RNA–Protein interactions for RNA: ENST00000446564.5

COA1-211, Transcript of cytochrome c oxidase assembly factor 1 homolog, humanhuman

TSL 2

Gene COA1, Length 1,177 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COA1-211ENST00000446564 AEBP2Q6ZN18 517 aaPredicted RBP17.93■□□□□ 0.46
COA1-211ENST00000446564 NISCHQ9Y2I1 1504 aa17.62■□□□□ 0.41
COA1-211ENST00000446564 CHIC1Q5VXU3 224 aa17.49■□□□□ 0.39
COA1-211ENST00000446564 CCDC180Q9P1Z9 1646 aa15.41■□□□□ 0.06
COA1-211ENST00000446564 SENP3Q9H4L4 574 aaPredicted RBP15.33■□□□□ 0.04
COA1-211ENST00000446564 PHF23Q9BUL5 403 aaPredicted RBP15.32■□□□□ 0.04
COA1-211ENST00000446564 ZCCHC6Q5VYS8 1495 aaKnown RBP14.8□□□□□ -0.04
COA1-211ENST00000446564 ABCC9O60706 1549 aa14.61□□□□□ -0.07
COA1-211ENST00000446564 DCAF8L2P0C7V8 631 aa14.59□□□□□ -0.07
COA1-211ENST00000446564 DCAF1Q9Y4B6 1507 aa14.55□□□□□ -0.08
COA1-211ENST00000446564 SHROOM4Q9ULL8 1493 aa14.38□□□□□ -0.11
COA1-211ENST00000446564 MYO15BQ96JP2 1530 aa14.38□□□□□ -0.11
COA1-211ENST00000446564 NACADO15069 1562 aa14.34□□□□□ -0.11
COA1-211ENST00000446564 RB1CC1Q8TDY2 1594 aa14.25□□□□□ -0.13
COA1-211ENST00000446564 PLPPR3Q6T4P5 718 aa14.23□□□□□ -0.13
COA1-211ENST00000446564 SCRIBQ14160 1630 aa14.19□□□□□ -0.14
COA1-211ENST00000446564 FOXD1Q16676 465 aa14.17□□□□□ -0.14
COA1-211ENST00000446564 UNC13AQ9UPW8 1703 aa13.97□□□□□ -0.17
COA1-211ENST00000446564 SUPT5HO00267 1087 aaKnown RBP13.8□□□□□ -0.2
COA1-211ENST00000446564 BICRAQ9NZM4 1560 aa13.79□□□□□ -0.2
COA1-211ENST00000446564 PABPN1Q86U42 306 aaKnown RBP eCLIP13.75□□□□□ -0.21
COA1-211ENST00000446564 CECR2Q9BXF3 1484 aa13.69□□□□□ -0.22
COA1-211ENST00000446564 RSF1Q96T23 1441 aaPredicted RBP13.64□□□□□ -0.23
COA1-211ENST00000446564 MROH2BQ7Z745 1585 aa13.62□□□□□ -0.23
COA1-211ENST00000446564 BAZ1AQ9NRL2 1556 aaPredicted RBP13.62□□□□□ -0.23
COA1-211ENST00000446564 ADRA2BP18089 450 aa13.58□□□□□ -0.24
COA1-211ENST00000446564 SMARCA4P51532 1647 aa13.57□□□□□ -0.24
COA1-211ENST00000446564 PPP6R1Q9UPN7 881 aa13.55□□□□□ -0.24
COA1-211ENST00000446564 WIZO95785 1651 aa13.52□□□□□ -0.25
COA1-211ENST00000446564 PIAS4Q8N2W9 510 aaPredicted RBP13.41□□□□□ -0.26
COA1-211ENST00000446564 EIF4G1Q04637 1599 aaKnown RBP13.4□□□□□ -0.26
COA1-211ENST00000446564 TOP2AP11388 1531 aaKnown RBP13.38□□□□□ -0.27
COA1-211ENST00000446564 PEG3Q9GZU2 1588 aa13.37□□□□□ -0.27
COA1-211ENST00000446564 SMARCA2P51531 1590 aa13.34□□□□□ -0.27
COA1-211ENST00000446564 ATAD2BQ9ULI0 1458 aa13.34□□□□□ -0.27
COA1-211ENST00000446564 BAZ1BQ9UIG0 1483 aaKnown RBP13.29□□□□□ -0.28
COA1-211ENST00000446564 CC2D2AQ9P2K1 1620 aa13.22□□□□□ -0.29
COA1-211ENST00000446564 HMGXB3Q12766 1538 aa13.22□□□□□ -0.29
COA1-211ENST00000446564 CCDC88BA6NC98 1476 aa13.22□□□□□ -0.29
COA1-211ENST00000446564 NCAPD3P42695 1498 aa13.22□□□□□ -0.29
COA1-211ENST00000446564 MSH5O43196 834 aa13.18□□□□□ -0.3
COA1-211ENST00000446564 TRIM41Q8WV44 630 aa12.97□□□□□ -0.33
COA1-211ENST00000446564 ABCC8Q09428 1581 aa12.95□□□□□ -0.34
COA1-211ENST00000446564 CFTRP13569 1480 aa12.91□□□□□ -0.34
COA1-211ENST00000446564 PRDM2Q13029 1718 aa12.91□□□□□ -0.34
COA1-211ENST00000446564 CADPSQ9ULU8 1353 aa12.88□□□□□ -0.35
COA1-211ENST00000446564 DNAJC5BQ9UF47 199 aa12.87□□□□□ -0.35
COA1-211ENST00000446564 WRNQ14191 1432 aaPredicted RBP eCLIP12.86□□□□□ -0.35
COA1-211ENST00000446564 SYNJ1O43426 1573 aa12.82□□□□□ -0.36
COA1-211ENST00000446564 NESP48681 1621 aa12.8□□□□□ -0.36
COA1-211ENST00000446564 LAMC3Q9Y6N6 1575 aa12.8□□□□□ -0.36
COA1-211ENST00000446564 BIVM-ERCC5R4GMW8 1640 aa12.77□□□□□ -0.37
COA1-211ENST00000446564 FANCD2Q9BXW9 1451 aa12.76□□□□□ -0.37
COA1-211ENST00000446564 TOP2BQ02880 1626 aa12.76□□□□□ -0.37
COA1-211ENST00000446564 FAM9AQ8IZU1 332 aaPredicted RBP12.75□□□□□ -0.37
COA1-211ENST00000446564 CUX1P39880 1505 aa12.74□□□□□ -0.37
COA1-211ENST00000446564 CEP164Q9UPV0 1460 aa12.7□□□□□ -0.38
COA1-211ENST00000446564 PDS5BQ9NTI5 1447 aa12.7□□□□□ -0.38
COA1-211ENST00000446564 SOGA1O94964 1423 aa12.68□□□□□ -0.38
COA1-211ENST00000446564 KIF21AQ7Z4S6 1674 aa12.67□□□□□ -0.38
COA1-211ENST00000446564 LOC105371045A0A1W2PR82 267 aa12.66□□□□□ -0.38
COA1-211ENST00000446564 DNMBPQ6XZF7 1577 aa12.65□□□□□ -0.38
COA1-211ENST00000446564 EEA1Q15075 1411 aa12.65□□□□□ -0.38
COA1-211ENST00000446564 RUSC2Q8N2Y8 1516 aa12.64□□□□□ -0.39
COA1-211ENST00000446564 TOPBP1Q92547 1522 aa12.62□□□□□ -0.39
COA1-211ENST00000446564 FGD5Q6ZNL6 1462 aa12.62□□□□□ -0.39
COA1-211ENST00000446564 URB2Q14146 1524 aaKnown RBP12.6□□□□□ -0.39
COA1-211ENST00000446564 EHMT2Q96KQ7 1210 aa12.59□□□□□ -0.39
COA1-211ENST00000446564 CSRNP3Q8WYN3 585 aa12.57□□□□□ -0.4
COA1-211ENST00000446564 MRC2Q9UBG0 1479 aa12.56□□□□□ -0.4
COA1-211ENST00000446564 POLA1P09884 1462 aaPredicted RBP12.55□□□□□ -0.4
COA1-211ENST00000446564 SCAF1Q9H7N4 1312 aaKnown RBP12.55□□□□□ -0.4
COA1-211ENST00000446564 ERCC6Q03468 1493 aa12.54□□□□□ -0.4
COA1-211ENST00000446564 KIF27Q86VH2 1401 aa12.54□□□□□ -0.4
COA1-211ENST00000446564 CUX2O14529 1486 aa12.53□□□□□ -0.4
COA1-211ENST00000446564 RAD54L2Q9Y4B4 1467 aa12.52□□□□□ -0.41
COA1-211ENST00000446564 KIF21BO75037 1637 aa12.51□□□□□ -0.41
COA1-211ENST00000446564 PPP4R3CPQ6ZMV5 832 aa12.5□□□□□ -0.41
COA1-211ENST00000446564 GOLGA3Q08378 1498 aa12.5□□□□□ -0.41
COA1-211ENST00000446564 ABCA10Q8WWZ4 1543 aa12.49□□□□□ -0.41
COA1-211ENST00000446564 WDR62O43379 1518 aa12.48□□□□□ -0.41
COA1-211ENST00000446564 WDR97A6NE52 1622 aa12.48□□□□□ -0.41
COA1-211ENST00000446564 THOC2Q8NI27 1593 aaKnown RBP12.47□□□□□ -0.41
COA1-211ENST00000446564 UBTFP17480 764 aaKnown RBP12.44□□□□□ -0.42
COA1-211ENST00000446564 RAPGEF2Q9Y4G8 1499 aa12.43□□□□□ -0.42
COA1-211ENST00000446564 TARBP1Q13395 1621 aaKnown RBP12.43□□□□□ -0.42
COA1-211ENST00000446564 TNIKQ9UKE5 1360 aa12.43□□□□□ -0.42
COA1-211ENST00000446564 PRXQ9BXM0 1461 aa12.42□□□□□ -0.42
COA1-211ENST00000446564 ERICH3Q5RHP9 1530 aa12.42□□□□□ -0.42
COA1-211ENST00000446564 ABCA5Q8WWZ7 1642 aa12.4□□□□□ -0.42
COA1-211ENST00000446564 IGF1RP08069 1367 aa12.4□□□□□ -0.42
COA1-211ENST00000446564 IFT140Q96RY7 1462 aa12.39□□□□□ -0.43
COA1-211ENST00000446564 TDRD9Q8NDG6 1382 aaKnown RBP12.38□□□□□ -0.43
COA1-211ENST00000446564 GAPVD1Q14C86 1478 aa12.37□□□□□ -0.43
COA1-211ENST00000446564 CEP162Q5TB80 1403 aa12.37□□□□□ -0.43
COA1-211ENST00000446564 CUL7Q14999 1698 aa12.36□□□□□ -0.43
COA1-211ENST00000446564 CARMIL1Q5VZK9 1371 aa12.36□□□□□ -0.43
COA1-211ENST00000446564 PBRM1Q86U86 1689 aa12.35□□□□□ -0.43
COA1-211ENST00000446564 MAPK8IP2Q13387 824 aaPredicted RBP12.33□□□□□ -0.44
COA1-211ENST00000446564 AQRO60306 1485 aaKnown RBP eCLIP12.32□□□□□ -0.444e-6■□□□□ 10.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms