RNA–Protein interactions for RNA: ENST00000443607.2

NFKBIE-202, Transcript of NFKB inhibitor epsilon, humanhuman

TSL 3

Gene NFKBIE, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIE-202ENST00000443607 NISCHQ9Y2I1 1504 aa24.07■■□□□ 1.44
NFKBIE-202ENST00000443607 CCDC180Q9P1Z9 1646 aa21.25■□□□□ 0.99
NFKBIE-202ENST00000443607 ABCC9O60706 1549 aa20.64■□□□□ 0.9
NFKBIE-202ENST00000443607 ZCCHC6Q5VYS8 1495 aaKnown RBP20.1■□□□□ 0.81
NFKBIE-202ENST00000443607 DCAF8L2P0C7V8 631 aa19.99■□□□□ 0.79
NFKBIE-202ENST00000443607 NACADO15069 1562 aa19.99■□□□□ 0.79
NFKBIE-202ENST00000443607 MYO15BQ96JP2 1530 aa19.97■□□□□ 0.79
NFKBIE-202ENST00000443607 DCAF1Q9Y4B6 1507 aa19.95■□□□□ 0.78
NFKBIE-202ENST00000443607 RB1CC1Q8TDY2 1594 aa19.93■□□□□ 0.78
NFKBIE-202ENST00000443607 UNC13AQ9UPW8 1703 aa19.4■□□□□ 0.7
NFKBIE-202ENST00000443607 SCRIBQ14160 1630 aa19.4■□□□□ 0.7
NFKBIE-202ENST00000443607 PABPN1Q86U42 306 aaKnown RBP eCLIP19.35■□□□□ 0.69
NFKBIE-202ENST00000443607 BICRAQ9NZM4 1560 aa19.35■□□□□ 0.69
NFKBIE-202ENST00000443607 SHROOM4Q9ULL8 1493 aa19.19■□□□□ 0.66
NFKBIE-202ENST00000443607 DNAJC5BQ9UF47 199 aa18.84■□□□□ 0.61
NFKBIE-202ENST00000443607 EIF4G1Q04637 1599 aaKnown RBP18.81■□□□□ 0.6
NFKBIE-202ENST00000443607 CECR2Q9BXF3 1484 aa18.73■□□□□ 0.59
NFKBIE-202ENST00000443607 CC2D2AQ9P2K1 1620 aa18.67■□□□□ 0.58
NFKBIE-202ENST00000443607 BAZ1AQ9NRL2 1556 aaPredicted RBP18.62■□□□□ 0.57
NFKBIE-202ENST00000443607 SMARCA4P51532 1647 aa18.6■□□□□ 0.57
NFKBIE-202ENST00000443607 MROH2BQ7Z745 1585 aa18.54■□□□□ 0.56
NFKBIE-202ENST00000443607 ATAD2BQ9ULI0 1458 aa18.51■□□□□ 0.55
NFKBIE-202ENST00000443607 NCAPD3P42695 1498 aa18.48■□□□□ 0.55
NFKBIE-202ENST00000443607 SMARCA2P51531 1590 aa18.46■□□□□ 0.55
NFKBIE-202ENST00000443607 PEG3Q9GZU2 1588 aa18.46■□□□□ 0.55
NFKBIE-202ENST00000443607 RSF1Q96T23 1441 aaPredicted RBP18.43■□□□□ 0.54
NFKBIE-202ENST00000443607 HMGXB3Q12766 1538 aa18.36■□□□□ 0.53
NFKBIE-202ENST00000443607 BAZ1BQ9UIG0 1483 aaKnown RBP18.33■□□□□ 0.52
NFKBIE-202ENST00000443607 WIZO95785 1651 aa18.3■□□□□ 0.52
NFKBIE-202ENST00000443607 TOP2AP11388 1531 aaKnown RBP18.16■□□□□ 0.5
NFKBIE-202ENST00000443607 SUPT5HO00267 1087 aaKnown RBP18.06■□□□□ 0.48
NFKBIE-202ENST00000443607 CCDC88BA6NC98 1476 aa17.97■□□□□ 0.47
NFKBIE-202ENST00000443607 CADPSQ9ULU8 1353 aa17.95■□□□□ 0.46
NFKBIE-202ENST00000443607 NESP48681 1621 aa17.92■□□□□ 0.46
NFKBIE-202ENST00000443607 LAMC3Q9Y6N6 1575 aa17.9■□□□□ 0.46
NFKBIE-202ENST00000443607 CFTRP13569 1480 aa17.88■□□□□ 0.45
NFKBIE-202ENST00000443607 PDS5BQ9NTI5 1447 aa17.81■□□□□ 0.44
NFKBIE-202ENST00000443607 ERCC6Q03468 1493 aa17.76■□□□□ 0.43
NFKBIE-202ENST00000443607 FANCD2Q9BXW9 1451 aa17.7■□□□□ 0.42
NFKBIE-202ENST00000443607 CEP164Q9UPV0 1460 aa17.65■□□□□ 0.42
NFKBIE-202ENST00000443607 KIF21AQ7Z4S6 1674 aa17.64■□□□□ 0.42
NFKBIE-202ENST00000443607 PRDM2Q13029 1718 aa17.61■□□□□ 0.41
NFKBIE-202ENST00000443607 MRC2Q9UBG0 1479 aa17.6■□□□□ 0.41
NFKBIE-202ENST00000443607 THOC2Q8NI27 1593 aaKnown RBP17.59■□□□□ 0.41
NFKBIE-202ENST00000443607 CUX2O14529 1486 aa17.54■□□□□ 0.4
NFKBIE-202ENST00000443607 WDR62O43379 1518 aa17.53■□□□□ 0.4
NFKBIE-202ENST00000443607 URB2Q14146 1524 aaKnown RBP17.52■□□□□ 0.4
NFKBIE-202ENST00000443607 ABCC8Q09428 1581 aa17.46■□□□□ 0.39
NFKBIE-202ENST00000443607 TOPBP1Q92547 1522 aa17.44■□□□□ 0.38
NFKBIE-202ENST00000443607 DNMBPQ6XZF7 1577 aa17.42■□□□□ 0.38
NFKBIE-202ENST00000443607 CUX1P39880 1505 aa17.38■□□□□ 0.37
NFKBIE-202ENST00000443607 WRNQ14191 1432 aaPredicted RBP eCLIP17.35■□□□□ 0.37
NFKBIE-202ENST00000443607 POLA1P09884 1462 aaPredicted RBP17.31■□□□□ 0.36
NFKBIE-202ENST00000443607 IFT140Q96RY7 1462 aa17.3■□□□□ 0.36
NFKBIE-202ENST00000443607 FGD5Q6ZNL6 1462 aa17.29■□□□□ 0.36
NFKBIE-202ENST00000443607 TOP2BQ02880 1626 aa17.27■□□□□ 0.36
NFKBIE-202ENST00000443607 SYNJ1O43426 1573 aa17.27■□□□□ 0.35
NFKBIE-202ENST00000443607 SOGA1O94964 1423 aa17.25■□□□□ 0.35
NFKBIE-202ENST00000443607 BIVM-ERCC5R4GMW8 1640 aa17.24■□□□□ 0.35
NFKBIE-202ENST00000443607 RAD54L2Q9Y4B4 1467 aa17.23■□□□□ 0.35
NFKBIE-202ENST00000443607 TARBP1Q13395 1621 aaKnown RBP17.22■□□□□ 0.35
NFKBIE-202ENST00000443607 ZNF608Q9ULD9 1512 aaPredicted RBP17.2■□□□□ 0.34
NFKBIE-202ENST00000443607 ABCA10Q8WWZ4 1543 aa17.16■□□□□ 0.34
NFKBIE-202ENST00000443607 TDRD9Q8NDG6 1382 aaKnown RBP17.14■□□□□ 0.33
NFKBIE-202ENST00000443607 AQRO60306 1485 aaKnown RBP eCLIP17.13■□□□□ 0.33
NFKBIE-202ENST00000443607 WDR97A6NE52 1622 aa17.1■□□□□ 0.33
NFKBIE-202ENST00000443607 EIF4G3O43432 1585 aaKnown RBP17.09■□□□□ 0.33
NFKBIE-202ENST00000443607 TRIM41Q8WV44 630 aa17.07■□□□□ 0.32
NFKBIE-202ENST00000443607 GAPVD1Q14C86 1478 aa17.05■□□□□ 0.32
NFKBIE-202ENST00000443607 ABCA5Q8WWZ7 1642 aa17.03■□□□□ 0.32
NFKBIE-202ENST00000443607 GRIN2BQ13224 1484 aa17.02■□□□□ 0.32
NFKBIE-202ENST00000443607 CHIC1Q5VXU3 224 aa17.01■□□□□ 0.31
NFKBIE-202ENST00000443607 KIF27Q86VH2 1401 aa16.98■□□□□ 0.31
NFKBIE-202ENST00000443607 SNAPC4Q5SXM2 1469 aa16.96■□□□□ 0.31
NFKBIE-202ENST00000443607 MAGI1Q96QZ7 1491 aaPredicted RBP16.96■□□□□ 0.31
NFKBIE-202ENST00000443607 ERICH3Q5RHP9 1530 aa16.94■□□□□ 0.3
NFKBIE-202ENST00000443607 IGF1RP08069 1367 aa16.92■□□□□ 0.3
NFKBIE-202ENST00000443607 PBRM1Q86U86 1689 aa16.91■□□□□ 0.3
NFKBIE-202ENST00000443607 SYNJ2O15056 1496 aa16.89■□□□□ 0.29
NFKBIE-202ENST00000443607 OSCARQ8IYS5 282 aa16.88■□□□□ 0.29
NFKBIE-202ENST00000443607 FHAD1B1AJZ9 1412 aa16.87■□□□□ 0.29
NFKBIE-202ENST00000443607 RUSC2Q8N2Y8 1516 aa16.87■□□□□ 0.29
NFKBIE-202ENST00000443607 CHMP7Q8WUX9 453 aaPredicted RBP16.87■□□□□ 0.29
NFKBIE-202ENST00000443607 FBLN2P98095 1184 aa16.86■□□□□ 0.29
NFKBIE-202ENST00000443607 ADAMTS12P58397 1594 aa16.85■□□□□ 0.29
NFKBIE-202ENST00000443607 DNAJC5Q9H3Z4 198 aa16.83■□□□□ 0.28
NFKBIE-202ENST00000443607 CARMIL1Q5VZK9 1371 aa16.8■□□□□ 0.28
NFKBIE-202ENST00000443607 GRIN2AQ12879 1464 aa16.8■□□□□ 0.28
NFKBIE-202ENST00000443607 CHD1O14646 1710 aa16.79■□□□□ 0.28
NFKBIE-202ENST00000443607 EEA1Q15075 1411 aa16.79■□□□□ 0.28
NFKBIE-202ENST00000443607 CUL7Q14999 1698 aa16.77■□□□□ 0.28
NFKBIE-202ENST00000443607 CSRNP3Q8WYN3 585 aa16.75■□□□□ 0.27
NFKBIE-202ENST00000443607 NUP160Q12769 1436 aa16.75■□□□□ 0.27
NFKBIE-202ENST00000443607 PRXQ9BXM0 1461 aa16.73■□□□□ 0.27
NFKBIE-202ENST00000443607 RAPGEF2Q9Y4G8 1499 aa16.7■□□□□ 0.26
NFKBIE-202ENST00000443607 CLASP1Q7Z460 1538 aa16.7■□□□□ 0.26
NFKBIE-202ENST00000443607 CEP170Q5SW79 1584 aa16.68■□□□□ 0.26
NFKBIE-202ENST00000443607 FAM9AQ8IZU1 332 aaPredicted RBP16.67■□□□□ 0.26
NFKBIE-202ENST00000443607 KIAA0586Q9BVV6 1533 aa16.62■□□□□ 0.25
NFKBIE-202ENST00000443607 JPH4Q96JJ6 628 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms