RNA–Protein interactions for RNA: ENST00000444490.6

ECM2-204, Transcript of extracellular matrix protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ECM2, Length 2,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM2-204ENST00000444490 NISCHQ9Y2I1 1504 aa25.62■■□□□ 1.69
ECM2-204ENST00000444490 CCDC180Q9P1Z9 1646 aa22.34■■□□□ 1.17
ECM2-204ENST00000444490 ABCC9O60706 1549 aa21.6■■□□□ 1.05
ECM2-204ENST00000444490 DCAF8L2P0C7V8 631 aa21.53■■□□□ 1.04
ECM2-204ENST00000444490 ZCCHC6Q5VYS8 1495 aaKnown RBP21.45■■□□□ 1.03
ECM2-204ENST00000444490 SHROOM4Q9ULL8 1493 aa21.04■□□□□ 0.96
ECM2-204ENST00000444490 DCAF1Q9Y4B6 1507 aa21.03■□□□□ 0.96
ECM2-204ENST00000444490 NACADO15069 1562 aa20.88■□□□□ 0.93
ECM2-204ENST00000444490 MYO15BQ96JP2 1530 aa20.82■□□□□ 0.92
ECM2-204ENST00000444490 RB1CC1Q8TDY2 1594 aa20.8■□□□□ 0.92
ECM2-204ENST00000444490 SCRIBQ14160 1630 aa20.74■□□□□ 0.91
ECM2-204ENST00000444490 UNC13AQ9UPW8 1703 aa20.46■□□□□ 0.87
ECM2-204ENST00000444490 PABPN1Q86U42 306 aaKnown RBP eCLIP20.4■□□□□ 0.86
ECM2-204ENST00000444490 BICRAQ9NZM4 1560 aa20.24■□□□□ 0.83
ECM2-204ENST00000444490 SUPT5HO00267 1087 aaKnown RBP20.1■□□□□ 0.81
ECM2-204ENST00000444490 CECR2Q9BXF3 1484 aa20.05■□□□□ 0.8
ECM2-204ENST00000444490 MROH2BQ7Z745 1585 aa19.87■□□□□ 0.77
ECM2-204ENST00000444490 RSF1Q96T23 1441 aaPredicted RBP19.83■□□□□ 0.77
ECM2-204ENST00000444490 BAZ1AQ9NRL2 1556 aaPredicted RBP19.77■□□□□ 0.76
ECM2-204ENST00000444490 SMARCA4P51532 1647 aa19.76■□□□□ 0.75
ECM2-204ENST00000444490 WIZO95785 1651 aa19.71■□□□□ 0.75
ECM2-204ENST00000444490 EIF4G1Q04637 1599 aaKnown RBP19.64■□□□□ 0.74
ECM2-204ENST00000444490 ATAD2BQ9ULI0 1458 aa19.49■□□□□ 0.71
ECM2-204ENST00000444490 CC2D2AQ9P2K1 1620 aa19.45■□□□□ 0.7
ECM2-204ENST00000444490 SMARCA2P51531 1590 aa19.42■□□□□ 0.7
ECM2-204ENST00000444490 PEG3Q9GZU2 1588 aa19.41■□□□□ 0.7
ECM2-204ENST00000444490 TOP2AP11388 1531 aaKnown RBP19.39■□□□□ 0.7
ECM2-204ENST00000444490 BAZ1BQ9UIG0 1483 aaKnown RBP19.39■□□□□ 0.7
ECM2-204ENST00000444490 DNAJC5BQ9UF47 199 aa19.31■□□□□ 0.68
ECM2-204ENST00000444490 NCAPD3P42695 1498 aa19.3■□□□□ 0.68
ECM2-204ENST00000444490 CCDC88BA6NC98 1476 aa19.27■□□□□ 0.67
ECM2-204ENST00000444490 HMGXB3Q12766 1538 aa19.23■□□□□ 0.67
ECM2-204ENST00000444490 CHIC1Q5VXU3 224 aa19.01■□□□□ 0.63
ECM2-204ENST00000444490 NESP48681 1621 aa18.89■□□□□ 0.62
ECM2-204ENST00000444490 ABCC8Q09428 1581 aa18.87■□□□□ 0.61
ECM2-204ENST00000444490 CADPSQ9ULU8 1353 aa18.84■□□□□ 0.61
ECM2-204ENST00000444490 CFTRP13569 1480 aa18.83■□□□□ 0.61
ECM2-204ENST00000444490 TRIM41Q8WV44 630 aa18.8■□□□□ 0.6
ECM2-204ENST00000444490 PRDM2Q13029 1718 aa18.68■□□□□ 0.58
ECM2-204ENST00000444490 FANCD2Q9BXW9 1451 aa18.68■□□□□ 0.58
ECM2-204ENST00000444490 WRNQ14191 1432 aaPredicted RBP eCLIP18.67■□□□□ 0.58
ECM2-204ENST00000444490 LAMC3Q9Y6N6 1575 aa18.67■□□□□ 0.58
ECM2-204ENST00000444490 SYNJ1O43426 1573 aa18.65■□□□□ 0.58
ECM2-204ENST00000444490 FAM9AQ8IZU1 332 aaPredicted RBP18.63■□□□□ 0.57
ECM2-204ENST00000444490 KIF21AQ7Z4S6 1674 aa18.59■□□□□ 0.57
ECM2-204ENST00000444490 CUX1P39880 1505 aa18.58■□□□□ 0.56
ECM2-204ENST00000444490 PDS5BQ9NTI5 1447 aa18.57■□□□□ 0.56
ECM2-204ENST00000444490 CEP164Q9UPV0 1460 aa18.56■□□□□ 0.56
ECM2-204ENST00000444490 EHMT2Q96KQ7 1210 aa18.51■□□□□ 0.55
ECM2-204ENST00000444490 TOP2BQ02880 1626 aa18.5■□□□□ 0.55
ECM2-204ENST00000444490 ERCC6Q03468 1493 aa18.49■□□□□ 0.55
ECM2-204ENST00000444490 URB2Q14146 1524 aaKnown RBP18.47■□□□□ 0.55
ECM2-204ENST00000444490 BIVM-ERCC5R4GMW8 1640 aa18.46■□□□□ 0.55
ECM2-204ENST00000444490 SOGA1O94964 1423 aa18.46■□□□□ 0.55
ECM2-204ENST00000444490 TOPBP1Q92547 1522 aa18.44■□□□□ 0.54
ECM2-204ENST00000444490 RUSC2Q8N2Y8 1516 aa18.44■□□□□ 0.54
ECM2-204ENST00000444490 FGD5Q6ZNL6 1462 aa18.41■□□□□ 0.54
ECM2-204ENST00000444490 DNMBPQ6XZF7 1577 aa18.41■□□□□ 0.54
ECM2-204ENST00000444490 LOC105371045A0A1W2PR82 267 aa18.4■□□□□ 0.54
ECM2-204ENST00000444490 MRC2Q9UBG0 1479 aa18.37■□□□□ 0.53
ECM2-204ENST00000444490 RAD54L2Q9Y4B4 1467 aa18.36■□□□□ 0.53
ECM2-204ENST00000444490 POLA1P09884 1462 aaPredicted RBP18.34■□□□□ 0.53
ECM2-204ENST00000444490 THOC2Q8NI27 1593 aaKnown RBP18.28■□□□□ 0.52
ECM2-204ENST00000444490 CUX2O14529 1486 aa18.27■□□□□ 0.52
ECM2-204ENST00000444490 WDR62O43379 1518 aa18.25■□□□□ 0.51
ECM2-204ENST00000444490 CSRNP3Q8WYN3 585 aa18.24■□□□□ 0.51
ECM2-204ENST00000444490 TDRD9Q8NDG6 1382 aaKnown RBP18.22■□□□□ 0.51
ECM2-204ENST00000444490 KIF27Q86VH2 1401 aa18.2■□□□□ 0.5
ECM2-204ENST00000444490 ABCA10Q8WWZ4 1543 aa18.16■□□□□ 0.5
ECM2-204ENST00000444490 EEA1Q15075 1411 aa18.16■□□□□ 0.5
ECM2-204ENST00000444490 TARBP1Q13395 1621 aaKnown RBP18.15■□□□□ 0.5
ECM2-204ENST00000444490 ZNF608Q9ULD9 1512 aaPredicted RBP18.13■□□□□ 0.49
ECM2-204ENST00000444490 WDR97A6NE52 1622 aa18.13■□□□□ 0.49
ECM2-204ENST00000444490 AQRO60306 1485 aaKnown RBP eCLIP18.12■□□□□ 0.49
ECM2-204ENST00000444490 IGF1RP08069 1367 aa18.09■□□□□ 0.49
ECM2-204ENST00000444490 IFT140Q96RY7 1462 aa18.09■□□□□ 0.49
ECM2-204ENST00000444490 UBTFP17480 764 aaKnown RBP18.08■□□□□ 0.49
ECM2-204ENST00000444490 GAPVD1Q14C86 1478 aa18.07■□□□□ 0.48
ECM2-204ENST00000444490 RAPGEF2Q9Y4G8 1499 aa18.06■□□□□ 0.48
ECM2-204ENST00000444490 ABCA5Q8WWZ7 1642 aa18.05■□□□□ 0.48
ECM2-204ENST00000444490 RANGAP1P46060 587 aaPredicted RBP18.04■□□□□ 0.48
ECM2-204ENST00000444490 CARMIL1Q5VZK9 1371 aa18.01■□□□□ 0.47
ECM2-204ENST00000444490 GOLGA3Q08378 1498 aa18■□□□□ 0.47
ECM2-204ENST00000444490 PRXQ9BXM0 1461 aa18■□□□□ 0.47
ECM2-204ENST00000444490 KIF21BO75037 1637 aa18■□□□□ 0.47
ECM2-204ENST00000444490 EIF4G3O43432 1585 aaKnown RBP17.99■□□□□ 0.47
ECM2-204ENST00000444490 PBRM1Q86U86 1689 aa17.97■□□□□ 0.47
ECM2-204ENST00000444490 GRIN2BQ13224 1484 aa17.93■□□□□ 0.46
ECM2-204ENST00000444490 ERICH3Q5RHP9 1530 aa17.92■□□□□ 0.46
ECM2-204ENST00000444490 SNAPC4Q5SXM2 1469 aa17.91■□□□□ 0.46
ECM2-204ENST00000444490 FBLN2P98095 1184 aa17.9■□□□□ 0.46
ECM2-204ENST00000444490 TNIKQ9UKE5 1360 aa17.89■□□□□ 0.45
ECM2-204ENST00000444490 CUL7Q14999 1698 aa17.88■□□□□ 0.45
ECM2-204ENST00000444490 CEP162Q5TB80 1403 aa17.85■□□□□ 0.45
ECM2-204ENST00000444490 ADAMTS12P58397 1594 aa17.85■□□□□ 0.45
ECM2-204ENST00000444490 FHAD1B1AJZ9 1412 aa17.83■□□□□ 0.44
ECM2-204ENST00000444490 CHMP7Q8WUX9 453 aaPredicted RBP17.8■□□□□ 0.44
ECM2-204ENST00000444490 CLIP1P30622 1438 aa17.76■□□□□ 0.43
ECM2-204ENST00000444490 MAGI1Q96QZ7 1491 aaPredicted RBP17.76■□□□□ 0.43
ECM2-204ENST00000444490 P3H3Q8IVL6 736 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms