RNA–Protein interactions for RNA: ENST00000452161.5

EFEMP1-209, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

TSL 4

Gene EFEMP1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-209ENST00000452161 NISCHQ9Y2I1 1504 aa32.87■■■□□ 2.85
EFEMP1-209ENST00000452161 CCDC180Q9P1Z9 1646 aa29.09■■■□□ 2.25
EFEMP1-209ENST00000452161 ABCC9O60706 1549 aa28.2■■■□□ 2.1
EFEMP1-209ENST00000452161 ZCCHC6Q5VYS8 1495 aaKnown RBP27.4■■□□□ 1.98
EFEMP1-209ENST00000452161 NACADO15069 1562 aa27.35■■□□□ 1.97
EFEMP1-209ENST00000452161 MYO15BQ96JP2 1530 aa27.32■■□□□ 1.96
EFEMP1-209ENST00000452161 DCAF8L2P0C7V8 631 aa27.31■■□□□ 1.96
EFEMP1-209ENST00000452161 RB1CC1Q8TDY2 1594 aa27.29■■□□□ 1.96
EFEMP1-209ENST00000452161 DCAF1Q9Y4B6 1507 aa27.26■■□□□ 1.96
EFEMP1-209ENST00000452161 UNC13AQ9UPW8 1703 aa26.61■■□□□ 1.85
EFEMP1-209ENST00000452161 SCRIBQ14160 1630 aa26.47■■□□□ 1.83
EFEMP1-209ENST00000452161 BICRAQ9NZM4 1560 aa26.45■■□□□ 1.82
EFEMP1-209ENST00000452161 PABPN1Q86U42 306 aaKnown RBP eCLIP26.42■■□□□ 1.82
EFEMP1-209ENST00000452161 SHROOM4Q9ULL8 1493 aa26.26■■□□□ 1.79
EFEMP1-209ENST00000452161 DNAJC5BQ9UF47 199 aa25.76■■□□□ 1.71
EFEMP1-209ENST00000452161 EIF4G1Q04637 1599 aaKnown RBP25.72■■□□□ 1.71
EFEMP1-209ENST00000452161 AEBP2Q6ZN18 517 aaPredicted RBP25.68■■□□□ 1.7
EFEMP1-209ENST00000452161 CC2D2AQ9P2K1 1620 aa25.55■■□□□ 1.68
EFEMP1-209ENST00000452161 CECR2Q9BXF3 1484 aa25.54■■□□□ 1.68
EFEMP1-209ENST00000452161 BAZ1AQ9NRL2 1556 aaPredicted RBP25.44■■□□□ 1.66
EFEMP1-209ENST00000452161 SMARCA4P51532 1647 aa25.41■■□□□ 1.66
EFEMP1-209ENST00000452161 MROH2BQ7Z745 1585 aa25.29■■□□□ 1.64
EFEMP1-209ENST00000452161 NCAPD3P42695 1498 aa25.27■■□□□ 1.64
EFEMP1-209ENST00000452161 ATAD2BQ9ULI0 1458 aa25.27■■□□□ 1.64
EFEMP1-209ENST00000452161 SMARCA2P51531 1590 aa25.23■■□□□ 1.63
EFEMP1-209ENST00000452161 PEG3Q9GZU2 1588 aa25.23■■□□□ 1.63
EFEMP1-209ENST00000452161 RSF1Q96T23 1441 aaPredicted RBP25.12■■□□□ 1.61
EFEMP1-209ENST00000452161 HMGXB3Q12766 1538 aa25.11■■□□□ 1.61
EFEMP1-209ENST00000452161 BAZ1BQ9UIG0 1483 aaKnown RBP25.02■■□□□ 1.6
EFEMP1-209ENST00000452161 WIZO95785 1651 aa25■■□□□ 1.59
EFEMP1-209ENST00000452161 CHIC1Q5VXU3 224 aa24.96■■□□□ 1.59
EFEMP1-209ENST00000452161 TOP2AP11388 1531 aaKnown RBP24.77■■□□□ 1.56
EFEMP1-209ENST00000452161 SUPT5HO00267 1087 aaKnown RBP24.58■■□□□ 1.53
EFEMP1-209ENST00000452161 CADPSQ9ULU8 1353 aa24.52■■□□□ 1.52
EFEMP1-209ENST00000452161 CCDC88BA6NC98 1476 aa24.51■■□□□ 1.51
EFEMP1-209ENST00000452161 LAMC3Q9Y6N6 1575 aa24.51■■□□□ 1.51
EFEMP1-209ENST00000452161 NESP48681 1621 aa24.47■■□□□ 1.51
EFEMP1-209ENST00000452161 CFTRP13569 1480 aa24.41■■□□□ 1.5
EFEMP1-209ENST00000452161 PDS5BQ9NTI5 1447 aa24.36■■□□□ 1.49
EFEMP1-209ENST00000452161 ERCC6Q03468 1493 aa24.29■■□□□ 1.48
EFEMP1-209ENST00000452161 FANCD2Q9BXW9 1451 aa24.19■■□□□ 1.46
EFEMP1-209ENST00000452161 PRDM2Q13029 1718 aa24.17■■□□□ 1.46
EFEMP1-209ENST00000452161 KIF21AQ7Z4S6 1674 aa24.17■■□□□ 1.46
EFEMP1-209ENST00000452161 CEP164Q9UPV0 1460 aa24.12■■□□□ 1.45
EFEMP1-209ENST00000452161 THOC2Q8NI27 1593 aaKnown RBP24.06■■□□□ 1.44
EFEMP1-209ENST00000452161 MRC2Q9UBG0 1479 aa24.05■■□□□ 1.44
EFEMP1-209ENST00000452161 CUX2O14529 1486 aa24.03■■□□□ 1.44
EFEMP1-209ENST00000452161 WDR62O43379 1518 aa23.96■■□□□ 1.43
EFEMP1-209ENST00000452161 URB2Q14146 1524 aaKnown RBP23.92■■□□□ 1.42
EFEMP1-209ENST00000452161 ABCC8Q09428 1581 aa23.91■■□□□ 1.42
EFEMP1-209ENST00000452161 TOPBP1Q92547 1522 aa23.82■■□□□ 1.4
EFEMP1-209ENST00000452161 DNMBPQ6XZF7 1577 aa23.81■■□□□ 1.4
EFEMP1-209ENST00000452161 CUX1P39880 1505 aa23.71■■□□□ 1.39
EFEMP1-209ENST00000452161 WRNQ14191 1432 aaPredicted RBP eCLIP23.66■■□□□ 1.38
EFEMP1-209ENST00000452161 IFT140Q96RY7 1462 aa23.64■■□□□ 1.38
EFEMP1-209ENST00000452161 POLA1P09884 1462 aaPredicted RBP23.63■■□□□ 1.37
EFEMP1-209ENST00000452161 FGD5Q6ZNL6 1462 aa23.59■■□□□ 1.37
EFEMP1-209ENST00000452161 TOP2BQ02880 1626 aa23.59■■□□□ 1.37
EFEMP1-209ENST00000452161 BIVM-ERCC5R4GMW8 1640 aa23.57■■□□□ 1.36
EFEMP1-209ENST00000452161 SOGA1O94964 1423 aa23.57■■□□□ 1.36
EFEMP1-209ENST00000452161 TARBP1Q13395 1621 aaKnown RBP23.55■■□□□ 1.36
EFEMP1-209ENST00000452161 SYNJ1O43426 1573 aa23.54■■□□□ 1.36
EFEMP1-209ENST00000452161 RAD54L2Q9Y4B4 1467 aa23.5■■□□□ 1.35
EFEMP1-209ENST00000452161 ZNF608Q9ULD9 1512 aaPredicted RBP23.46■■□□□ 1.35
EFEMP1-209ENST00000452161 ABCA10Q8WWZ4 1543 aa23.43■■□□□ 1.34
EFEMP1-209ENST00000452161 WDR97A6NE52 1622 aa23.42■■□□□ 1.34
EFEMP1-209ENST00000452161 AQRO60306 1485 aaKnown RBP eCLIP23.38■■□□□ 1.33
EFEMP1-209ENST00000452161 TDRD9Q8NDG6 1382 aaKnown RBP23.38■■□□□ 1.33
EFEMP1-209ENST00000452161 EIF4G3O43432 1585 aaKnown RBP23.35■■□□□ 1.33
EFEMP1-209ENST00000452161 GAPVD1Q14C86 1478 aa23.29■■□□□ 1.32
EFEMP1-209ENST00000452161 TRIM41Q8WV44 630 aa23.27■■□□□ 1.32
EFEMP1-209ENST00000452161 GRIN2BQ13224 1484 aa23.26■■□□□ 1.31
EFEMP1-209ENST00000452161 ABCA5Q8WWZ7 1642 aa23.26■■□□□ 1.31
EFEMP1-209ENST00000452161 MAGI1Q96QZ7 1491 aaPredicted RBP23.17■■□□□ 1.3
EFEMP1-209ENST00000452161 KIF27Q86VH2 1401 aa23.16■■□□□ 1.3
EFEMP1-209ENST00000452161 ERICH3Q5RHP9 1530 aa23.15■■□□□ 1.3
EFEMP1-209ENST00000452161 PBRM1Q86U86 1689 aa23.15■■□□□ 1.3
EFEMP1-209ENST00000452161 SNAPC4Q5SXM2 1469 aa23.14■■□□□ 1.29
EFEMP1-209ENST00000452161 OSCARQ8IYS5 282 aa23.12■■□□□ 1.29
EFEMP1-209ENST00000452161 IGF1RP08069 1367 aa23.09■■□□□ 1.29
EFEMP1-209ENST00000452161 DNAJC5Q9H3Z4 198 aa23.08■■□□□ 1.29
EFEMP1-209ENST00000452161 SYNJ2O15056 1496 aa23.08■■□□□ 1.29
EFEMP1-209ENST00000452161 CHMP7Q8WUX9 453 aaPredicted RBP23.07■■□□□ 1.28
EFEMP1-209ENST00000452161 FHAD1B1AJZ9 1412 aa23.05■■□□□ 1.28
EFEMP1-209ENST00000452161 FBLN2P98095 1184 aa23.03■■□□□ 1.28
EFEMP1-209ENST00000452161 CHD1O14646 1710 aa23■■□□□ 1.27
EFEMP1-209ENST00000452161 ADAMTS12P58397 1594 aa23■■□□□ 1.27
EFEMP1-209ENST00000452161 RUSC2Q8N2Y8 1516 aa22.98■■□□□ 1.27
EFEMP1-209ENST00000452161 CUL7Q14999 1698 aa22.94■■□□□ 1.26
EFEMP1-209ENST00000452161 GRIN2AQ12879 1464 aa22.94■■□□□ 1.26
EFEMP1-209ENST00000452161 CARMIL1Q5VZK9 1371 aa22.93■■□□□ 1.26
EFEMP1-209ENST00000452161 EEA1Q15075 1411 aa22.91■■□□□ 1.26
EFEMP1-209ENST00000452161 NUP160Q12769 1436 aa22.87■■□□□ 1.25
EFEMP1-209ENST00000452161 CSRNP3Q8WYN3 585 aa22.85■■□□□ 1.25
EFEMP1-209ENST00000452161 CLASP1Q7Z460 1538 aa22.82■■□□□ 1.24
EFEMP1-209ENST00000452161 RAPGEF2Q9Y4G8 1499 aa22.8■■□□□ 1.24
EFEMP1-209ENST00000452161 PRXQ9BXM0 1461 aa22.79■■□□□ 1.24
EFEMP1-209ENST00000452161 CEP170Q5SW79 1584 aa22.78■■□□□ 1.24
EFEMP1-209ENST00000452161 KIAA0586Q9BVV6 1533 aa22.72■■□□□ 1.23
EFEMP1-209ENST00000452161 FAM9AQ8IZU1 332 aaPredicted RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms