RNA–Protein interactions for RNA: ENST00000442667.2

CDCA4P1-201, Transcript of cell division cycle associated 4 pseudogene 1, humanhuman

BASIC

Gene CDCA4P1, Length 624 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P1-201ENST00000442667 NISCHQ9Y2I1 1504 aa24.2■■□□□ 1.47
CDCA4P1-201ENST00000442667 CCDC180Q9P1Z9 1646 aa21.26■□□□□ 0.99
CDCA4P1-201ENST00000442667 ABCC9O60706 1549 aa20.73■□□□□ 0.91
CDCA4P1-201ENST00000442667 DCAF8L2P0C7V8 631 aa20.25■□□□□ 0.83
CDCA4P1-201ENST00000442667 ZCCHC6Q5VYS8 1495 aaKnown RBP20.2■□□□□ 0.82
CDCA4P1-201ENST00000442667 NACADO15069 1562 aa20.03■□□□□ 0.8
CDCA4P1-201ENST00000442667 MYO15BQ96JP2 1530 aa20.01■□□□□ 0.79
CDCA4P1-201ENST00000442667 DCAF1Q9Y4B6 1507 aa20.01■□□□□ 0.79
CDCA4P1-201ENST00000442667 RB1CC1Q8TDY2 1594 aa19.96■□□□□ 0.79
CDCA4P1-201ENST00000442667 PABPN1Q86U42 306 aaKnown RBP eCLIP19.51■□□□□ 0.71
CDCA4P1-201ENST00000442667 SCRIBQ14160 1630 aa19.5■□□□□ 0.71
CDCA4P1-201ENST00000442667 BICRAQ9NZM4 1560 aa19.38■□□□□ 0.69
CDCA4P1-201ENST00000442667 UNC13AQ9UPW8 1703 aa19.37■□□□□ 0.69
CDCA4P1-201ENST00000442667 SHROOM4Q9ULL8 1493 aa19.35■□□□□ 0.69
CDCA4P1-201ENST00000442667 DNAJC5BQ9UF47 199 aa18.92■□□□□ 0.62
CDCA4P1-201ENST00000442667 CECR2Q9BXF3 1484 aa18.88■□□□□ 0.61
CDCA4P1-201ENST00000442667 EIF4G1Q04637 1599 aaKnown RBP18.85■□□□□ 0.61
CDCA4P1-201ENST00000442667 BAZ1AQ9NRL2 1556 aaPredicted RBP18.7■□□□□ 0.58
CDCA4P1-201ENST00000442667 CC2D2AQ9P2K1 1620 aa18.69■□□□□ 0.58
CDCA4P1-201ENST00000442667 MROH2BQ7Z745 1585 aa18.67■□□□□ 0.58
CDCA4P1-201ENST00000442667 SMARCA4P51532 1647 aa18.67■□□□□ 0.58
CDCA4P1-201ENST00000442667 ATAD2BQ9ULI0 1458 aa18.59■□□□□ 0.57
CDCA4P1-201ENST00000442667 RSF1Q96T23 1441 aaPredicted RBP18.59■□□□□ 0.57
CDCA4P1-201ENST00000442667 NCAPD3P42695 1498 aa18.55■□□□□ 0.56
CDCA4P1-201ENST00000442667 SMARCA2P51531 1590 aa18.51■□□□□ 0.55
CDCA4P1-201ENST00000442667 PEG3Q9GZU2 1588 aa18.48■□□□□ 0.55
CDCA4P1-201ENST00000442667 BAZ1BQ9UIG0 1483 aaKnown RBP18.42■□□□□ 0.54
CDCA4P1-201ENST00000442667 WIZO95785 1651 aa18.41■□□□□ 0.54
CDCA4P1-201ENST00000442667 HMGXB3Q12766 1538 aa18.39■□□□□ 0.54
CDCA4P1-201ENST00000442667 SUPT5HO00267 1087 aaKnown RBP18.37■□□□□ 0.53
CDCA4P1-201ENST00000442667 TOP2AP11388 1531 aaKnown RBP18.25■□□□□ 0.51
CDCA4P1-201ENST00000442667 CCDC88BA6NC98 1476 aa18.11■□□□□ 0.49
CDCA4P1-201ENST00000442667 CADPSQ9ULU8 1353 aa18.05■□□□□ 0.48
CDCA4P1-201ENST00000442667 NESP48681 1621 aa18.01■□□□□ 0.47
CDCA4P1-201ENST00000442667 CFTRP13569 1480 aa17.96■□□□□ 0.47
CDCA4P1-201ENST00000442667 LAMC3Q9Y6N6 1575 aa17.92■□□□□ 0.46
CDCA4P1-201ENST00000442667 PDS5BQ9NTI5 1447 aa17.89■□□□□ 0.45
CDCA4P1-201ENST00000442667 ERCC6Q03468 1493 aa17.83■□□□□ 0.45
CDCA4P1-201ENST00000442667 FANCD2Q9BXW9 1451 aa17.8■□□□□ 0.44
CDCA4P1-201ENST00000442667 CEP164Q9UPV0 1460 aa17.72■□□□□ 0.43
CDCA4P1-201ENST00000442667 MRC2Q9UBG0 1479 aa17.66■□□□□ 0.42
CDCA4P1-201ENST00000442667 KIF21AQ7Z4S6 1674 aa17.65■□□□□ 0.42
CDCA4P1-201ENST00000442667 URB2Q14146 1524 aaKnown RBP17.6■□□□□ 0.41
CDCA4P1-201ENST00000442667 THOC2Q8NI27 1593 aaKnown RBP17.58■□□□□ 0.41
CDCA4P1-201ENST00000442667 PRDM2Q13029 1718 aa17.58■□□□□ 0.4
CDCA4P1-201ENST00000442667 WDR62O43379 1518 aa17.56■□□□□ 0.4
CDCA4P1-201ENST00000442667 ABCC8Q09428 1581 aa17.53■□□□□ 0.4
CDCA4P1-201ENST00000442667 CUX2O14529 1486 aa17.53■□□□□ 0.4
CDCA4P1-201ENST00000442667 TOPBP1Q92547 1522 aa17.52■□□□□ 0.4
CDCA4P1-201ENST00000442667 WRNQ14191 1432 aaPredicted RBP eCLIP17.5■□□□□ 0.39
CDCA4P1-201ENST00000442667 CUX1P39880 1505 aa17.49■□□□□ 0.39
CDCA4P1-201ENST00000442667 DNMBPQ6XZF7 1577 aa17.49■□□□□ 0.39
CDCA4P1-201ENST00000442667 POLA1P09884 1462 aaPredicted RBP17.4■□□□□ 0.38
CDCA4P1-201ENST00000442667 FGD5Q6ZNL6 1462 aa17.39■□□□□ 0.37
CDCA4P1-201ENST00000442667 SOGA1O94964 1423 aa17.38■□□□□ 0.37
CDCA4P1-201ENST00000442667 SYNJ1O43426 1573 aa17.37■□□□□ 0.37
CDCA4P1-201ENST00000442667 IFT140Q96RY7 1462 aa17.37■□□□□ 0.37
CDCA4P1-201ENST00000442667 RAD54L2Q9Y4B4 1467 aa17.36■□□□□ 0.37
CDCA4P1-201ENST00000442667 TOP2BQ02880 1626 aa17.35■□□□□ 0.37
CDCA4P1-201ENST00000442667 TRIM41Q8WV44 630 aa17.33■□□□□ 0.36
CDCA4P1-201ENST00000442667 BIVM-ERCC5R4GMW8 1640 aa17.3■□□□□ 0.36
CDCA4P1-201ENST00000442667 CHIC1Q5VXU3 224 aa17.3■□□□□ 0.36
CDCA4P1-201ENST00000442667 ZNF608Q9ULD9 1512 aaPredicted RBP17.29■□□□□ 0.36
CDCA4P1-201ENST00000442667 TDRD9Q8NDG6 1382 aaKnown RBP17.28■□□□□ 0.36
CDCA4P1-201ENST00000442667 TARBP1Q13395 1621 aaKnown RBP17.26■□□□□ 0.35
CDCA4P1-201ENST00000442667 AQRO60306 1485 aaKnown RBP eCLIP17.24■□□□□ 0.35
CDCA4P1-201ENST00000442667 ABCA10Q8WWZ4 1543 aa17.23■□□□□ 0.35
CDCA4P1-201ENST00000442667 GAPVD1Q14C86 1478 aa17.15■□□□□ 0.34
CDCA4P1-201ENST00000442667 KIF27Q86VH2 1401 aa17.13■□□□□ 0.33
CDCA4P1-201ENST00000442667 GRIN2BQ13224 1484 aa17.12■□□□□ 0.33
CDCA4P1-201ENST00000442667 EIF4G3O43432 1585 aaKnown RBP17.11■□□□□ 0.33
CDCA4P1-201ENST00000442667 WDR97A6NE52 1622 aa17.1■□□□□ 0.33
CDCA4P1-201ENST00000442667 IGF1RP08069 1367 aa17.07■□□□□ 0.32
CDCA4P1-201ENST00000442667 ABCA5Q8WWZ7 1642 aa17.07■□□□□ 0.32
CDCA4P1-201ENST00000442667 RUSC2Q8N2Y8 1516 aa17.06■□□□□ 0.32
CDCA4P1-201ENST00000442667 SNAPC4Q5SXM2 1469 aa17.05■□□□□ 0.32
CDCA4P1-201ENST00000442667 FBLN2P98095 1184 aa17.02■□□□□ 0.32
CDCA4P1-201ENST00000442667 MAGI1Q96QZ7 1491 aaPredicted RBP17.01■□□□□ 0.31
CDCA4P1-201ENST00000442667 CHMP7Q8WUX9 453 aaPredicted RBP17.01■□□□□ 0.31
CDCA4P1-201ENST00000442667 ERICH3Q5RHP9 1530 aa17.01■□□□□ 0.31
CDCA4P1-201ENST00000442667 FAM9AQ8IZU1 332 aaPredicted RBP16.98■□□□□ 0.31
CDCA4P1-201ENST00000442667 FHAD1B1AJZ9 1412 aa16.97■□□□□ 0.31
CDCA4P1-201ENST00000442667 CSRNP3Q8WYN3 585 aa16.97■□□□□ 0.31
CDCA4P1-201ENST00000442667 OSCARQ8IYS5 282 aa16.96■□□□□ 0.31
CDCA4P1-201ENST00000442667 CARMIL1Q5VZK9 1371 aa16.96■□□□□ 0.31
CDCA4P1-201ENST00000442667 SYNJ2O15056 1496 aa16.96■□□□□ 0.31
CDCA4P1-201ENST00000442667 EEA1Q15075 1411 aa16.94■□□□□ 0.3
CDCA4P1-201ENST00000442667 PBRM1Q86U86 1689 aa16.92■□□□□ 0.3
CDCA4P1-201ENST00000442667 ADAMTS12P58397 1594 aa16.9■□□□□ 0.3
CDCA4P1-201ENST00000442667 GRIN2AQ12879 1464 aa16.87■□□□□ 0.29
CDCA4P1-201ENST00000442667 PRXQ9BXM0 1461 aa16.86■□□□□ 0.29
CDCA4P1-201ENST00000442667 RAPGEF2Q9Y4G8 1499 aa16.83■□□□□ 0.28
CDCA4P1-201ENST00000442667 CUL7Q14999 1698 aa16.82■□□□□ 0.28
CDCA4P1-201ENST00000442667 DNAJC5Q9H3Z4 198 aa16.82■□□□□ 0.28
CDCA4P1-201ENST00000442667 NUP160Q12769 1436 aa16.81■□□□□ 0.28
CDCA4P1-201ENST00000442667 CHD1O14646 1710 aa16.79■□□□□ 0.28
CDCA4P1-201ENST00000442667 CEP170Q5SW79 1584 aa16.74■□□□□ 0.27
CDCA4P1-201ENST00000442667 EHMT2Q96KQ7 1210 aa16.74■□□□□ 0.27
CDCA4P1-201ENST00000442667 CLASP1Q7Z460 1538 aa16.72■□□□□ 0.27
CDCA4P1-201ENST00000442667 KIAA0586Q9BVV6 1533 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 178.4 ms