RNA–Protein interactions for RNA: ENST00000452022.1

RETREG2-206, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 3

Gene RETREG2, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-206ENST00000452022 NISCHQ9Y2I1 1504 aa23.12■■□□□ 1.29
RETREG2-206ENST00000452022 CCDC180Q9P1Z9 1646 aa20.53■□□□□ 0.88
RETREG2-206ENST00000452022 ABCC9O60706 1549 aa19.97■□□□□ 0.79
RETREG2-206ENST00000452022 DCAF8L2P0C7V8 631 aa19.32■□□□□ 0.68
RETREG2-206ENST00000452022 ZCCHC6Q5VYS8 1495 aaKnown RBP19.3■□□□□ 0.68
RETREG2-206ENST00000452022 RB1CC1Q8TDY2 1594 aa19.26■□□□□ 0.67
RETREG2-206ENST00000452022 NACADO15069 1562 aa19.24■□□□□ 0.67
RETREG2-206ENST00000452022 MYO15BQ96JP2 1530 aa19.13■□□□□ 0.65
RETREG2-206ENST00000452022 DCAF1Q9Y4B6 1507 aa19.11■□□□□ 0.65
RETREG2-206ENST00000452022 UNC13AQ9UPW8 1703 aa18.83■□□□□ 0.6
RETREG2-206ENST00000452022 SCRIBQ14160 1630 aa18.78■□□□□ 0.6
RETREG2-206ENST00000452022 PABPN1Q86U42 306 aaKnown RBP eCLIP18.65■□□□□ 0.58
RETREG2-206ENST00000452022 BICRAQ9NZM4 1560 aa18.63■□□□□ 0.57
RETREG2-206ENST00000452022 SHROOM4Q9ULL8 1493 aa18.46■□□□□ 0.54
RETREG2-206ENST00000452022 EIF4G1Q04637 1599 aaKnown RBP18.16■□□□□ 0.5
RETREG2-206ENST00000452022 DNAJC5BQ9UF47 199 aa18.09■□□□□ 0.49
RETREG2-206ENST00000452022 CC2D2AQ9P2K1 1620 aa18.05■□□□□ 0.48
RETREG2-206ENST00000452022 CECR2Q9BXF3 1484 aa18■□□□□ 0.47
RETREG2-206ENST00000452022 SMARCA4P51532 1647 aa17.94■□□□□ 0.46
RETREG2-206ENST00000452022 BAZ1AQ9NRL2 1556 aaPredicted RBP17.94■□□□□ 0.46
RETREG2-206ENST00000452022 MROH2BQ7Z745 1585 aa17.83■□□□□ 0.44
RETREG2-206ENST00000452022 SMARCA2P51531 1590 aa17.79■□□□□ 0.44
RETREG2-206ENST00000452022 ATAD2BQ9ULI0 1458 aa17.78■□□□□ 0.44
RETREG2-206ENST00000452022 PEG3Q9GZU2 1588 aa17.72■□□□□ 0.43
RETREG2-206ENST00000452022 NCAPD3P42695 1498 aa17.72■□□□□ 0.43
RETREG2-206ENST00000452022 HMGXB3Q12766 1538 aa17.69■□□□□ 0.42
RETREG2-206ENST00000452022 BAZ1BQ9UIG0 1483 aaKnown RBP17.69■□□□□ 0.42
RETREG2-206ENST00000452022 WIZO95785 1651 aa17.67■□□□□ 0.42
RETREG2-206ENST00000452022 RSF1Q96T23 1441 aaPredicted RBP17.65■□□□□ 0.42
RETREG2-206ENST00000452022 TOP2AP11388 1531 aaKnown RBP17.5■□□□□ 0.39
RETREG2-206ENST00000452022 SUPT5HO00267 1087 aaKnown RBP17.38■□□□□ 0.37
RETREG2-206ENST00000452022 NESP48681 1621 aa17.29■□□□□ 0.36
RETREG2-206ENST00000452022 LAMC3Q9Y6N6 1575 aa17.28■□□□□ 0.36
RETREG2-206ENST00000452022 CCDC88BA6NC98 1476 aa17.25■□□□□ 0.35
RETREG2-206ENST00000452022 CADPSQ9ULU8 1353 aa17.23■□□□□ 0.35
RETREG2-206ENST00000452022 ERCC6Q03468 1493 aa17.22■□□□□ 0.35
RETREG2-206ENST00000452022 PDS5BQ9NTI5 1447 aa17.15■□□□□ 0.34
RETREG2-206ENST00000452022 CFTRP13569 1480 aa17.15■□□□□ 0.34
RETREG2-206ENST00000452022 KIF21AQ7Z4S6 1674 aa17.13■□□□□ 0.33
RETREG2-206ENST00000452022 PRDM2Q13029 1718 aa17.12■□□□□ 0.33
RETREG2-206ENST00000452022 FANCD2Q9BXW9 1451 aa17.06■□□□□ 0.32
RETREG2-206ENST00000452022 CEP164Q9UPV0 1460 aa17.05■□□□□ 0.32
RETREG2-206ENST00000452022 THOC2Q8NI27 1593 aaKnown RBP17.02■□□□□ 0.32
RETREG2-206ENST00000452022 MRC2Q9UBG0 1479 aa16.99■□□□□ 0.31
RETREG2-206ENST00000452022 CUX2O14529 1486 aa16.93■□□□□ 0.3
RETREG2-206ENST00000452022 WDR62O43379 1518 aa16.91■□□□□ 0.3
RETREG2-206ENST00000452022 URB2Q14146 1524 aaKnown RBP16.87■□□□□ 0.29
RETREG2-206ENST00000452022 DNMBPQ6XZF7 1577 aa16.81■□□□□ 0.28
RETREG2-206ENST00000452022 TOPBP1Q92547 1522 aa16.8■□□□□ 0.28
RETREG2-206ENST00000452022 ABCC8Q09428 1581 aa16.8■□□□□ 0.28
RETREG2-206ENST00000452022 CUX1P39880 1505 aa16.73■□□□□ 0.27
RETREG2-206ENST00000452022 WRNQ14191 1432 aaPredicted RBP eCLIP16.68■□□□□ 0.26
RETREG2-206ENST00000452022 POLA1P09884 1462 aaPredicted RBP16.67■□□□□ 0.26
RETREG2-206ENST00000452022 FGD5Q6ZNL6 1462 aa16.67■□□□□ 0.26
RETREG2-206ENST00000452022 IFT140Q96RY7 1462 aa16.67■□□□□ 0.26
RETREG2-206ENST00000452022 SYNJ1O43426 1573 aa16.64■□□□□ 0.25
RETREG2-206ENST00000452022 BIVM-ERCC5R4GMW8 1640 aa16.64■□□□□ 0.25
RETREG2-206ENST00000452022 TOP2BQ02880 1626 aa16.63■□□□□ 0.25
RETREG2-206ENST00000452022 TARBP1Q13395 1621 aaKnown RBP16.6■□□□□ 0.25
RETREG2-206ENST00000452022 SOGA1O94964 1423 aa16.6■□□□□ 0.25
RETREG2-206ENST00000452022 RAD54L2Q9Y4B4 1467 aa16.6■□□□□ 0.25
RETREG2-206ENST00000452022 ZNF608Q9ULD9 1512 aaPredicted RBP16.57■□□□□ 0.24
RETREG2-206ENST00000452022 EIF4G3O43432 1585 aaKnown RBP16.55■□□□□ 0.24
RETREG2-206ENST00000452022 WDR97A6NE52 1622 aa16.52■□□□□ 0.24
RETREG2-206ENST00000452022 AQRO60306 1485 aaKnown RBP eCLIP16.49■□□□□ 0.239e-7■■■■■ 32.2
RETREG2-206ENST00000452022 ABCA10Q8WWZ4 1543 aa16.49■□□□□ 0.23
RETREG2-206ENST00000452022 TDRD9Q8NDG6 1382 aaKnown RBP16.49■□□□□ 0.23
RETREG2-206ENST00000452022 ABCA5Q8WWZ7 1642 aa16.43■□□□□ 0.22
RETREG2-206ENST00000452022 PBRM1Q86U86 1689 aa16.43■□□□□ 0.22
RETREG2-206ENST00000452022 GAPVD1Q14C86 1478 aa16.42■□□□□ 0.22
RETREG2-206ENST00000452022 TRIM41Q8WV44 630 aa16.4■□□□□ 0.22
RETREG2-206ENST00000452022 GRIN2BQ13224 1484 aa16.4■□□□□ 0.22
RETREG2-206ENST00000452022 SNAPC4Q5SXM2 1469 aa16.37■□□□□ 0.21
RETREG2-206ENST00000452022 DNAJC5Q9H3Z4 198 aa16.35■□□□□ 0.21
RETREG2-206ENST00000452022 MAGI1Q96QZ7 1491 aaPredicted RBP16.34■□□□□ 0.21
RETREG2-206ENST00000452022 KIF27Q86VH2 1401 aa16.33■□□□□ 0.2
RETREG2-206ENST00000452022 CHD1O14646 1710 aa16.33■□□□□ 0.2
RETREG2-206ENST00000452022 FBLN2P98095 1184 aa16.31■□□□□ 0.2
RETREG2-206ENST00000452022 ERICH3Q5RHP9 1530 aa16.3■□□□□ 0.2
RETREG2-206ENST00000452022 ADAMTS12P58397 1594 aa16.29■□□□□ 0.2
RETREG2-206ENST00000452022 SYNJ2O15056 1496 aa16.27■□□□□ 0.19
RETREG2-206ENST00000452022 CHMP7Q8WUX9 453 aaPredicted RBP16.26■□□□□ 0.19
RETREG2-206ENST00000452022 CHIC1Q5VXU3 224 aa16.25■□□□□ 0.19
RETREG2-206ENST00000452022 OSCARQ8IYS5 282 aa16.23■□□□□ 0.19
RETREG2-206ENST00000452022 FHAD1B1AJZ9 1412 aa16.22■□□□□ 0.19
RETREG2-206ENST00000452022 CUL7Q14999 1698 aa16.22■□□□□ 0.19
RETREG2-206ENST00000452022 RUSC2Q8N2Y8 1516 aa16.2■□□□□ 0.18
RETREG2-206ENST00000452022 GRIN2AQ12879 1464 aa16.19■□□□□ 0.18
RETREG2-206ENST00000452022 IGF1RP08069 1367 aa16.18■□□□□ 0.18
RETREG2-206ENST00000452022 CARMIL1Q5VZK9 1371 aa16.13■□□□□ 0.17
RETREG2-206ENST00000452022 CEP170Q5SW79 1584 aa16.11■□□□□ 0.17
RETREG2-206ENST00000452022 EEA1Q15075 1411 aa16.11■□□□□ 0.17
RETREG2-206ENST00000452022 CLASP1Q7Z460 1538 aa16.1■□□□□ 0.17
RETREG2-206ENST00000452022 FAM9AQ8IZU1 332 aaPredicted RBP16.08■□□□□ 0.16
RETREG2-206ENST00000452022 NUP160Q12769 1436 aa16.08■□□□□ 0.16
RETREG2-206ENST00000452022 RAPGEF2Q9Y4G8 1499 aa16.07■□□□□ 0.16
RETREG2-206ENST00000452022 CSRNP3Q8WYN3 585 aa16.04■□□□□ 0.16
RETREG2-206ENST00000452022 ARHGEF11O15085 1522 aa16.01■□□□□ 0.15
RETREG2-206ENST00000452022 PRXQ9BXM0 1461 aa16.01■□□□□ 0.15
RETREG2-206ENST00000452022 RIMBP3CA6NJZ7 1639 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms