RNA–Protein interactions for RNA: ENST00000440639.2

HELQ-202, Transcript of helicase, POLQ like, humanhuman

TSL 1 (best)

Gene HELQ, Length 744 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HELQ-202ENST00000440639 NISCHQ9Y2I1 1504 aa28.1■■■□□ 2.09
HELQ-202ENST00000440639 CCDC180Q9P1Z9 1646 aa24.91■■□□□ 1.58
HELQ-202ENST00000440639 ABCC9O60706 1549 aa23.92■■□□□ 1.42
HELQ-202ENST00000440639 ZCCHC6Q5VYS8 1495 aaKnown RBP23.49■■□□□ 1.35
HELQ-202ENST00000440639 MYO15BQ96JP2 1530 aa23.44■■□□□ 1.34
HELQ-202ENST00000440639 DCAF1Q9Y4B6 1507 aa23.4■■□□□ 1.34
HELQ-202ENST00000440639 NACADO15069 1562 aa23.37■■□□□ 1.33
HELQ-202ENST00000440639 RB1CC1Q8TDY2 1594 aa23.28■■□□□ 1.32
HELQ-202ENST00000440639 DCAF8L2P0C7V8 631 aa23.11■■□□□ 1.29
HELQ-202ENST00000440639 UNC13AQ9UPW8 1703 aa22.62■■□□□ 1.21
HELQ-202ENST00000440639 SCRIBQ14160 1630 aa22.57■■□□□ 1.2
HELQ-202ENST00000440639 SHROOM4Q9ULL8 1493 aa22.54■■□□□ 1.2
HELQ-202ENST00000440639 BICRAQ9NZM4 1560 aa22.52■■□□□ 1.2
HELQ-202ENST00000440639 DNAJC5BQ9UF47 199 aa22.42■■□□□ 1.18
HELQ-202ENST00000440639 PABPN1Q86U42 306 aaKnown RBP eCLIP22.35■■□□□ 1.17
HELQ-202ENST00000440639 AEBP2Q6ZN18 517 aaPredicted RBP21.96■■□□□ 1.11
HELQ-202ENST00000440639 EIF4G1Q04637 1599 aaKnown RBP21.91■■□□□ 1.1
HELQ-202ENST00000440639 BAZ1AQ9NRL2 1556 aaPredicted RBP21.78■■□□□ 1.08
HELQ-202ENST00000440639 CECR2Q9BXF3 1484 aa21.76■■□□□ 1.07
HELQ-202ENST00000440639 SMARCA4P51532 1647 aa21.72■■□□□ 1.07
HELQ-202ENST00000440639 CC2D2AQ9P2K1 1620 aa21.71■■□□□ 1.07
HELQ-202ENST00000440639 PEG3Q9GZU2 1588 aa21.62■■□□□ 1.05
HELQ-202ENST00000440639 SMARCA2P51531 1590 aa21.59■■□□□ 1.05
HELQ-202ENST00000440639 MROH2BQ7Z745 1585 aa21.58■■□□□ 1.05
HELQ-202ENST00000440639 NCAPD3P42695 1498 aa21.57■■□□□ 1.04
HELQ-202ENST00000440639 ATAD2BQ9ULI0 1458 aa21.56■■□□□ 1.04
HELQ-202ENST00000440639 RSF1Q96T23 1441 aaPredicted RBP21.49■■□□□ 1.03
HELQ-202ENST00000440639 HMGXB3Q12766 1538 aa21.49■■□□□ 1.03
HELQ-202ENST00000440639 BAZ1BQ9UIG0 1483 aaKnown RBP21.37■■□□□ 1.01
HELQ-202ENST00000440639 WIZO95785 1651 aa21.31■■□□□ 1
HELQ-202ENST00000440639 TOP2AP11388 1531 aaKnown RBP21.23■□□□□ 0.99
HELQ-202ENST00000440639 SUPT5HO00267 1087 aaKnown RBP20.96■□□□□ 0.95
HELQ-202ENST00000440639 CCDC88BA6NC98 1476 aa20.93■□□□□ 0.94
HELQ-202ENST00000440639 LAMC3Q9Y6N6 1575 aa20.92■□□□□ 0.94
HELQ-202ENST00000440639 CADPSQ9ULU8 1353 aa20.9■□□□□ 0.94
HELQ-202ENST00000440639 CFTRP13569 1480 aa20.87■□□□□ 0.93
HELQ-202ENST00000440639 DNAJC5Q9H3Z4 198 aa20.86■□□□□ 0.93
HELQ-202ENST00000440639 PDS5BQ9NTI5 1447 aa20.78■□□□□ 0.92
HELQ-202ENST00000440639 NESP48681 1621 aa20.77■□□□□ 0.92
HELQ-202ENST00000440639 PRDM2Q13029 1718 aa20.67■□□□□ 0.9
HELQ-202ENST00000440639 ERCC6Q03468 1493 aa20.64■□□□□ 0.89
HELQ-202ENST00000440639 FANCD2Q9BXW9 1451 aa20.62■□□□□ 0.89
HELQ-202ENST00000440639 CEP164Q9UPV0 1460 aa20.58■□□□□ 0.89
HELQ-202ENST00000440639 KIF21AQ7Z4S6 1674 aa20.55■□□□□ 0.88
HELQ-202ENST00000440639 MRC2Q9UBG0 1479 aa20.5■□□□□ 0.87
HELQ-202ENST00000440639 THOC2Q8NI27 1593 aaKnown RBP20.5■□□□□ 0.87
HELQ-202ENST00000440639 WDR62O43379 1518 aa20.46■□□□□ 0.87
HELQ-202ENST00000440639 ABCC8Q09428 1581 aa20.46■□□□□ 0.87
HELQ-202ENST00000440639 CUX2O14529 1486 aa20.45■□□□□ 0.86
HELQ-202ENST00000440639 CHIC1Q5VXU3 224 aa20.42■□□□□ 0.86
HELQ-202ENST00000440639 URB2Q14146 1524 aaKnown RBP20.37■□□□□ 0.85
HELQ-202ENST00000440639 DNMBPQ6XZF7 1577 aa20.35■□□□□ 0.85
HELQ-202ENST00000440639 TOPBP1Q92547 1522 aa20.32■□□□□ 0.84
HELQ-202ENST00000440639 CUX1P39880 1505 aa20.25■□□□□ 0.83
HELQ-202ENST00000440639 WRNQ14191 1432 aaPredicted RBP eCLIP20.25■□□□□ 0.83
HELQ-202ENST00000440639 TOP2BQ02880 1626 aa20.2■□□□□ 0.82
HELQ-202ENST00000440639 BIVM-ERCC5R4GMW8 1640 aa20.19■□□□□ 0.82
HELQ-202ENST00000440639 POLA1P09884 1462 aaPredicted RBP20.18■□□□□ 0.82
HELQ-202ENST00000440639 IFT140Q96RY7 1462 aa20.18■□□□□ 0.82
HELQ-202ENST00000440639 SYNJ1O43426 1573 aa20.13■□□□□ 0.81
HELQ-202ENST00000440639 FGD5Q6ZNL6 1462 aa20.13■□□□□ 0.81
HELQ-202ENST00000440639 WDR97A6NE52 1622 aa20.09■□□□□ 0.81
HELQ-202ENST00000440639 TARBP1Q13395 1621 aaKnown RBP20.09■□□□□ 0.81
HELQ-202ENST00000440639 SOGA1O94964 1423 aa20.08■□□□□ 0.8
HELQ-202ENST00000440639 ABCA10Q8WWZ4 1543 aa20.03■□□□□ 0.8
HELQ-202ENST00000440639 RAD54L2Q9Y4B4 1467 aa20■□□□□ 0.79
HELQ-202ENST00000440639 ZNF608Q9ULD9 1512 aaPredicted RBP19.95■□□□□ 0.78
HELQ-202ENST00000440639 EIF4G3O43432 1585 aaKnown RBP19.92■□□□□ 0.78
HELQ-202ENST00000440639 ABCA5Q8WWZ7 1642 aa19.9■□□□□ 0.78
HELQ-202ENST00000440639 TRIM41Q8WV44 630 aa19.89■□□□□ 0.77
HELQ-202ENST00000440639 GAPVD1Q14C86 1478 aa19.87■□□□□ 0.77
HELQ-202ENST00000440639 TDRD9Q8NDG6 1382 aaKnown RBP19.87■□□□□ 0.77
HELQ-202ENST00000440639 AQRO60306 1485 aaKnown RBP eCLIP19.86■□□□□ 0.77
HELQ-202ENST00000440639 GRIN2BQ13224 1484 aa19.86■□□□□ 0.77
HELQ-202ENST00000440639 KIF27Q86VH2 1401 aa19.84■□□□□ 0.77
HELQ-202ENST00000440639 ERICH3Q5RHP9 1530 aa19.81■□□□□ 0.76
HELQ-202ENST00000440639 MAGI1Q96QZ7 1491 aaPredicted RBP19.81■□□□□ 0.76
HELQ-202ENST00000440639 PBRM1Q86U86 1689 aa19.75■□□□□ 0.75
HELQ-202ENST00000440639 SNAPC4Q5SXM2 1469 aa19.73■□□□□ 0.75
HELQ-202ENST00000440639 EEA1Q15075 1411 aa19.72■□□□□ 0.75
HELQ-202ENST00000440639 SYNJ2O15056 1496 aa19.71■□□□□ 0.75
HELQ-202ENST00000440639 IGF1RP08069 1367 aa19.7■□□□□ 0.74
HELQ-202ENST00000440639 FHAD1B1AJZ9 1412 aa19.68■□□□□ 0.74
HELQ-202ENST00000440639 ADAMTS12P58397 1594 aa19.67■□□□□ 0.74
HELQ-202ENST00000440639 CUL7Q14999 1698 aa19.66■□□□□ 0.74
HELQ-202ENST00000440639 CHMP7Q8WUX9 453 aaPredicted RBP19.59■□□□□ 0.73
HELQ-202ENST00000440639 RUSC2Q8N2Y8 1516 aa19.58■□□□□ 0.73
HELQ-202ENST00000440639 GRIN2AQ12879 1464 aa19.58■□□□□ 0.72
HELQ-202ENST00000440639 CARMIL1Q5VZK9 1371 aa19.57■□□□□ 0.72
HELQ-202ENST00000440639 OSCARQ8IYS5 282 aa19.57■□□□□ 0.72
HELQ-202ENST00000440639 CHD1O14646 1710 aa19.56■□□□□ 0.72
HELQ-202ENST00000440639 PRXQ9BXM0 1461 aa19.54■□□□□ 0.72
HELQ-202ENST00000440639 NUP160Q12769 1436 aa19.53■□□□□ 0.72
HELQ-202ENST00000440639 CSRNP3Q8WYN3 585 aa19.52■□□□□ 0.72
HELQ-202ENST00000440639 RAPGEF2Q9Y4G8 1499 aa19.51■□□□□ 0.71
HELQ-202ENST00000440639 FBLN2P98095 1184 aa19.5■□□□□ 0.71
HELQ-202ENST00000440639 CLASP1Q7Z460 1538 aa19.46■□□□□ 0.71
HELQ-202ENST00000440639 CEP170Q5SW79 1584 aa19.42■□□□□ 0.7
HELQ-202ENST00000440639 KIF21BO75037 1637 aa19.42■□□□□ 0.7
HELQ-202ENST00000440639 KIAA0586Q9BVV6 1533 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms