RNA–Protein interactions for RNA: ENST00000452706.6

FAM107B-208, Transcript of family with sequence similarity 107 member B, humanhuman

TSL 2

Gene FAM107B, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM107B-208ENST00000452706 AEBP2Q6ZN18 517 aaPredicted RBP17.63■□□□□ 0.41
FAM107B-208ENST00000452706 CHIC1Q5VXU3 224 aa17.28■□□□□ 0.36
FAM107B-208ENST00000452706 NISCHQ9Y2I1 1504 aa16.19■□□□□ 0.18
FAM107B-208ENST00000452706 PHF23Q9BUL5 403 aaPredicted RBP15.16■□□□□ 0.02
FAM107B-208ENST00000452706 SENP3Q9H4L4 574 aaPredicted RBP15.02■□□□□ -0
FAM107B-208ENST00000452706 CCDC180Q9P1Z9 1646 aa14.63□□□□□ -0.07
FAM107B-208ENST00000452706 ABCC9O60706 1549 aa14.34□□□□□ -0.11
FAM107B-208ENST00000452706 PLPPR3Q6T4P5 718 aa14.08□□□□□ -0.16
FAM107B-208ENST00000452706 FOXD1Q16676 465 aa13.89□□□□□ -0.19
FAM107B-208ENST00000452706 RB1CC1Q8TDY2 1594 aa13.82□□□□□ -0.2
FAM107B-208ENST00000452706 NACADO15069 1562 aa13.75□□□□□ -0.21
FAM107B-208ENST00000452706 MYO15BQ96JP2 1530 aa13.61□□□□□ -0.23
FAM107B-208ENST00000452706 UNC13AQ9UPW8 1703 aa13.56□□□□□ -0.24
FAM107B-208ENST00000452706 DCAF8L2P0C7V8 631 aa13.47□□□□□ -0.25
FAM107B-208ENST00000452706 ZCCHC6Q5VYS8 1495 aaKnown RBP13.47□□□□□ -0.25
FAM107B-208ENST00000452706 DCAF1Q9Y4B6 1507 aa13.46□□□□□ -0.25
FAM107B-208ENST00000452706 ADRA2BP18089 450 aa13.37□□□□□ -0.27
FAM107B-208ENST00000452706 PPP6R1Q9UPN7 881 aa13.36□□□□□ -0.27
FAM107B-208ENST00000452706 BICRAQ9NZM4 1560 aa13.36□□□□□ -0.27
FAM107B-208ENST00000452706 SHROOM4Q9ULL8 1493 aa13.29□□□□□ -0.28
FAM107B-208ENST00000452706 PABPN1Q86U42 306 aaKnown RBP eCLIP13.28□□□□□ -0.28
FAM107B-208ENST00000452706 DNAJC5BQ9UF47 199 aa13.25□□□□□ -0.29
FAM107B-208ENST00000452706 SCRIBQ14160 1630 aa13.22□□□□□ -0.29
FAM107B-208ENST00000452706 PIAS4Q8N2W9 510 aaPredicted RBP13.14□□□□□ -0.31
FAM107B-208ENST00000452706 EIF4G1Q04637 1599 aaKnown RBP13.04□□□□□ -0.32
FAM107B-208ENST00000452706 CC2D2AQ9P2K1 1620 aa13.04□□□□□ -0.32
FAM107B-208ENST00000452706 CECR2Q9BXF3 1484 aa12.94□□□□□ -0.34
FAM107B-208ENST00000452706 MSH5O43196 834 aa12.94□□□□□ -0.34
FAM107B-208ENST00000452706 SMARCA4P51532 1647 aa12.66□□□□□ -0.38
FAM107B-208ENST00000452706 SMARCA2P51531 1590 aa12.62□□□□□ -0.39
FAM107B-208ENST00000452706 BAZ1AQ9NRL2 1556 aaPredicted RBP12.62□□□□□ -0.39
FAM107B-208ENST00000452706 NCAPD3P42695 1498 aa12.62□□□□□ -0.39
FAM107B-208ENST00000452706 HMGXB3Q12766 1538 aa12.61□□□□□ -0.39
FAM107B-208ENST00000452706 ATAD2BQ9ULI0 1458 aa12.59□□□□□ -0.39
FAM107B-208ENST00000452706 POTEDQ86YR6 584 aa12.58□□□□□ -0.4
FAM107B-208ENST00000452706 PEG3Q9GZU2 1588 aa12.56□□□□□ -0.4
FAM107B-208ENST00000452706 BAZ1BQ9UIG0 1483 aaKnown RBP12.49□□□□□ -0.41
FAM107B-208ENST00000452706 MROH2BQ7Z745 1585 aa12.44□□□□□ -0.42
FAM107B-208ENST00000452706 ERCC6Q03468 1493 aa12.42□□□□□ -0.42
FAM107B-208ENST00000452706 CUX2O14529 1486 aa12.41□□□□□ -0.42
FAM107B-208ENST00000452706 LAMC3Q9Y6N6 1575 aa12.39□□□□□ -0.43
FAM107B-208ENST00000452706 PPP4R3CPQ6ZMV5 832 aa12.38□□□□□ -0.43
FAM107B-208ENST00000452706 WIZO95785 1651 aa12.35□□□□□ -0.43
FAM107B-208ENST00000452706 NESP48681 1621 aa12.34□□□□□ -0.43
FAM107B-208ENST00000452706 SCAF1Q9H7N4 1312 aaKnown RBP12.32□□□□□ -0.44
FAM107B-208ENST00000452706 THOC2Q8NI27 1593 aaKnown RBP12.31□□□□□ -0.44
FAM107B-208ENST00000452706 KIF21AQ7Z4S6 1674 aa12.31□□□□□ -0.44
FAM107B-208ENST00000452706 PDS5BQ9NTI5 1447 aa12.26□□□□□ -0.45
FAM107B-208ENST00000452706 TOP2AP11388 1531 aaKnown RBP12.22□□□□□ -0.45
FAM107B-208ENST00000452706 CADPSQ9ULU8 1353 aa12.21□□□□□ -0.45
FAM107B-208ENST00000452706 RSF1Q96T23 1441 aaPredicted RBP12.2□□□□□ -0.46
FAM107B-208ENST00000452706 PRDM2Q13029 1718 aa12.2□□□□□ -0.46
FAM107B-208ENST00000452706 DNAJC5Q9H3Z4 198 aa12.18□□□□□ -0.46
FAM107B-208ENST00000452706 MRC2Q9UBG0 1479 aa12.15□□□□□ -0.46
FAM107B-208ENST00000452706 WDR62O43379 1518 aa12.15□□□□□ -0.46
FAM107B-208ENST00000452706 CEP164Q9UPV0 1460 aa12.14□□□□□ -0.47
FAM107B-208ENST00000452706 CFTRP13569 1480 aa12.12□□□□□ -0.47
FAM107B-208ENST00000452706 MAPK8IP2Q13387 824 aaPredicted RBP12.11□□□□□ -0.47
FAM107B-208ENST00000452706 NCBP3Q53F19 620 aaKnown RBP12.11□□□□□ -0.47
FAM107B-208ENST00000452706 FANCD2Q9BXW9 1451 aa12.1□□□□□ -0.47
FAM107B-208ENST00000452706 KCNA4P22459 653 aa12.1□□□□□ -0.47
FAM107B-208ENST00000452706 CNKSR2Q8WXI2 1034 aa12.05□□□□□ -0.48
FAM107B-208ENST00000452706 CCDC88BA6NC98 1476 aa12.01□□□□□ -0.49
FAM107B-208ENST00000452706 URB2Q14146 1524 aaKnown RBP11.98□□□□□ -0.49
FAM107B-208ENST00000452706 DMRT2Q9Y5R5 561 aa11.97□□□□□ -0.49
FAM107B-208ENST00000452706 ABCC8Q09428 1581 aa11.92□□□□□ -0.5
FAM107B-208ENST00000452706 DNMBPQ6XZF7 1577 aa11.9□□□□□ -0.5
FAM107B-208ENST00000452706 TOPBP1Q92547 1522 aa11.89□□□□□ -0.51
FAM107B-208ENST00000452706 IFT140Q96RY7 1462 aa11.89□□□□□ -0.51
FAM107B-208ENST00000452706 NPM3O75607 178 aaKnown RBP11.87□□□□□ -0.51
FAM107B-208ENST00000452706 EIF4G3O43432 1585 aaKnown RBP11.84□□□□□ -0.51
FAM107B-208ENST00000452706 TARBP1Q13395 1621 aaKnown RBP11.81□□□□□ -0.52
FAM107B-208ENST00000452706 RNF216Q9NWF9 866 aaPredicted RBP11.8□□□□□ -0.52
FAM107B-208ENST00000452706 WDR97A6NE52 1622 aa11.79□□□□□ -0.52
FAM107B-208ENST00000452706 ZNF608Q9ULD9 1512 aaPredicted RBP11.79□□□□□ -0.52
FAM107B-208ENST00000452706 POLA1P09884 1462 aaPredicted RBP11.76□□□□□ -0.53
FAM107B-208ENST00000452706 OSCARQ8IYS5 282 aa11.76□□□□□ -0.53
FAM107B-208ENST00000452706 CHD1O14646 1710 aa11.75□□□□□ -0.53
FAM107B-208ENST00000452706 HOXD11P31277 338 aaPredicted RBP11.73□□□□□ -0.53
FAM107B-208ENST00000452706 CUX1P39880 1505 aa11.7□□□□□ -0.54
FAM107B-208ENST00000452706 FGD5Q6ZNL6 1462 aa11.7□□□□□ -0.54
FAM107B-208ENST00000452706 RIMBP3CA6NJZ7 1639 aa11.69□□□□□ -0.54
FAM107B-208ENST00000452706 RIMBP3BA6NNM3 1639 aa11.69□□□□□ -0.54
FAM107B-208ENST00000452706 RIMBP3Q9UFD9 1639 aa11.69□□□□□ -0.54
FAM107B-208ENST00000452706 PBRM1Q86U86 1689 aa11.68□□□□□ -0.54
FAM107B-208ENST00000452706 SOGA1O94964 1423 aa11.68□□□□□ -0.54
FAM107B-208ENST00000452706 AQRO60306 1485 aaKnown RBP eCLIP11.67□□□□□ -0.546e-7■□□□□ 11.3
FAM107B-208ENST00000452706 RAD54L2Q9Y4B4 1467 aa11.66□□□□□ -0.54
FAM107B-208ENST00000452706 SUPT5HO00267 1087 aaKnown RBP11.64□□□□□ -0.55
FAM107B-208ENST00000452706 TRIM41Q8WV44 630 aa11.64□□□□□ -0.55
FAM107B-208ENST00000452706 ARHGEF11O15085 1522 aa11.64□□□□□ -0.55
FAM107B-208ENST00000452706 BIVM-ERCC5R4GMW8 1640 aa11.64□□□□□ -0.55
FAM107B-208ENST00000452706 MAGI1Q96QZ7 1491 aaPredicted RBP11.63□□□□□ -0.55
FAM107B-208ENST00000452706 ABCA5Q8WWZ7 1642 aa11.62□□□□□ -0.55
FAM107B-208ENST00000452706 SNAPC4Q5SXM2 1469 aa11.62□□□□□ -0.55
FAM107B-208ENST00000452706 GRIN2BQ13224 1484 aa11.61□□□□□ -0.55
FAM107B-208ENST00000452706 SYNJ1O43426 1573 aa11.61□□□□□ -0.55
FAM107B-208ENST00000452706 TOP2BQ02880 1626 aa11.6□□□□□ -0.55
FAM107B-208ENST00000452706 TDRD9Q8NDG6 1382 aaKnown RBP11.6□□□□□ -0.55
FAM107B-208ENST00000452706 ABCA10Q8WWZ4 1543 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms