RNA–Protein interactions for RNA: ENST00000449924.6

RBFOX2-210, Transcript of RNA binding fox-1 homolog 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBFOX2, Length 1,935 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-210ENST00000449924 NISCHQ9Y2I1 1504 aa26.24■■□□□ 1.79
RBFOX2-210ENST00000449924 CCDC180Q9P1Z9 1646 aa22.94■■□□□ 1.26
RBFOX2-210ENST00000449924 ZCCHC6Q5VYS8 1495 aaKnown RBP21.98■■□□□ 1.11
RBFOX2-210ENST00000449924 ABCC9O60706 1549 aa21.97■■□□□ 1.11
RBFOX2-210ENST00000449924 DCAF8L2P0C7V8 631 aa21.82■■□□□ 1.08
RBFOX2-210ENST00000449924 DCAF1Q9Y4B6 1507 aa21.64■■□□□ 1.05
RBFOX2-210ENST00000449924 MYO15BQ96JP2 1530 aa21.45■■□□□ 1.02
RBFOX2-210ENST00000449924 NACADO15069 1562 aa21.42■■□□□ 1.02
RBFOX2-210ENST00000449924 SHROOM4Q9ULL8 1493 aa21.32■■□□□ 1
RBFOX2-210ENST00000449924 RB1CC1Q8TDY2 1594 aa21.29■■□□□ 1
RBFOX2-210ENST00000449924 SCRIBQ14160 1630 aa21.13■□□□□ 0.97
RBFOX2-210ENST00000449924 UNC13AQ9UPW8 1703 aa20.98■□□□□ 0.95
RBFOX2-210ENST00000449924 BICRAQ9NZM4 1560 aa20.73■□□□□ 0.91
RBFOX2-210ENST00000449924 PABPN1Q86U42 306 aaKnown RBP eCLIP20.72■□□□□ 0.91
RBFOX2-210ENST00000449924 AEBP2Q6ZN18 517 aaPredicted RBP20.7■□□□□ 0.91
RBFOX2-210ENST00000449924 CECR2Q9BXF3 1484 aa20.47■□□□□ 0.87
RBFOX2-210ENST00000449924 SUPT5HO00267 1087 aaKnown RBP20.4■□□□□ 0.86
RBFOX2-210ENST00000449924 MROH2BQ7Z745 1585 aa20.31■□□□□ 0.84
RBFOX2-210ENST00000449924 RSF1Q96T23 1441 aaPredicted RBP20.29■□□□□ 0.84
RBFOX2-210ENST00000449924 BAZ1AQ9NRL2 1556 aaPredicted RBP20.25■□□□□ 0.83
RBFOX2-210ENST00000449924 SMARCA4P51532 1647 aa20.22■□□□□ 0.83
RBFOX2-210ENST00000449924 WIZO95785 1651 aa20.15■□□□□ 0.82
RBFOX2-210ENST00000449924 EIF4G1Q04637 1599 aaKnown RBP20.09■□□□□ 0.81
RBFOX2-210ENST00000449924 PEG3Q9GZU2 1588 aa19.95■□□□□ 0.78
RBFOX2-210ENST00000449924 ATAD2BQ9ULI0 1458 aa19.95■□□□□ 0.78
RBFOX2-210ENST00000449924 SMARCA2P51531 1590 aa19.88■□□□□ 0.77
RBFOX2-210ENST00000449924 CC2D2AQ9P2K1 1620 aa19.87■□□□□ 0.77
RBFOX2-210ENST00000449924 TOP2AP11388 1531 aaKnown RBP19.85■□□□□ 0.77
RBFOX2-210ENST00000449924 NCAPD3P42695 1498 aa19.79■□□□□ 0.76
RBFOX2-210ENST00000449924 BAZ1BQ9UIG0 1483 aaKnown RBP19.79■□□□□ 0.76
RBFOX2-210ENST00000449924 HMGXB3Q12766 1538 aa19.71■□□□□ 0.75
RBFOX2-210ENST00000449924 CCDC88BA6NC98 1476 aa19.7■□□□□ 0.74
RBFOX2-210ENST00000449924 DNAJC5BQ9UF47 199 aa19.67■□□□□ 0.74
RBFOX2-210ENST00000449924 CHIC1Q5VXU3 224 aa19.57■□□□□ 0.72
RBFOX2-210ENST00000449924 CFTRP13569 1480 aa19.29■□□□□ 0.68
RBFOX2-210ENST00000449924 CADPSQ9ULU8 1353 aa19.28■□□□□ 0.68
RBFOX2-210ENST00000449924 NESP48681 1621 aa19.25■□□□□ 0.67
RBFOX2-210ENST00000449924 ABCC8Q09428 1581 aa19.24■□□□□ 0.67
RBFOX2-210ENST00000449924 PRDM2Q13029 1718 aa19.21■□□□□ 0.66
RBFOX2-210ENST00000449924 TRIM41Q8WV44 630 aa19.15■□□□□ 0.66
RBFOX2-210ENST00000449924 LAMC3Q9Y6N6 1575 aa19.14■□□□□ 0.65
RBFOX2-210ENST00000449924 WRNQ14191 1432 aaPredicted RBP eCLIP19.07■□□□□ 0.64
RBFOX2-210ENST00000449924 FANCD2Q9BXW9 1451 aa19.06■□□□□ 0.64
RBFOX2-210ENST00000449924 SYNJ1O43426 1573 aa19.05■□□□□ 0.64
RBFOX2-210ENST00000449924 KIF21AQ7Z4S6 1674 aa19.01■□□□□ 0.63
RBFOX2-210ENST00000449924 PDS5BQ9NTI5 1447 aa18.99■□□□□ 0.63
RBFOX2-210ENST00000449924 CUX1P39880 1505 aa18.98■□□□□ 0.63
RBFOX2-210ENST00000449924 TOP2BQ02880 1626 aa18.95■□□□□ 0.62
RBFOX2-210ENST00000449924 BIVM-ERCC5R4GMW8 1640 aa18.94■□□□□ 0.62
RBFOX2-210ENST00000449924 CEP164Q9UPV0 1460 aa18.94■□□□□ 0.62
RBFOX2-210ENST00000449924 URB2Q14146 1524 aaKnown RBP18.87■□□□□ 0.61
RBFOX2-210ENST00000449924 FAM9AQ8IZU1 332 aaPredicted RBP18.86■□□□□ 0.61
RBFOX2-210ENST00000449924 TOPBP1Q92547 1522 aa18.84■□□□□ 0.61
RBFOX2-210ENST00000449924 DNMBPQ6XZF7 1577 aa18.84■□□□□ 0.61
RBFOX2-210ENST00000449924 SOGA1O94964 1423 aa18.83■□□□□ 0.6
RBFOX2-210ENST00000449924 RUSC2Q8N2Y8 1516 aa18.81■□□□□ 0.6
RBFOX2-210ENST00000449924 ERCC6Q03468 1493 aa18.8■□□□□ 0.6
RBFOX2-210ENST00000449924 FGD5Q6ZNL6 1462 aa18.8■□□□□ 0.6
RBFOX2-210ENST00000449924 MRC2Q9UBG0 1479 aa18.77■□□□□ 0.59
RBFOX2-210ENST00000449924 POLA1P09884 1462 aaPredicted RBP18.73■□□□□ 0.59
RBFOX2-210ENST00000449924 POTEDQ86YR6 584 aa18.73■□□□□ 0.59
RBFOX2-210ENST00000449924 LOC105371045A0A1W2PR82 267 aa18.72■□□□□ 0.59
RBFOX2-210ENST00000449924 RAD54L2Q9Y4B4 1467 aa18.72■□□□□ 0.59
RBFOX2-210ENST00000449924 THOC2Q8NI27 1593 aaKnown RBP18.71■□□□□ 0.59
RBFOX2-210ENST00000449924 WDR62O43379 1518 aa18.68■□□□□ 0.58
RBFOX2-210ENST00000449924 CSRNP3Q8WYN3 585 aa18.64■□□□□ 0.57
RBFOX2-210ENST00000449924 EHMT2Q96KQ7 1210 aa18.64■□□□□ 0.57
RBFOX2-210ENST00000449924 EEA1Q15075 1411 aa18.62■□□□□ 0.57
RBFOX2-210ENST00000449924 CUX2O14529 1486 aa18.62■□□□□ 0.57
RBFOX2-210ENST00000449924 ABCA10Q8WWZ4 1543 aa18.6■□□□□ 0.57
RBFOX2-210ENST00000449924 TARBP1Q13395 1621 aaKnown RBP18.59■□□□□ 0.57
RBFOX2-210ENST00000449924 KIF27Q86VH2 1401 aa18.59■□□□□ 0.57
RBFOX2-210ENST00000449924 WDR97A6NE52 1622 aa18.59■□□□□ 0.57
RBFOX2-210ENST00000449924 TDRD9Q8NDG6 1382 aaKnown RBP18.54■□□□□ 0.56
RBFOX2-210ENST00000449924 IGF1RP08069 1367 aa18.51■□□□□ 0.55
RBFOX2-210ENST00000449924 IFT140Q96RY7 1462 aa18.5■□□□□ 0.55
RBFOX2-210ENST00000449924 ABCA5Q8WWZ7 1642 aa18.48■□□□□ 0.55
RBFOX2-210ENST00000449924 ZNF608Q9ULD9 1512 aaPredicted RBP18.48■□□□□ 0.55
RBFOX2-210ENST00000449924 AQRO60306 1485 aaKnown RBP eCLIP18.48■□□□□ 0.55
RBFOX2-210ENST00000449924 GAPVD1Q14C86 1478 aa18.45■□□□□ 0.54
RBFOX2-210ENST00000449924 KIF21BO75037 1637 aa18.44■□□□□ 0.54
RBFOX2-210ENST00000449924 PRXQ9BXM0 1461 aa18.44■□□□□ 0.54
RBFOX2-210ENST00000449924 RAPGEF2Q9Y4G8 1499 aa18.43■□□□□ 0.54
RBFOX2-210ENST00000449924 CARMIL1Q5VZK9 1371 aa18.39■□□□□ 0.54
RBFOX2-210ENST00000449924 PBRM1Q86U86 1689 aa18.39■□□□□ 0.53
RBFOX2-210ENST00000449924 GOLGA3Q08378 1498 aa18.39■□□□□ 0.53
RBFOX2-210ENST00000449924 UBTFP17480 764 aaKnown RBP18.38■□□□□ 0.53
RBFOX2-210ENST00000449924 EIF4G3O43432 1585 aaKnown RBP18.37■□□□□ 0.53
RBFOX2-210ENST00000449924 ERICH3Q5RHP9 1530 aa18.36■□□□□ 0.53
RBFOX2-210ENST00000449924 CUL7Q14999 1698 aa18.33■□□□□ 0.52
RBFOX2-210ENST00000449924 GRIN2BQ13224 1484 aa18.32■□□□□ 0.52
RBFOX2-210ENST00000449924 TNIKQ9UKE5 1360 aa18.32■□□□□ 0.52
RBFOX2-210ENST00000449924 SNAPC4Q5SXM2 1469 aa18.25■□□□□ 0.51
RBFOX2-210ENST00000449924 ADAMTS12P58397 1594 aa18.24■□□□□ 0.51
RBFOX2-210ENST00000449924 FHAD1B1AJZ9 1412 aa18.23■□□□□ 0.51
RBFOX2-210ENST00000449924 RANGAP1P46060 587 aaPredicted RBP18.21■□□□□ 0.51
RBFOX2-210ENST00000449924 CEP162Q5TB80 1403 aa18.21■□□□□ 0.5
RBFOX2-210ENST00000449924 MAGI1Q96QZ7 1491 aaPredicted RBP18.17■□□□□ 0.5
RBFOX2-210ENST00000449924 CTTNBP2Q8WZ74 1663 aa18.13■□□□□ 0.49
RBFOX2-210ENST00000449924 FBLN2P98095 1184 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms