RNA–Protein interactions for RNA: ENST00000452830.5

TRO-217, Transcript of trophinin, humanhuman

TSL 2

Gene TRO, Length 976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-217ENST00000452830 NISCHQ9Y2I1 1504 aa23.37■■□□□ 1.33
TRO-217ENST00000452830 CCDC180Q9P1Z9 1646 aa20.38■□□□□ 0.85
TRO-217ENST00000452830 ZCCHC6Q5VYS8 1495 aaKnown RBP19.6■□□□□ 0.73
TRO-217ENST00000452830 ABCC9O60706 1549 aa19.37■□□□□ 0.69
TRO-217ENST00000452830 DCAF1Q9Y4B6 1507 aa19.35■□□□□ 0.69
TRO-217ENST00000452830 DCAF8L2P0C7V8 631 aa19.27■□□□□ 0.68
TRO-217ENST00000452830 MYO15BQ96JP2 1530 aa19.17■□□□□ 0.66
TRO-217ENST00000452830 NACADO15069 1562 aa19.06■□□□□ 0.64
TRO-217ENST00000452830 SHROOM4Q9ULL8 1493 aa18.9■□□□□ 0.62
TRO-217ENST00000452830 RB1CC1Q8TDY2 1594 aa18.89■□□□□ 0.61
TRO-217ENST00000452830 SCRIBQ14160 1630 aa18.7■□□□□ 0.58
TRO-217ENST00000452830 UNC13AQ9UPW8 1703 aa18.46■□□□□ 0.55
TRO-217ENST00000452830 BICRAQ9NZM4 1560 aa18.34■□□□□ 0.53
TRO-217ENST00000452830 PABPN1Q86U42 306 aaKnown RBP eCLIP18.28■□□□□ 0.52
TRO-217ENST00000452830 CECR2Q9BXF3 1484 aa18.16■□□□□ 0.5
TRO-217ENST00000452830 SUPT5HO00267 1087 aaKnown RBP18.16■□□□□ 0.5
TRO-217ENST00000452830 RSF1Q96T23 1441 aaPredicted RBP18.1■□□□□ 0.49
TRO-217ENST00000452830 MROH2BQ7Z745 1585 aa18.04■□□□□ 0.48
TRO-217ENST00000452830 BAZ1AQ9NRL2 1556 aaPredicted RBP18.03■□□□□ 0.48
TRO-217ENST00000452830 SMARCA4P51532 1647 aa17.95■□□□□ 0.46
TRO-217ENST00000452830 WIZO95785 1651 aa17.85■□□□□ 0.45
TRO-217ENST00000452830 PEG3Q9GZU2 1588 aa17.79■□□□□ 0.44
TRO-217ENST00000452830 EIF4G1Q04637 1599 aaKnown RBP17.78■□□□□ 0.44
TRO-217ENST00000452830 ATAD2BQ9ULI0 1458 aa17.73■□□□□ 0.43
TRO-217ENST00000452830 TOP2AP11388 1531 aaKnown RBP17.68■□□□□ 0.42
TRO-217ENST00000452830 SMARCA2P51531 1590 aa17.68■□□□□ 0.42
TRO-217ENST00000452830 NCAPD3P42695 1498 aa17.62■□□□□ 0.41
TRO-217ENST00000452830 BAZ1BQ9UIG0 1483 aaKnown RBP17.58■□□□□ 0.41
TRO-217ENST00000452830 CC2D2AQ9P2K1 1620 aa17.54■□□□□ 0.4
TRO-217ENST00000452830 HMGXB3Q12766 1538 aa17.53■□□□□ 0.4
TRO-217ENST00000452830 CCDC88BA6NC98 1476 aa17.53■□□□□ 0.4
TRO-217ENST00000452830 CHIC1Q5VXU3 224 aa17.39■□□□□ 0.37
TRO-217ENST00000452830 DNAJC5BQ9UF47 199 aa17.27■□□□□ 0.36
TRO-217ENST00000452830 CFTRP13569 1480 aa17.18■□□□□ 0.34
TRO-217ENST00000452830 CADPSQ9ULU8 1353 aa17.15■□□□□ 0.34
TRO-217ENST00000452830 TRIM41Q8WV44 630 aa17.11■□□□□ 0.33
TRO-217ENST00000452830 ABCC8Q09428 1581 aa17.06■□□□□ 0.32
TRO-217ENST00000452830 WRNQ14191 1432 aaPredicted RBP eCLIP17■□□□□ 0.31
TRO-217ENST00000452830 NESP48681 1621 aa16.99■□□□□ 0.31
TRO-217ENST00000452830 PRDM2Q13029 1718 aa16.99■□□□□ 0.31
TRO-217ENST00000452830 LAMC3Q9Y6N6 1575 aa16.98■□□□□ 0.31
TRO-217ENST00000452830 SYNJ1O43426 1573 aa16.93■□□□□ 0.3
TRO-217ENST00000452830 FANCD2Q9BXW9 1451 aa16.93■□□□□ 0.3
TRO-217ENST00000452830 TOP2BQ02880 1626 aa16.88■□□□□ 0.29
TRO-217ENST00000452830 PDS5BQ9NTI5 1447 aa16.87■□□□□ 0.29
TRO-217ENST00000452830 CUX1P39880 1505 aa16.87■□□□□ 0.29
TRO-217ENST00000452830 BIVM-ERCC5R4GMW8 1640 aa16.85■□□□□ 0.29
TRO-217ENST00000452830 CEP164Q9UPV0 1460 aa16.8■□□□□ 0.28
TRO-217ENST00000452830 SOGA1O94964 1423 aa16.77■□□□□ 0.27
TRO-217ENST00000452830 FAM9AQ8IZU1 332 aaPredicted RBP16.76■□□□□ 0.27
TRO-217ENST00000452830 DNMBPQ6XZF7 1577 aa16.73■□□□□ 0.27
TRO-217ENST00000452830 KIF21AQ7Z4S6 1674 aa16.73■□□□□ 0.27
TRO-217ENST00000452830 URB2Q14146 1524 aaKnown RBP16.73■□□□□ 0.27
TRO-217ENST00000452830 TOPBP1Q92547 1522 aa16.73■□□□□ 0.27
TRO-217ENST00000452830 EEA1Q15075 1411 aa16.71■□□□□ 0.27
TRO-217ENST00000452830 RUSC2Q8N2Y8 1516 aa16.71■□□□□ 0.27
TRO-217ENST00000452830 LOC105371045A0A1W2PR82 267 aa16.7■□□□□ 0.26
TRO-217ENST00000452830 FGD5Q6ZNL6 1462 aa16.69■□□□□ 0.26
TRO-217ENST00000452830 CSRNP3Q8WYN3 585 aa16.66■□□□□ 0.26
TRO-217ENST00000452830 MRC2Q9UBG0 1479 aa16.65■□□□□ 0.26
TRO-217ENST00000452830 POLA1P09884 1462 aaPredicted RBP16.63■□□□□ 0.25
TRO-217ENST00000452830 KIF27Q86VH2 1401 aa16.6■□□□□ 0.25
TRO-217ENST00000452830 ERCC6Q03468 1493 aa16.6■□□□□ 0.25
TRO-217ENST00000452830 RAD54L2Q9Y4B4 1467 aa16.58■□□□□ 0.24
TRO-217ENST00000452830 WDR62O43379 1518 aa16.57■□□□□ 0.24
TRO-217ENST00000452830 ABCA10Q8WWZ4 1543 aa16.56■□□□□ 0.24
TRO-217ENST00000452830 CUX2O14529 1486 aa16.55■□□□□ 0.24
TRO-217ENST00000452830 THOC2Q8NI27 1593 aaKnown RBP16.52■□□□□ 0.24
TRO-217ENST00000452830 IGF1RP08069 1367 aa16.51■□□□□ 0.23
TRO-217ENST00000452830 KIF21BO75037 1637 aa16.48■□□□□ 0.23
TRO-217ENST00000452830 TARBP1Q13395 1621 aaKnown RBP16.48■□□□□ 0.23
TRO-217ENST00000452830 PRXQ9BXM0 1461 aa16.48■□□□□ 0.23
TRO-217ENST00000452830 EHMT2Q96KQ7 1210 aa16.47■□□□□ 0.23
TRO-217ENST00000452830 WDR97A6NE52 1622 aa16.47■□□□□ 0.23
TRO-217ENST00000452830 GOLGA3Q08378 1498 aa16.46■□□□□ 0.23
TRO-217ENST00000452830 IFT140Q96RY7 1462 aa16.44■□□□□ 0.22
TRO-217ENST00000452830 TDRD9Q8NDG6 1382 aaKnown RBP16.43■□□□□ 0.22
TRO-217ENST00000452830 RAPGEF2Q9Y4G8 1499 aa16.42■□□□□ 0.22
TRO-217ENST00000452830 TNIKQ9UKE5 1360 aa16.42■□□□□ 0.22
TRO-217ENST00000452830 ABCA5Q8WWZ7 1642 aa16.41■□□□□ 0.22
TRO-217ENST00000452830 ERICH3Q5RHP9 1530 aa16.4■□□□□ 0.22
TRO-217ENST00000452830 GAPVD1Q14C86 1478 aa16.4■□□□□ 0.22
TRO-217ENST00000452830 CARMIL1Q5VZK9 1371 aa16.38■□□□□ 0.21
TRO-217ENST00000452830 UBTFP17480 764 aaKnown RBP16.38■□□□□ 0.21
TRO-217ENST00000452830 AQRO60306 1485 aaKnown RBP eCLIP16.35■□□□□ 0.21
TRO-217ENST00000452830 ZNF608Q9ULD9 1512 aaPredicted RBP16.35■□□□□ 0.21
TRO-217ENST00000452830 CUL7Q14999 1698 aa16.3■□□□□ 0.2
TRO-217ENST00000452830 GRIN2BQ13224 1484 aa16.29■□□□□ 0.2
TRO-217ENST00000452830 CEP162Q5TB80 1403 aa16.28■□□□□ 0.2
TRO-217ENST00000452830 PBRM1Q86U86 1689 aa16.25■□□□□ 0.19
TRO-217ENST00000452830 EIF4G3O43432 1585 aaKnown RBP16.25■□□□□ 0.19
TRO-217ENST00000452830 FHAD1B1AJZ9 1412 aa16.23■□□□□ 0.19
TRO-217ENST00000452830 ADAMTS12P58397 1594 aa16.2■□□□□ 0.18
TRO-217ENST00000452830 CLIP1P30622 1438 aa16.19■□□□□ 0.18
TRO-217ENST00000452830 SNAPC4Q5SXM2 1469 aa16.17■□□□□ 0.18
TRO-217ENST00000452830 MAGI1Q96QZ7 1491 aaPredicted RBP16.16■□□□□ 0.18
TRO-217ENST00000452830 DNAJC5Q9H3Z4 198 aa16.12■□□□□ 0.17
TRO-217ENST00000452830 SYNJ2O15056 1496 aa16.1■□□□□ 0.17
TRO-217ENST00000452830 RANGAP1P46060 587 aaPredicted RBP16.1■□□□□ 0.17
TRO-217ENST00000452830 GRIN2AQ12879 1464 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms