RNA–Protein interactions for RNA: ENST00000451348.1

LINC01839-201, Transcript of long intergenic non-protein coding RNA 1839, humanhuman

TSL 3 BASIC

Gene LINC01839, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01839-201ENST00000451348 NISCHQ9Y2I1 1504 aa17.55■□□□□ 0.4
LINC01839-201ENST00000451348 DNAJC5BQ9UF47 199 aa17.5■□□□□ 0.39
LINC01839-201ENST00000451348 ABCC9O60706 1549 aa17.43■□□□□ 0.38
LINC01839-201ENST00000451348 DNAJC5Q9H3Z4 198 aa17.04■□□□□ 0.32
LINC01839-201ENST00000451348 CCDC180Q9P1Z9 1646 aa16.3■□□□□ 0.2
LINC01839-201ENST00000451348 RB1CC1Q8TDY2 1594 aa16.1■□□□□ 0.17
LINC01839-201ENST00000451348 PABPN1Q86U42 306 aaKnown RBP eCLIP15.99■□□□□ 0.15
LINC01839-201ENST00000451348 CECR2Q9BXF3 1484 aa15.89■□□□□ 0.13
LINC01839-201ENST00000451348 NACADO15069 1562 aa15.72■□□□□ 0.11
LINC01839-201ENST00000451348 CC2D2AQ9P2K1 1620 aa15.71■□□□□ 0.11
LINC01839-201ENST00000451348 BICRAQ9NZM4 1560 aa15.7■□□□□ 0.1
LINC01839-201ENST00000451348 UNC13AQ9UPW8 1703 aa15.65■□□□□ 0.1
LINC01839-201ENST00000451348 CUX2O14529 1486 aa15.65■□□□□ 0.1
LINC01839-201ENST00000451348 TRIM41Q8WV44 630 aa15.62■□□□□ 0.09
LINC01839-201ENST00000451348 SHROOM4Q9ULL8 1493 aa15.46■□□□□ 0.07
LINC01839-201ENST00000451348 EIF4G1Q04637 1599 aaKnown RBP15.41■□□□□ 0.06
LINC01839-201ENST00000451348 MYO15BQ96JP2 1530 aa15.18■□□□□ 0.02
LINC01839-201ENST00000451348 DCAF8L2P0C7V8 631 aa15.15■□□□□ 0.02
LINC01839-201ENST00000451348 ERCC6Q03468 1493 aa15.14■□□□□ 0.01
LINC01839-201ENST00000451348 AEBP2Q6ZN18 517 aaPredicted RBP15.05■□□□□ -0
LINC01839-201ENST00000451348 THOC2Q8NI27 1593 aaKnown RBP14.78□□□□□ -0.04
LINC01839-201ENST00000451348 SCRIBQ14160 1630 aa14.76□□□□□ -0.05
LINC01839-201ENST00000451348 ILDR1Q86SU0 546 aaPredicted RBP14.73□□□□□ -0.05
LINC01839-201ENST00000451348 OSCARQ8IYS5 282 aa14.65□□□□□ -0.06
LINC01839-201ENST00000451348 NESP48681 1621 aa14.63□□□□□ -0.07
LINC01839-201ENST00000451348 BAZ1AQ9NRL2 1556 aaPredicted RBP14.61□□□□□ -0.07
LINC01839-201ENST00000451348 RIMBP3CA6NJZ7 1639 aa14.59□□□□□ -0.07
LINC01839-201ENST00000451348 RIMBP3BA6NNM3 1639 aa14.59□□□□□ -0.07
LINC01839-201ENST00000451348 RIMBP3Q9UFD9 1639 aa14.59□□□□□ -0.07
LINC01839-201ENST00000451348 NCAPD3P42695 1498 aa14.56□□□□□ -0.08
LINC01839-201ENST00000451348 TRHP20396 242 aaPredicted RBP14.54□□□□□ -0.08
LINC01839-201ENST00000451348 DCAF1Q9Y4B6 1507 aa14.5□□□□□ -0.09
LINC01839-201ENST00000451348 SMARCA2P51531 1590 aa14.49□□□□□ -0.09
LINC01839-201ENST00000451348 ARHGEF11O15085 1522 aa14.45□□□□□ -0.1
LINC01839-201ENST00000451348 LAMC3Q9Y6N6 1575 aa14.39□□□□□ -0.11
LINC01839-201ENST00000451348 KIF21AQ7Z4S6 1674 aa14.36□□□□□ -0.11
LINC01839-201ENST00000451348 PDS5BQ9NTI5 1447 aa14.34□□□□□ -0.11
LINC01839-201ENST00000451348 CYB5RLQ6IPT4 315 aa14.34□□□□□ -0.11
LINC01839-201ENST00000451348 WDR62O43379 1518 aa14.32□□□□□ -0.12
LINC01839-201ENST00000451348 HMGXB3Q12766 1538 aa14.32□□□□□ -0.12
LINC01839-201ENST00000451348 ZCCHC6Q5VYS8 1495 aaKnown RBP14.3□□□□□ -0.12
LINC01839-201ENST00000451348 MRC2Q9UBG0 1479 aa14.29□□□□□ -0.12
LINC01839-201ENST00000451348 ATAD2BQ9ULI0 1458 aa14.29□□□□□ -0.12
LINC01839-201ENST00000451348 ARAP1Q96P48 1450 aa14.22□□□□□ -0.13
LINC01839-201ENST00000451348 BAZ1BQ9UIG0 1483 aaKnown RBP14.06□□□□□ -0.16
LINC01839-201ENST00000451348 RSF1Q96T23 1441 aaPredicted RBP14.02□□□□□ -0.16
LINC01839-201ENST00000451348 CADPSQ9ULU8 1353 aa14.01□□□□□ -0.17
LINC01839-201ENST00000451348 CEP164Q9UPV0 1460 aa13.96□□□□□ -0.17
LINC01839-201ENST00000451348 SMARCA4P51532 1647 aa13.93□□□□□ -0.18
LINC01839-201ENST00000451348 FBXO41Q8TF61 875 aa13.92□□□□□ -0.18
LINC01839-201ENST00000451348 LMTK3Q96Q04 1460 aa13.92□□□□□ -0.18
LINC01839-201ENST00000451348 KDM4FA0A1W2PPD8 638 aa13.91□□□□□ -0.18
LINC01839-201ENST00000451348 SOCS7O14512 581 aa13.9□□□□□ -0.18
LINC01839-201ENST00000451348 PEG3Q9GZU2 1588 aa13.89□□□□□ -0.19
LINC01839-201ENST00000451348 ERCC6L2Q5T890 1561 aa13.88□□□□□ -0.19
LINC01839-201ENST00000451348 FANCD2Q9BXW9 1451 aa13.83□□□□□ -0.2
LINC01839-201ENST00000451348 ZNF608Q9ULD9 1512 aaPredicted RBP13.82□□□□□ -0.2
LINC01839-201ENST00000451348 URB2Q14146 1524 aaKnown RBP13.8□□□□□ -0.2
LINC01839-201ENST00000451348 CHD1O14646 1710 aa13.76□□□□□ -0.21
LINC01839-201ENST00000451348 IFT140Q96RY7 1462 aa13.75□□□□□ -0.21
LINC01839-201ENST00000451348 HECW2Q9P2P5 1572 aa13.71□□□□□ -0.21
LINC01839-201ENST00000451348 ILDR2Q71H61 639 aa13.71□□□□□ -0.21
LINC01839-201ENST00000451348 EIF4G3O43432 1585 aaKnown RBP13.68□□□□□ -0.22
LINC01839-201ENST00000451348 CLASP1Q7Z460 1538 aa13.68□□□□□ -0.22
LINC01839-201ENST00000451348 CFTRP13569 1480 aa13.61□□□□□ -0.23
LINC01839-201ENST00000451348 GAPVD1Q14C86 1478 aa13.61□□□□□ -0.23
LINC01839-201ENST00000451348 FBLN2P98095 1184 aa13.59□□□□□ -0.23
LINC01839-201ENST00000451348 KIF13AQ9H1H9 1805 aa13.57□□□□□ -0.24
LINC01839-201ENST00000451348 SYNJ2O15056 1496 aa13.55□□□□□ -0.24
LINC01839-201ENST00000451348 DISP3Q9P2K9 1392 aa13.54□□□□□ -0.24
LINC01839-201ENST00000451348 AQRO60306 1485 aaKnown RBP eCLIP13.52□□□□□ -0.25
LINC01839-201ENST00000451348 SYNJ1O43426 1573 aa13.51□□□□□ -0.25
LINC01839-201ENST00000451348 ADGRL1O94910 1474 aa13.5□□□□□ -0.25
LINC01839-201ENST00000451348 KDM6BO15054 1643 aa13.48□□□□□ -0.25
LINC01839-201ENST00000451348 MROH2BQ7Z745 1585 aa13.47□□□□□ -0.25
LINC01839-201ENST00000451348 TOPBP1Q92547 1522 aa13.44□□□□□ -0.26
LINC01839-201ENST00000451348 TARBP1Q13395 1621 aaKnown RBP13.42□□□□□ -0.26
LINC01839-201ENST00000451348 ABCC10Q5T3U5 1492 aa13.4□□□□□ -0.26
LINC01839-201ENST00000451348 FAM69CQ0P6D2 419 aa13.36□□□□□ -0.27
LINC01839-201ENST00000451348 ABCC8Q09428 1581 aa13.36□□□□□ -0.27
LINC01839-201ENST00000451348 SNAPC4Q5SXM2 1469 aa13.36□□□□□ -0.27
LINC01839-201ENST00000451348 CHMP7Q8WUX9 453 aaPredicted RBP13.35□□□□□ -0.27
LINC01839-201ENST00000451348 MAGI1Q96QZ7 1491 aaPredicted RBP13.32□□□□□ -0.28
LINC01839-201ENST00000451348 SPATA31D1Q6ZQQ2 1576 aa13.32□□□□□ -0.28
LINC01839-201ENST00000451348 DIP2BQ9P265 1576 aa13.3□□□□□ -0.28
LINC01839-201ENST00000451348 DNMBPQ6XZF7 1577 aa13.28□□□□□ -0.28
LINC01839-201ENST00000451348 PRDM2Q13029 1718 aa13.27□□□□□ -0.28
LINC01839-201ENST00000451348 MAPKBP1O60336 1514 aa13.25□□□□□ -0.29
LINC01839-201ENST00000451348 WDR97A6NE52 1622 aa13.24□□□□□ -0.29
LINC01839-201ENST00000451348 TDRD9Q8NDG6 1382 aaKnown RBP13.23□□□□□ -0.29
LINC01839-201ENST00000451348 POLA1P09884 1462 aaPredicted RBP13.22□□□□□ -0.29
LINC01839-201ENST00000451348 WIZO95785 1651 aa13.19□□□□□ -0.3
LINC01839-201ENST00000451348 CEP170Q5SW79 1584 aa13.18□□□□□ -0.3
LINC01839-201ENST00000451348 GRIN2BQ13224 1484 aa13.17□□□□□ -0.3
LINC01839-201ENST00000451348 TOP2BQ02880 1626 aa13.16□□□□□ -0.3
LINC01839-201ENST00000451348 RAD54L2Q9Y4B4 1467 aa13.15□□□□□ -0.3
LINC01839-201ENST00000451348 CERKQ8TCT0 537 aa13.13□□□□□ -0.31
LINC01839-201ENST00000451348 TSPOAP1O95153 1857 aa13.12□□□□□ -0.31
LINC01839-201ENST00000451348 SHROOM2Q13796 1616 aa13.11□□□□□ -0.31
LINC01839-201ENST00000451348 SOGA1O94964 1423 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms