBP eCLIP14.95□□□□□ -0.02
LINC01647-201ENST00000453135 POLA1P09884 1462 aaPredicted RBP14.89□□□□□ -0.03
LINC01647-201ENST00000453135 FGD5Q6ZNL6 1462 aa14.89□□□□□ -0.03
LINC01647-201ENST00000453135 IFT140Q96RY7 1462 aa14.89□□□□□ -0.03
LINC01647-201ENST00000453135 SOGA1O94964 1423 aa14.87□□□□□ -0.03
LINC01647-201ENST00000453135 SYNJ1O43426 1573 aa14.86□□□□□ -0.03
LINC01647-201ENST00000453135 TOP2BQ02880 1626 aa14.86□□□□□ -0.03
LINC01647-201ENST00000453135 RAD54L2Q9Y4B4 1467 aa14.85□□□□□ -0.03
LINC01647-201ENST00000453135 BIVM-ERCC5R4GMW8 1640 aa14.84□□□□□ -0.03
LINC01647-201ENST00000453135 RNF216Q9NWF9 866 aaPredicted RBP14.81□□□□□ -0.04
LINC01647-201ENST00000453135 TARBP1Q13395 1621 aaKnown RBP14.81□□□□□ -0.04
LINC01647-201ENST00000453135 ZNF608Q9ULD9 1512 aaPredicted RBP14.8□□□□□ -0.04
LINC01647-201ENST00000453135 TDRD9Q8NDG6 1382 aaKnown RBP14.77□□□□□ -0.04
LINC01647-201ENST00000453135 TRIM41Q8WV44 630 aa14.77□□□□□ -0.05
LINC01647-201ENST00000453135 ABCA10Q8WWZ4 1543 aa14.76□□□□□ -0.05
LINC01647-201ENST00000453135 AQRO60306 1485 aaKnown RBP eCLIP14.76□□□□□ -0.05
LINC01647-201ENST00000453135 HOXD11P31277 338 aaPredicted RBP14.75□□□□□ -0.05
LINC01647-201ENST00000453135 EIF4G3O43432 1585 aaKnown RBP14.71□□□□□ -0.05
LINC01647-201ENST00000453135 WDR97A6NE52 1622 aa14.7□□□□□ -0.06
LINC01647-201ENST00000453135 GAPVD1Q14C86 1478 aa14.69□□□□□ -0.06
LINC01647-201ENST00000453135 GRIN2BQ13224 1484 aa14.66□□□□□ -0.06
LINC01647-201ENST00000453135 ABCA5Q8WWZ7 1642 aa14.64□□□□□ -0.07
LINC01647-201ENST00000453135 SLC4A1APQ9BWU0 796 aaKnown RBP14.64□□□□□ -0.07
LINC01647-201ENST00000453135 KIF27Q86VH2 1401 aa14.64□□□□□ -0.07
LINC01647-201ENST00000453135 SNAPC4Q5SXM2 1469 aa14.61□□□□□ -0.07
LINC01647-201ENST00000453135 MAGI1Q96QZ7 1491 aaPredicted RBP14.59□□□□□ -0.07
LINC01647-201ENST00000453135 FBLN2P98095 1184 aa14.59□□□□□ -0.07
LINC01647-201ENST00000453135 CHMP7Q8WUX9 453 aaPredicted RBP14.58□□□□□ -0.08
LINC01647-201ENST00000453135 PBRM1Q86U86 1689 aa14.58□□□□□ -0.08
LINC01647-201ENST00000453135 ERICH3Q5RHP9 1530 aa14.57□□□□□ -0.08
LINC01647-201ENST00000453135 IGF1RP08069 1367 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms