RNA–Protein interactions for RNA: ENST00000440472.6

SPIRE1-204, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 1 (best)

Gene SPIRE1, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-204ENST00000440472 NISCHQ9Y2I1 1504 aa17.8■□□□□ 0.44
SPIRE1-204ENST00000440472 CCDC180Q9P1Z9 1646 aa15.4■□□□□ 0.06
SPIRE1-204ENST00000440472 ZCCHC6Q5VYS8 1495 aaKnown RBP15.05■□□□□ -0
SPIRE1-204ENST00000440472 DCAF1Q9Y4B6 1507 aa14.83□□□□□ -0.03
SPIRE1-204ENST00000440472 SHROOM4Q9ULL8 1493 aa14.56□□□□□ -0.08
SPIRE1-204ENST00000440472 MYO15BQ96JP2 1530 aa14.54□□□□□ -0.08
SPIRE1-204ENST00000440472 DCAF8L2P0C7V8 631 aa14.33□□□□□ -0.11
SPIRE1-204ENST00000440472 NACADO15069 1562 aa14.25□□□□□ -0.13
SPIRE1-204ENST00000440472 SUPT5HO00267 1087 aaKnown RBP14.21□□□□□ -0.13
SPIRE1-204ENST00000440472 ABCC9O60706 1549 aa14.14□□□□□ -0.15
SPIRE1-204ENST00000440472 SCRIBQ14160 1630 aa14.06□□□□□ -0.16
SPIRE1-204ENST00000440472 DNAJC5Q9H3Z4 198 aa14.03□□□□□ -0.16
SPIRE1-204ENST00000440472 RB1CC1Q8TDY2 1594 aa13.99□□□□□ -0.17
SPIRE1-204ENST00000440472 DNAJC5BQ9UF47 199 aa13.96□□□□□ -0.18
SPIRE1-204ENST00000440472 RSF1Q96T23 1441 aaPredicted RBP13.93□□□□□ -0.18
SPIRE1-204ENST00000440472 CHIC1Q5VXU3 224 aa13.93□□□□□ -0.18
SPIRE1-204ENST00000440472 CECR2Q9BXF3 1484 aa13.73□□□□□ -0.21
SPIRE1-204ENST00000440472 MROH2BQ7Z745 1585 aa13.72□□□□□ -0.21
SPIRE1-204ENST00000440472 BAZ1AQ9NRL2 1556 aaPredicted RBP13.72□□□□□ -0.21
SPIRE1-204ENST00000440472 UNC13AQ9UPW8 1703 aa13.69□□□□□ -0.22
SPIRE1-204ENST00000440472 WIZO95785 1651 aa13.61□□□□□ -0.23
SPIRE1-204ENST00000440472 SMARCA4P51532 1647 aa13.59□□□□□ -0.23
SPIRE1-204ENST00000440472 BICRAQ9NZM4 1560 aa13.56□□□□□ -0.24
SPIRE1-204ENST00000440472 TOP2AP11388 1531 aaKnown RBP13.54□□□□□ -0.24
SPIRE1-204ENST00000440472 EIF4G1Q04637 1599 aaKnown RBP13.5□□□□□ -0.25
SPIRE1-204ENST00000440472 PEG3Q9GZU2 1588 aa13.49□□□□□ -0.25
SPIRE1-204ENST00000440472 TRIM41Q8WV44 630 aa13.42□□□□□ -0.26
SPIRE1-204ENST00000440472 SMARCA2P51531 1590 aa13.41□□□□□ -0.26
SPIRE1-204ENST00000440472 CCDC88BA6NC98 1476 aa13.38□□□□□ -0.27
SPIRE1-204ENST00000440472 LOC105371045A0A1W2PR82 267 aa13.31□□□□□ -0.28
SPIRE1-204ENST00000440472 PABPN1Q86U42 306 aaKnown RBP eCLIP13.28□□□□□ -0.28
SPIRE1-204ENST00000440472 ATAD2BQ9ULI0 1458 aa13.28□□□□□ -0.28
SPIRE1-204ENST00000440472 EEA1Q15075 1411 aa13.19□□□□□ -0.3
SPIRE1-204ENST00000440472 BAZ1BQ9UIG0 1483 aaKnown RBP13.19□□□□□ -0.3
SPIRE1-204ENST00000440472 HMGXB3Q12766 1538 aa13.16□□□□□ -0.3
SPIRE1-204ENST00000440472 NCAPD3P42695 1498 aa13.14□□□□□ -0.31
SPIRE1-204ENST00000440472 ABCC8Q09428 1581 aa13.14□□□□□ -0.31
SPIRE1-204ENST00000440472 HRCP23327 699 aa13.13□□□□□ -0.31
SPIRE1-204ENST00000440472 TRIM26Q12899 539 aaPredicted RBP13.11□□□□□ -0.31
SPIRE1-204ENST00000440472 PCGF6Q9BYE7 350 aa13.09□□□□□ -0.31
SPIRE1-204ENST00000440472 WRNQ14191 1432 aaPredicted RBP eCLIP13.08□□□□□ -0.32
SPIRE1-204ENST00000440472 FAM9AQ8IZU1 332 aaPredicted RBP13.06□□□□□ -0.32
SPIRE1-204ENST00000440472 TNIKQ9UKE5 1360 aa13.01□□□□□ -0.33
SPIRE1-204ENST00000440472 SYNJ1O43426 1573 aa13□□□□□ -0.33
SPIRE1-204ENST00000440472 SOGA1O94964 1423 aa13□□□□□ -0.33
SPIRE1-204ENST00000440472 CSRNP3Q8WYN3 585 aa12.98□□□□□ -0.33
SPIRE1-204ENST00000440472 TOP2BQ02880 1626 aa12.97□□□□□ -0.33
SPIRE1-204ENST00000440472 BIVM-ERCC5R4GMW8 1640 aa12.97□□□□□ -0.33
SPIRE1-204ENST00000440472 KIF21BO75037 1637 aa12.97□□□□□ -0.33
SPIRE1-204ENST00000440472 GOLGA3Q08378 1498 aa12.95□□□□□ -0.34
SPIRE1-204ENST00000440472 CFTRP13569 1480 aa12.94□□□□□ -0.34
SPIRE1-204ENST00000440472 CEP164Q9UPV0 1460 aa12.92□□□□□ -0.34
SPIRE1-204ENST00000440472 PRDM2Q13029 1718 aa12.91□□□□□ -0.34
SPIRE1-204ENST00000440472 RUSC2Q8N2Y8 1516 aa12.91□□□□□ -0.34
SPIRE1-204ENST00000440472 CEP162Q5TB80 1403 aa12.9□□□□□ -0.34
SPIRE1-204ENST00000440472 ZEB1P37275 1124 aaPredicted RBP12.85□□□□□ -0.35
SPIRE1-204ENST00000440472 ERICH3Q5RHP9 1530 aa12.82□□□□□ -0.36
SPIRE1-204ENST00000440472 CUX1P39880 1505 aa12.81□□□□□ -0.36
SPIRE1-204ENST00000440472 CADPSQ9ULU8 1353 aa12.79□□□□□ -0.36
SPIRE1-204ENST00000440472 CC2D2AQ9P2K1 1620 aa12.79□□□□□ -0.36
SPIRE1-204ENST00000440472 PRXQ9BXM0 1461 aa12.78□□□□□ -0.36
SPIRE1-204ENST00000440472 UBTFP17480 764 aaKnown RBP12.76□□□□□ -0.37
SPIRE1-204ENST00000440472 EHMT2Q96KQ7 1210 aa12.76□□□□□ -0.37
SPIRE1-204ENST00000440472 KIF27Q86VH2 1401 aa12.73□□□□□ -0.37
SPIRE1-204ENST00000440472 RAPGEF2Q9Y4G8 1499 aa12.73□□□□□ -0.37
SPIRE1-204ENST00000440472 CLIP1P30622 1438 aa12.72□□□□□ -0.37
SPIRE1-204ENST00000440472 VPS8Q8N3P4 1428 aa12.7□□□□□ -0.38
SPIRE1-204ENST00000440472 DNMBPQ6XZF7 1577 aa12.62□□□□□ -0.39
SPIRE1-204ENST00000440472 LAMC3Q9Y6N6 1575 aa12.62□□□□□ -0.39
SPIRE1-204ENST00000440472 FANCD2Q9BXW9 1451 aa12.62□□□□□ -0.39
SPIRE1-204ENST00000440472 PPARGC1BQ86YN6 1023 aaKnown RBP12.61□□□□□ -0.39
SPIRE1-204ENST00000440472 FGD5Q6ZNL6 1462 aa12.59□□□□□ -0.39
SPIRE1-204ENST00000440472 IGF1RP08069 1367 aa12.59□□□□□ -0.39
SPIRE1-204ENST00000440472 CUX2O14529 1486 aa12.57□□□□□ -0.4
SPIRE1-204ENST00000440472 ARAP1Q96P48 1450 aa12.57□□□□□ -0.4
SPIRE1-204ENST00000440472 ABCA10Q8WWZ4 1543 aa12.56□□□□□ -0.4
SPIRE1-204ENST00000440472 AEBP2Q6ZN18 517 aaPredicted RBP12.55□□□□□ -0.4
SPIRE1-204ENST00000440472 TOPBP1Q92547 1522 aa12.54□□□□□ -0.4
SPIRE1-204ENST00000440472 CARMIL1Q5VZK9 1371 aa12.51□□□□□ -0.41
SPIRE1-204ENST00000440472 MAP3K1Q13233 1512 aa12.51□□□□□ -0.41
SPIRE1-204ENST00000440472 POLA1P09884 1462 aaPredicted RBP12.5□□□□□ -0.41
SPIRE1-204ENST00000440472 ARHGAP35Q9NRY4 1499 aa12.5□□□□□ -0.41
SPIRE1-204ENST00000440472 APLP2Q06481 763 aa12.5□□□□□ -0.41
SPIRE1-204ENST00000440472 CUL7Q14999 1698 aa12.49□□□□□ -0.41
SPIRE1-204ENST00000440472 PDS5BQ9NTI5 1447 aa12.49□□□□□ -0.41
SPIRE1-204ENST00000440472 WDR97A6NE52 1622 aa12.48□□□□□ -0.41
SPIRE1-204ENST00000440472 NESP48681 1621 aa12.46□□□□□ -0.41
SPIRE1-204ENST00000440472 CCER1Q8TC90 406 aaPredicted RBP12.44□□□□□ -0.42
SPIRE1-204ENST00000440472 URB2Q14146 1524 aaKnown RBP12.44□□□□□ -0.42
SPIRE1-204ENST00000440472 EFCAB5A4FU69 1503 aa12.42□□□□□ -0.42
SPIRE1-204ENST00000440472 RRBP1Q9P2E9 1410 aaKnown RBP12.42□□□□□ -0.42
SPIRE1-204ENST00000440472 ABCA5Q8WWZ7 1642 aa12.41□□□□□ -0.42
SPIRE1-204ENST00000440472 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.41□□□□□ -0.42
SPIRE1-204ENST00000440472 RAD54L2Q9Y4B4 1467 aa12.41□□□□□ -0.42
SPIRE1-204ENST00000440472 FHAD1B1AJZ9 1412 aa12.4□□□□□ -0.43
SPIRE1-204ENST00000440472 AQRO60306 1485 aaKnown RBP eCLIP12.38□□□□□ -0.43
SPIRE1-204ENST00000440472 CTTNBP2Q8WZ74 1663 aa12.37□□□□□ -0.43
SPIRE1-204ENST00000440472 TIAM1Q13009 1591 aa12.36□□□□□ -0.43
SPIRE1-204ENST00000440472 CLSPNQ9HAW4 1339 aa12.36□□□□□ -0.43
SPIRE1-204ENST00000440472 KIF21AQ7Z4S6 1674 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms