RNA–Protein interactions for RNA: ENST00000447470.1

CDRT15P2-201, Transcript of CMT1A duplicated region transcript 15 pseudogene 2, humanhuman

BASIC

Gene CDRT15P2, Length 416 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT15P2-201ENST00000447470 NISCHQ9Y2I1 1504 aa25.33■■□□□ 1.65
CDRT15P2-201ENST00000447470 ABCC9O60706 1549 aa22.76■■□□□ 1.23
CDRT15P2-201ENST00000447470 CCDC180Q9P1Z9 1646 aa22.59■■□□□ 1.21
CDRT15P2-201ENST00000447470 DNAJC5BQ9UF47 199 aa21.56■■□□□ 1.04
CDRT15P2-201ENST00000447470 RB1CC1Q8TDY2 1594 aa21.53■■□□□ 1.04
CDRT15P2-201ENST00000447470 NACADO15069 1562 aa21.38■■□□□ 1.01
CDRT15P2-201ENST00000447470 ZCCHC6Q5VYS8 1495 aaKnown RBP21.36■■□□□ 1.01
CDRT15P2-201ENST00000447470 PABPN1Q86U42 306 aaKnown RBP eCLIP21.17■□□□□ 0.98
CDRT15P2-201ENST00000447470 DCAF8L2P0C7V8 631 aa21.15■□□□□ 0.98
CDRT15P2-201ENST00000447470 UNC13AQ9UPW8 1703 aa21.14■□□□□ 0.97
CDRT15P2-201ENST00000447470 BICRAQ9NZM4 1560 aa21.08■□□□□ 0.97
CDRT15P2-201ENST00000447470 MYO15BQ96JP2 1530 aa21.08■□□□□ 0.96
CDRT15P2-201ENST00000447470 DCAF1Q9Y4B6 1507 aa21.05■□□□□ 0.96
CDRT15P2-201ENST00000447470 SHROOM4Q9ULL8 1493 aa20.73■□□□□ 0.91
CDRT15P2-201ENST00000447470 SCRIBQ14160 1630 aa20.64■□□□□ 0.89
CDRT15P2-201ENST00000447470 CC2D2AQ9P2K1 1620 aa20.54■□□□□ 0.88
CDRT15P2-201ENST00000447470 EIF4G1Q04637 1599 aaKnown RBP20.48■□□□□ 0.87
CDRT15P2-201ENST00000447470 CECR2Q9BXF3 1484 aa20.48■□□□□ 0.87
CDRT15P2-201ENST00000447470 SUPT5HO00267 1087 aaKnown RBP20.15■□□□□ 0.82
CDRT15P2-201ENST00000447470 NCAPD3P42695 1498 aa19.79■□□□□ 0.76
CDRT15P2-201ENST00000447470 RSF1Q96T23 1441 aaPredicted RBP19.78■□□□□ 0.76
CDRT15P2-201ENST00000447470 ATAD2BQ9ULI0 1458 aa19.74■□□□□ 0.75
CDRT15P2-201ENST00000447470 DNAJC5Q9H3Z4 198 aa19.72■□□□□ 0.75
CDRT15P2-201ENST00000447470 SMARCA4P51532 1647 aa19.68■□□□□ 0.74
CDRT15P2-201ENST00000447470 HMGXB3Q12766 1538 aa19.62■□□□□ 0.73
CDRT15P2-201ENST00000447470 CUX2O14529 1486 aa19.6■□□□□ 0.73
CDRT15P2-201ENST00000447470 NESP48681 1621 aa19.58■□□□□ 0.73
CDRT15P2-201ENST00000447470 SMARCA2P51531 1590 aa19.58■□□□□ 0.73
CDRT15P2-201ENST00000447470 CHIC1Q5VXU3 224 aa19.56■□□□□ 0.72
CDRT15P2-201ENST00000447470 ERCC6Q03468 1493 aa19.54■□□□□ 0.72
CDRT15P2-201ENST00000447470 BAZ1AQ9NRL2 1556 aaPredicted RBP19.54■□□□□ 0.72
CDRT15P2-201ENST00000447470 MROH2BQ7Z745 1585 aa19.52■□□□□ 0.71
CDRT15P2-201ENST00000447470 PEG3Q9GZU2 1588 aa19.5■□□□□ 0.71
CDRT15P2-201ENST00000447470 BAZ1BQ9UIG0 1483 aaKnown RBP19.48■□□□□ 0.71
CDRT15P2-201ENST00000447470 THOC2Q8NI27 1593 aaKnown RBP19.39■□□□□ 0.69
CDRT15P2-201ENST00000447470 WIZO95785 1651 aa19.3■□□□□ 0.68
CDRT15P2-201ENST00000447470 LAMC3Q9Y6N6 1575 aa19.3■□□□□ 0.68
CDRT15P2-201ENST00000447470 KIF21AQ7Z4S6 1674 aa19.26■□□□□ 0.67
CDRT15P2-201ENST00000447470 TOP2AP11388 1531 aaKnown RBP19.25■□□□□ 0.67
CDRT15P2-201ENST00000447470 CADPSQ9ULU8 1353 aa19.16■□□□□ 0.66
CDRT15P2-201ENST00000447470 PDS5BQ9NTI5 1447 aa19.16■□□□□ 0.66
CDRT15P2-201ENST00000447470 MRC2Q9UBG0 1479 aa19.07■□□□□ 0.64
CDRT15P2-201ENST00000447470 WDR62O43379 1518 aa19.06■□□□□ 0.64
CDRT15P2-201ENST00000447470 CCDC88BA6NC98 1476 aa19.03■□□□□ 0.64
CDRT15P2-201ENST00000447470 TRIM41Q8WV44 630 aa19.02■□□□□ 0.64
CDRT15P2-201ENST00000447470 CFTRP13569 1480 aa18.95■□□□□ 0.62
CDRT15P2-201ENST00000447470 FANCD2Q9BXW9 1451 aa18.95■□□□□ 0.62
CDRT15P2-201ENST00000447470 CEP164Q9UPV0 1460 aa18.94■□□□□ 0.62
CDRT15P2-201ENST00000447470 URB2Q14146 1524 aaKnown RBP18.87■□□□□ 0.61
CDRT15P2-201ENST00000447470 LOC105371045A0A1W2PR82 267 aa18.72■□□□□ 0.59
CDRT15P2-201ENST00000447470 PRDM2Q13029 1718 aa18.67■□□□□ 0.58
CDRT15P2-201ENST00000447470 ZNF608Q9ULD9 1512 aaPredicted RBP18.66■□□□□ 0.58
CDRT15P2-201ENST00000447470 EEA1Q15075 1411 aa18.63■□□□□ 0.57
CDRT15P2-201ENST00000447470 ABCC8Q09428 1581 aa18.63■□□□□ 0.57
CDRT15P2-201ENST00000447470 WRNQ14191 1432 aaPredicted RBP eCLIP18.61■□□□□ 0.57
CDRT15P2-201ENST00000447470 OSCARQ8IYS5 282 aa18.61■□□□□ 0.57
CDRT15P2-201ENST00000447470 TOPBP1Q92547 1522 aa18.6■□□□□ 0.57
CDRT15P2-201ENST00000447470 IFT140Q96RY7 1462 aa18.58■□□□□ 0.56
CDRT15P2-201ENST00000447470 FAM9AQ8IZU1 332 aaPredicted RBP18.55■□□□□ 0.56
CDRT15P2-201ENST00000447470 RIMBP3CA6NJZ7 1639 aa18.5■□□□□ 0.55
CDRT15P2-201ENST00000447470 RIMBP3BA6NNM3 1639 aa18.5■□□□□ 0.55
CDRT15P2-201ENST00000447470 RIMBP3Q9UFD9 1639 aa18.5■□□□□ 0.55
CDRT15P2-201ENST00000447470 EIF4G3O43432 1585 aaKnown RBP18.5■□□□□ 0.55
CDRT15P2-201ENST00000447470 DNMBPQ6XZF7 1577 aa18.5■□□□□ 0.55
CDRT15P2-201ENST00000447470 TARBP1Q13395 1621 aaKnown RBP18.48■□□□□ 0.55
CDRT15P2-201ENST00000447470 ARHGEF11O15085 1522 aa18.44■□□□□ 0.54
CDRT15P2-201ENST00000447470 AQRO60306 1485 aaKnown RBP eCLIP18.43■□□□□ 0.54
CDRT15P2-201ENST00000447470 SYNJ1O43426 1573 aa18.42■□□□□ 0.54
CDRT15P2-201ENST00000447470 SOGA1O94964 1423 aa18.42■□□□□ 0.54
CDRT15P2-201ENST00000447470 POLA1P09884 1462 aaPredicted RBP18.42■□□□□ 0.54
CDRT15P2-201ENST00000447470 CSRNP3Q8WYN3 585 aa18.41■□□□□ 0.54
CDRT15P2-201ENST00000447470 TOP2BQ02880 1626 aa18.39■□□□□ 0.53
CDRT15P2-201ENST00000447470 RAD54L2Q9Y4B4 1467 aa18.38■□□□□ 0.53
CDRT15P2-201ENST00000447470 CHD1O14646 1710 aa18.36■□□□□ 0.53
CDRT15P2-201ENST00000447470 BIVM-ERCC5R4GMW8 1640 aa18.34■□□□□ 0.53
CDRT15P2-201ENST00000447470 TNIKQ9UKE5 1360 aa18.34■□□□□ 0.53
CDRT15P2-201ENST00000447470 GOLGA3Q08378 1498 aa18.3■□□□□ 0.52
CDRT15P2-201ENST00000447470 ARAP1Q96P48 1450 aa18.3■□□□□ 0.52
CDRT15P2-201ENST00000447470 CUX1P39880 1505 aa18.29■□□□□ 0.52
CDRT15P2-201ENST00000447470 TDRD9Q8NDG6 1382 aaKnown RBP18.29■□□□□ 0.52
CDRT15P2-201ENST00000447470 RUSC2Q8N2Y8 1516 aa18.28■□□□□ 0.52
CDRT15P2-201ENST00000447470 FGD5Q6ZNL6 1462 aa18.27■□□□□ 0.52
CDRT15P2-201ENST00000447470 TRIM26Q12899 539 aaPredicted RBP18.27■□□□□ 0.52
CDRT15P2-201ENST00000447470 KIF21BO75037 1637 aa18.25■□□□□ 0.51
CDRT15P2-201ENST00000447470 SNAPC4Q5SXM2 1469 aa18.24■□□□□ 0.51
CDRT15P2-201ENST00000447470 CYB5RLQ6IPT4 315 aa18.23■□□□□ 0.51
CDRT15P2-201ENST00000447470 PCGF6Q9BYE7 350 aa18.23■□□□□ 0.51
CDRT15P2-201ENST00000447470 CLASP1Q7Z460 1538 aa18.21■□□□□ 0.51
CDRT15P2-201ENST00000447470 FBLN2P98095 1184 aa18.19■□□□□ 0.5
CDRT15P2-201ENST00000447470 CEP162Q5TB80 1403 aa18.19■□□□□ 0.5
CDRT15P2-201ENST00000447470 WDR97A6NE52 1622 aa18.18■□□□□ 0.5
CDRT15P2-201ENST00000447470 EHMT2Q96KQ7 1210 aa18.17■□□□□ 0.5
CDRT15P2-201ENST00000447470 KIF27Q86VH2 1401 aa18.15■□□□□ 0.5
CDRT15P2-201ENST00000447470 UBTFP17480 764 aaKnown RBP18.13■□□□□ 0.49
CDRT15P2-201ENST00000447470 MAGI1Q96QZ7 1491 aaPredicted RBP18.13■□□□□ 0.49
CDRT15P2-201ENST00000447470 GRIN2BQ13224 1484 aa18.12■□□□□ 0.49
CDRT15P2-201ENST00000447470 ERICH3Q5RHP9 1530 aa18.11■□□□□ 0.49
CDRT15P2-201ENST00000447470 PRXQ9BXM0 1461 aa18.1■□□□□ 0.49
CDRT15P2-201ENST00000447470 SYNJ2O15056 1496 aa18.08■□□□□ 0.49
CDRT15P2-201ENST00000447470 HRCP23327 699 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms