RNA–Protein interactions for RNA: ENST00000448511.5

CHEK2-219, Transcript of checkpoint kinase 2, humanhuman

TSL 2

Gene CHEK2, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-219ENST00000448511 NISCHQ9Y2I1 1504 aa24.72■■□□□ 1.55
CHEK2-219ENST00000448511 AEBP2Q6ZN18 517 aaPredicted RBP24.3■■□□□ 1.48
CHEK2-219ENST00000448511 CHIC1Q5VXU3 224 aa22.7■■□□□ 1.22
CHEK2-219ENST00000448511 CCDC180Q9P1Z9 1646 aa21.73■■□□□ 1.07
CHEK2-219ENST00000448511 ABCC9O60706 1549 aa21.12■□□□□ 0.97
CHEK2-219ENST00000448511 SENP3Q9H4L4 574 aaPredicted RBP20.78■□□□□ 0.92
CHEK2-219ENST00000448511 ZCCHC6Q5VYS8 1495 aaKnown RBP20.65■□□□□ 0.9
CHEK2-219ENST00000448511 DCAF8L2P0C7V8 631 aa20.64■□□□□ 0.9
CHEK2-219ENST00000448511 PHF23Q9BUL5 403 aaPredicted RBP20.46■□□□□ 0.87
CHEK2-219ENST00000448511 DCAF1Q9Y4B6 1507 aa20.42■□□□□ 0.86
CHEK2-219ENST00000448511 NACADO15069 1562 aa20.41■□□□□ 0.86
CHEK2-219ENST00000448511 MYO15BQ96JP2 1530 aa20.38■□□□□ 0.85
CHEK2-219ENST00000448511 RB1CC1Q8TDY2 1594 aa20.35■□□□□ 0.85
CHEK2-219ENST00000448511 SCRIBQ14160 1630 aa19.95■□□□□ 0.78
CHEK2-219ENST00000448511 UNC13AQ9UPW8 1703 aa19.86■□□□□ 0.77
CHEK2-219ENST00000448511 PABPN1Q86U42 306 aaKnown RBP eCLIP19.86■□□□□ 0.77
CHEK2-219ENST00000448511 SHROOM4Q9ULL8 1493 aa19.82■□□□□ 0.76
CHEK2-219ENST00000448511 BICRAQ9NZM4 1560 aa19.78■□□□□ 0.76
CHEK2-219ENST00000448511 FOXD1Q16676 465 aa19.43■□□□□ 0.7
CHEK2-219ENST00000448511 CECR2Q9BXF3 1484 aa19.28■□□□□ 0.68
CHEK2-219ENST00000448511 EIF4G1Q04637 1599 aaKnown RBP19.21■□□□□ 0.67
CHEK2-219ENST00000448511 DNAJC5BQ9UF47 199 aa19.19■□□□□ 0.66
CHEK2-219ENST00000448511 BAZ1AQ9NRL2 1556 aaPredicted RBP19.1■□□□□ 0.65
CHEK2-219ENST00000448511 MROH2BQ7Z745 1585 aa19.09■□□□□ 0.65
CHEK2-219ENST00000448511 SMARCA4P51532 1647 aa19.08■□□□□ 0.65
CHEK2-219ENST00000448511 CC2D2AQ9P2K1 1620 aa19.06■□□□□ 0.64
CHEK2-219ENST00000448511 RSF1Q96T23 1441 aaPredicted RBP19■□□□□ 0.63
CHEK2-219ENST00000448511 ATAD2BQ9ULI0 1458 aa18.95■□□□□ 0.62
CHEK2-219ENST00000448511 SMARCA2P51531 1590 aa18.88■□□□□ 0.61
CHEK2-219ENST00000448511 NCAPD3P42695 1498 aa18.88■□□□□ 0.61
CHEK2-219ENST00000448511 PEG3Q9GZU2 1588 aa18.88■□□□□ 0.61
CHEK2-219ENST00000448511 WIZO95785 1651 aa18.86■□□□□ 0.61
CHEK2-219ENST00000448511 SUPT5HO00267 1087 aaKnown RBP18.82■□□□□ 0.6
CHEK2-219ENST00000448511 BAZ1BQ9UIG0 1483 aaKnown RBP18.79■□□□□ 0.6
CHEK2-219ENST00000448511 HMGXB3Q12766 1538 aa18.76■□□□□ 0.59
CHEK2-219ENST00000448511 TOP2AP11388 1531 aaKnown RBP18.66■□□□□ 0.58
CHEK2-219ENST00000448511 POTEDQ86YR6 584 aa18.55■□□□□ 0.56
CHEK2-219ENST00000448511 CCDC88BA6NC98 1476 aa18.5■□□□□ 0.55
CHEK2-219ENST00000448511 NESP48681 1621 aa18.38■□□□□ 0.53
CHEK2-219ENST00000448511 CADPSQ9ULU8 1353 aa18.37■□□□□ 0.53
CHEK2-219ENST00000448511 MSH5O43196 834 aa18.32■□□□□ 0.52
CHEK2-219ENST00000448511 CFTRP13569 1480 aa18.31■□□□□ 0.52
CHEK2-219ENST00000448511 LAMC3Q9Y6N6 1575 aa18.27■□□□□ 0.52
CHEK2-219ENST00000448511 PDS5BQ9NTI5 1447 aa18.19■□□□□ 0.5
CHEK2-219ENST00000448511 ERCC6Q03468 1493 aa18.14■□□□□ 0.49
CHEK2-219ENST00000448511 FANCD2Q9BXW9 1451 aa18.14■□□□□ 0.49
CHEK2-219ENST00000448511 KIF21AQ7Z4S6 1674 aa18.07■□□□□ 0.48
CHEK2-219ENST00000448511 PIAS4Q8N2W9 510 aaPredicted RBP18.07■□□□□ 0.48
CHEK2-219ENST00000448511 CEP164Q9UPV0 1460 aa18.06■□□□□ 0.48
CHEK2-219ENST00000448511 PRDM2Q13029 1718 aa18.04■□□□□ 0.48
CHEK2-219ENST00000448511 MRC2Q9UBG0 1479 aa17.98■□□□□ 0.47
CHEK2-219ENST00000448511 URB2Q14146 1524 aaKnown RBP17.95■□□□□ 0.46
CHEK2-219ENST00000448511 PLPPR3Q6T4P5 718 aa17.95■□□□□ 0.46
CHEK2-219ENST00000448511 THOC2Q8NI27 1593 aaKnown RBP17.94■□□□□ 0.46
CHEK2-219ENST00000448511 ABCC8Q09428 1581 aa17.92■□□□□ 0.46
CHEK2-219ENST00000448511 WDR62O43379 1518 aa17.89■□□□□ 0.46
CHEK2-219ENST00000448511 TOPBP1Q92547 1522 aa17.88■□□□□ 0.45
CHEK2-219ENST00000448511 WRNQ14191 1432 aaPredicted RBP eCLIP17.88■□□□□ 0.45
CHEK2-219ENST00000448511 CUX1P39880 1505 aa17.87■□□□□ 0.45
CHEK2-219ENST00000448511 PPP6R1Q9UPN7 881 aa17.87■□□□□ 0.45
CHEK2-219ENST00000448511 DNMBPQ6XZF7 1577 aa17.85■□□□□ 0.45
CHEK2-219ENST00000448511 SYNJ1O43426 1573 aa17.81■□□□□ 0.44
CHEK2-219ENST00000448511 ADRA2BP18089 450 aa17.8■□□□□ 0.44
CHEK2-219ENST00000448511 CUX2O14529 1486 aa17.79■□□□□ 0.44
CHEK2-219ENST00000448511 TOP2BQ02880 1626 aa17.76■□□□□ 0.43
CHEK2-219ENST00000448511 POLA1P09884 1462 aaPredicted RBP17.76■□□□□ 0.43
CHEK2-219ENST00000448511 FGD5Q6ZNL6 1462 aa17.76■□□□□ 0.43
CHEK2-219ENST00000448511 BIVM-ERCC5R4GMW8 1640 aa17.72■□□□□ 0.43
CHEK2-219ENST00000448511 RAD54L2Q9Y4B4 1467 aa17.72■□□□□ 0.43
CHEK2-219ENST00000448511 TRIM41Q8WV44 630 aa17.72■□□□□ 0.43
CHEK2-219ENST00000448511 SOGA1O94964 1423 aa17.71■□□□□ 0.43
CHEK2-219ENST00000448511 IFT140Q96RY7 1462 aa17.68■□□□□ 0.42
CHEK2-219ENST00000448511 TARBP1Q13395 1621 aaKnown RBP17.64■□□□□ 0.41
CHEK2-219ENST00000448511 ZNF608Q9ULD9 1512 aaPredicted RBP17.63■□□□□ 0.41
CHEK2-219ENST00000448511 TDRD9Q8NDG6 1382 aaKnown RBP17.61■□□□□ 0.41
CHEK2-219ENST00000448511 ABCA10Q8WWZ4 1543 aa17.59■□□□□ 0.41
CHEK2-219ENST00000448511 AQRO60306 1485 aaKnown RBP eCLIP17.58■□□□□ 0.411e-20■■■■■ 27.5
CHEK2-219ENST00000448511 WDR97A6NE52 1622 aa17.51■□□□□ 0.39
CHEK2-219ENST00000448511 EIF4G3O43432 1585 aaKnown RBP17.5■□□□□ 0.39
CHEK2-219ENST00000448511 GAPVD1Q14C86 1478 aa17.49■□□□□ 0.39
CHEK2-219ENST00000448511 RUSC2Q8N2Y8 1516 aa17.48■□□□□ 0.39
CHEK2-219ENST00000448511 KIF27Q86VH2 1401 aa17.47■□□□□ 0.39
CHEK2-219ENST00000448511 ABCA5Q8WWZ7 1642 aa17.46■□□□□ 0.38
CHEK2-219ENST00000448511 GRIN2BQ13224 1484 aa17.43■□□□□ 0.38
CHEK2-219ENST00000448511 IGF1RP08069 1367 aa17.41■□□□□ 0.38
CHEK2-219ENST00000448511 FAM9AQ8IZU1 332 aaPredicted RBP17.4■□□□□ 0.38
CHEK2-219ENST00000448511 SNAPC4Q5SXM2 1469 aa17.38■□□□□ 0.37
CHEK2-219ENST00000448511 ERICH3Q5RHP9 1530 aa17.36■□□□□ 0.37
CHEK2-219ENST00000448511 PBRM1Q86U86 1689 aa17.35■□□□□ 0.37
CHEK2-219ENST00000448511 FBLN2P98095 1184 aa17.33■□□□□ 0.37
CHEK2-219ENST00000448511 MAGI1Q96QZ7 1491 aaPredicted RBP17.33■□□□□ 0.36
CHEK2-219ENST00000448511 CSRNP3Q8WYN3 585 aa17.32■□□□□ 0.36
CHEK2-219ENST00000448511 CHMP7Q8WUX9 453 aaPredicted RBP17.31■□□□□ 0.36
CHEK2-219ENST00000448511 EEA1Q15075 1411 aa17.3■□□□□ 0.36
CHEK2-219ENST00000448511 CARMIL1Q5VZK9 1371 aa17.3■□□□□ 0.36
CHEK2-219ENST00000448511 FHAD1B1AJZ9 1412 aa17.3■□□□□ 0.36
CHEK2-219ENST00000448511 SYNJ2O15056 1496 aa17.28■□□□□ 0.36
CHEK2-219ENST00000448511 ADAMTS12P58397 1594 aa17.27■□□□□ 0.36
CHEK2-219ENST00000448511 PRXQ9BXM0 1461 aa17.23■□□□□ 0.35
CHEK2-219ENST00000448511 CUL7Q14999 1698 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms