RNA–Protein interactions for RNA: ENST00000452034.5

KDM3A-206, Transcript of lysine demethylase 3A, humanhuman

TSL 5

Gene KDM3A, Length 709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-206ENST00000452034 NISCHQ9Y2I1 1504 aa36.91■■■■□ 3.5
KDM3A-206ENST00000452034 CCDC180Q9P1Z9 1646 aa32.67■■■□□ 2.82
KDM3A-206ENST00000452034 ABCC9O60706 1549 aa31.7■■■□□ 2.67
KDM3A-206ENST00000452034 ZCCHC6Q5VYS8 1495 aaKnown RBP30.84■■■□□ 2.53
KDM3A-206ENST00000452034 DCAF8L2P0C7V8 631 aa30.71■■■□□ 2.51
KDM3A-206ENST00000452034 NACADO15069 1562 aa30.59■■■□□ 2.49
KDM3A-206ENST00000452034 RB1CC1Q8TDY2 1594 aa30.58■■■□□ 2.49
KDM3A-206ENST00000452034 DCAF1Q9Y4B6 1507 aa30.5■■■□□ 2.47
KDM3A-206ENST00000452034 MYO15BQ96JP2 1530 aa30.47■■■□□ 2.47
KDM3A-206ENST00000452034 UNC13AQ9UPW8 1703 aa30■■■□□ 2.39
KDM3A-206ENST00000452034 SCRIBQ14160 1630 aa29.93■■■□□ 2.38
KDM3A-206ENST00000452034 BICRAQ9NZM4 1560 aa29.7■■■□□ 2.35
KDM3A-206ENST00000452034 PABPN1Q86U42 306 aaKnown RBP eCLIP29.67■■■□□ 2.34
KDM3A-206ENST00000452034 SHROOM4Q9ULL8 1493 aa29.46■■■□□ 2.31
KDM3A-206ENST00000452034 EIF4G1Q04637 1599 aaKnown RBP28.87■■■□□ 2.21
KDM3A-206ENST00000452034 CECR2Q9BXF3 1484 aa28.78■■■□□ 2.2
KDM3A-206ENST00000452034 DNAJC5BQ9UF47 199 aa28.77■■■□□ 2.2
KDM3A-206ENST00000452034 CC2D2AQ9P2K1 1620 aa28.68■■■□□ 2.18
KDM3A-206ENST00000452034 SMARCA4P51532 1647 aa28.61■■■□□ 2.17
KDM3A-206ENST00000452034 BAZ1AQ9NRL2 1556 aaPredicted RBP28.58■■■□□ 2.17
KDM3A-206ENST00000452034 MROH2BQ7Z745 1585 aa28.5■■■□□ 2.15
KDM3A-206ENST00000452034 ATAD2BQ9ULI0 1458 aa28.33■■■□□ 2.13
KDM3A-206ENST00000452034 SMARCA2P51531 1590 aa28.28■■■□□ 2.12
KDM3A-206ENST00000452034 PEG3Q9GZU2 1588 aa28.27■■■□□ 2.12
KDM3A-206ENST00000452034 RSF1Q96T23 1441 aaPredicted RBP28.26■■■□□ 2.11
KDM3A-206ENST00000452034 WIZO95785 1651 aa28.25■■■□□ 2.11
KDM3A-206ENST00000452034 NCAPD3P42695 1498 aa28.21■■■□□ 2.11
KDM3A-206ENST00000452034 HMGXB3Q12766 1538 aa28.14■■■□□ 2.1
KDM3A-206ENST00000452034 BAZ1BQ9UIG0 1483 aaKnown RBP28.13■■■□□ 2.09
KDM3A-206ENST00000452034 TOP2AP11388 1531 aaKnown RBP27.91■■■□□ 2.06
KDM3A-206ENST00000452034 SUPT5HO00267 1087 aaKnown RBP27.82■■■□□ 2.04
KDM3A-206ENST00000452034 CCDC88BA6NC98 1476 aa27.57■■■□□ 2
KDM3A-206ENST00000452034 NESP48681 1621 aa27.56■■■□□ 2
KDM3A-206ENST00000452034 LAMC3Q9Y6N6 1575 aa27.44■■□□□ 1.98
KDM3A-206ENST00000452034 CADPSQ9ULU8 1353 aa27.42■■□□□ 1.98
KDM3A-206ENST00000452034 CFTRP13569 1480 aa27.34■■□□□ 1.97
KDM3A-206ENST00000452034 KIF21AQ7Z4S6 1674 aa27.26■■□□□ 1.95
KDM3A-206ENST00000452034 ERCC6Q03468 1493 aa27.25■■□□□ 1.95
KDM3A-206ENST00000452034 PRDM2Q13029 1718 aa27.24■■□□□ 1.95
KDM3A-206ENST00000452034 PDS5BQ9NTI5 1447 aa27.21■■□□□ 1.95
KDM3A-206ENST00000452034 FANCD2Q9BXW9 1451 aa27.15■■□□□ 1.94
KDM3A-206ENST00000452034 CEP164Q9UPV0 1460 aa27.08■■□□□ 1.93
KDM3A-206ENST00000452034 THOC2Q8NI27 1593 aaKnown RBP27.05■■□□□ 1.92
KDM3A-206ENST00000452034 MRC2Q9UBG0 1479 aa26.97■■□□□ 1.91
KDM3A-206ENST00000452034 URB2Q14146 1524 aaKnown RBP26.9■■□□□ 1.9
KDM3A-206ENST00000452034 WDR62O43379 1518 aa26.88■■□□□ 1.89
KDM3A-206ENST00000452034 CUX2O14529 1486 aa26.8■■□□□ 1.88
KDM3A-206ENST00000452034 TOPBP1Q92547 1522 aa26.77■■□□□ 1.88
KDM3A-206ENST00000452034 DNMBPQ6XZF7 1577 aa26.76■■□□□ 1.87
KDM3A-206ENST00000452034 ABCC8Q09428 1581 aa26.75■■□□□ 1.87
KDM3A-206ENST00000452034 CUX1P39880 1505 aa26.71■■□□□ 1.87
KDM3A-206ENST00000452034 WRNQ14191 1432 aaPredicted RBP eCLIP26.63■■□□□ 1.85
KDM3A-206ENST00000452034 SYNJ1O43426 1573 aa26.62■■□□□ 1.85
KDM3A-206ENST00000452034 BIVM-ERCC5R4GMW8 1640 aa26.57■■□□□ 1.84
KDM3A-206ENST00000452034 POLA1P09884 1462 aaPredicted RBP26.56■■□□□ 1.84
KDM3A-206ENST00000452034 FGD5Q6ZNL6 1462 aa26.56■■□□□ 1.84
KDM3A-206ENST00000452034 TOP2BQ02880 1626 aa26.55■■□□□ 1.84
KDM3A-206ENST00000452034 IFT140Q96RY7 1462 aa26.48■■□□□ 1.83
KDM3A-206ENST00000452034 RAD54L2Q9Y4B4 1467 aa26.48■■□□□ 1.83
KDM3A-206ENST00000452034 TARBP1Q13395 1621 aaKnown RBP26.47■■□□□ 1.83
KDM3A-206ENST00000452034 SOGA1O94964 1423 aa26.42■■□□□ 1.82
KDM3A-206ENST00000452034 ZNF608Q9ULD9 1512 aaPredicted RBP26.4■■□□□ 1.82
KDM3A-206ENST00000452034 WDR97A6NE52 1622 aa26.37■■□□□ 1.81
KDM3A-206ENST00000452034 EIF4G3O43432 1585 aaKnown RBP26.32■■□□□ 1.8
KDM3A-206ENST00000452034 ABCA10Q8WWZ4 1543 aa26.28■■□□□ 1.8
KDM3A-206ENST00000452034 TDRD9Q8NDG6 1382 aaKnown RBP26.27■■□□□ 1.8
KDM3A-206ENST00000452034 AQRO60306 1485 aaKnown RBP eCLIP26.27■■□□□ 1.83e-8■■■■□ 21.7
KDM3A-206ENST00000452034 TRIM41Q8WV44 630 aa26.2■■□□□ 1.78
KDM3A-206ENST00000452034 ABCA5Q8WWZ7 1642 aa26.2■■□□□ 1.78
KDM3A-206ENST00000452034 CHIC1Q5VXU3 224 aa26.14■■□□□ 1.78
KDM3A-206ENST00000452034 PBRM1Q86U86 1689 aa26.14■■□□□ 1.78
KDM3A-206ENST00000452034 GAPVD1Q14C86 1478 aa26.13■■□□□ 1.77
KDM3A-206ENST00000452034 GRIN2BQ13224 1484 aa26.07■■□□□ 1.76
KDM3A-206ENST00000452034 SNAPC4Q5SXM2 1469 aa26.05■■□□□ 1.76
KDM3A-206ENST00000452034 KIF27Q86VH2 1401 aa26.01■■□□□ 1.75
KDM3A-206ENST00000452034 RUSC2Q8N2Y8 1516 aa25.99■■□□□ 1.75
KDM3A-206ENST00000452034 ERICH3Q5RHP9 1530 aa25.96■■□□□ 1.75
KDM3A-206ENST00000452034 MAGI1Q96QZ7 1491 aaPredicted RBP25.96■■□□□ 1.75
KDM3A-206ENST00000452034 CHD1O14646 1710 aa25.95■■□□□ 1.74
KDM3A-206ENST00000452034 ADAMTS12P58397 1594 aa25.93■■□□□ 1.74
KDM3A-206ENST00000452034 SYNJ2O15056 1496 aa25.87■■□□□ 1.73
KDM3A-206ENST00000452034 IGF1RP08069 1367 aa25.87■■□□□ 1.73
KDM3A-206ENST00000452034 FBLN2P98095 1184 aa25.86■■□□□ 1.73
KDM3A-206ENST00000452034 FHAD1B1AJZ9 1412 aa25.83■■□□□ 1.73
KDM3A-206ENST00000452034 DNAJC5Q9H3Z4 198 aa25.82■■□□□ 1.72
KDM3A-206ENST00000452034 CUL7Q14999 1698 aa25.82■■□□□ 1.72
KDM3A-206ENST00000452034 CHMP7Q8WUX9 453 aaPredicted RBP25.8■■□□□ 1.72
KDM3A-206ENST00000452034 GRIN2AQ12879 1464 aa25.77■■□□□ 1.72
KDM3A-206ENST00000452034 FAM9AQ8IZU1 332 aaPredicted RBP25.75■■□□□ 1.71
KDM3A-206ENST00000452034 CARMIL1Q5VZK9 1371 aa25.73■■□□□ 1.71
KDM3A-206ENST00000452034 OSCARQ8IYS5 282 aa25.72■■□□□ 1.71
KDM3A-206ENST00000452034 EEA1Q15075 1411 aa25.71■■□□□ 1.71
KDM3A-206ENST00000452034 CEP170Q5SW79 1584 aa25.67■■□□□ 1.7
KDM3A-206ENST00000452034 CSRNP3Q8WYN3 585 aa25.65■■□□□ 1.7
KDM3A-206ENST00000452034 CLASP1Q7Z460 1538 aa25.63■■□□□ 1.69
KDM3A-206ENST00000452034 PRXQ9BXM0 1461 aa25.62■■□□□ 1.69
KDM3A-206ENST00000452034 RAPGEF2Q9Y4G8 1499 aa25.62■■□□□ 1.69
KDM3A-206ENST00000452034 NUP160Q12769 1436 aa25.62■■□□□ 1.69
KDM3A-206ENST00000452034 KIF21BO75037 1637 aa25.5■■□□□ 1.67
KDM3A-206ENST00000452034 EHMT2Q96KQ7 1210 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms