RNA–Protein interactions for RNA: ENST00000439467.6

CACNB4-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 5 BASIC

Gene CACNB4, Length 2,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-206ENST00000439467 NISCHQ9Y2I1 1504 aa23.19■■□□□ 1.3
CACNB4-206ENST00000439467 CCDC180Q9P1Z9 1646 aa19.92■□□□□ 0.78
CACNB4-206ENST00000439467 ZCCHC6Q5VYS8 1495 aaKnown RBP19.53■□□□□ 0.72
CACNB4-206ENST00000439467 SHROOM4Q9ULL8 1493 aa19.39■□□□□ 0.69
CACNB4-206ENST00000439467 DCAF8L2P0C7V8 631 aa19.3■□□□□ 0.68
CACNB4-206ENST00000439467 DCAF1Q9Y4B6 1507 aa19.06■□□□□ 0.64
CACNB4-206ENST00000439467 SUPT5HO00267 1087 aaKnown RBP18.81■□□□□ 0.6
CACNB4-206ENST00000439467 ABCC9O60706 1549 aa18.81■□□□□ 0.6
CACNB4-206ENST00000439467 MYO15BQ96JP2 1530 aa18.69■□□□□ 0.58
CACNB4-206ENST00000439467 SCRIBQ14160 1630 aa18.56■□□□□ 0.56
CACNB4-206ENST00000439467 NACADO15069 1562 aa18.54■□□□□ 0.56
CACNB4-206ENST00000439467 RB1CC1Q8TDY2 1594 aa18.32■□□□□ 0.52
CACNB4-206ENST00000439467 RSF1Q96T23 1441 aaPredicted RBP18.18■□□□□ 0.5
CACNB4-206ENST00000439467 CHIC1Q5VXU3 224 aa18.1■□□□□ 0.49
CACNB4-206ENST00000439467 CECR2Q9BXF3 1484 aa18.1■□□□□ 0.49
CACNB4-206ENST00000439467 MROH2BQ7Z745 1585 aa17.99■□□□□ 0.47
CACNB4-206ENST00000439467 UNC13AQ9UPW8 1703 aa17.97■□□□□ 0.47
CACNB4-206ENST00000439467 PABPN1Q86U42 306 aaKnown RBP eCLIP17.9■□□□□ 0.46
CACNB4-206ENST00000439467 WIZO95785 1651 aa17.84■□□□□ 0.45
CACNB4-206ENST00000439467 BAZ1AQ9NRL2 1556 aaPredicted RBP17.84■□□□□ 0.45
CACNB4-206ENST00000439467 BICRAQ9NZM4 1560 aa17.82■□□□□ 0.44
CACNB4-206ENST00000439467 SMARCA4P51532 1647 aa17.74■□□□□ 0.43
CACNB4-206ENST00000439467 TOP2AP11388 1531 aaKnown RBP17.59■□□□□ 0.41
CACNB4-206ENST00000439467 TRIM41Q8WV44 630 aa17.58■□□□□ 0.4
CACNB4-206ENST00000439467 LOC105371045A0A1W2PR82 267 aa17.52■□□□□ 0.4
CACNB4-206ENST00000439467 CCDC88BA6NC98 1476 aa17.51■□□□□ 0.39
CACNB4-206ENST00000439467 SMARCA2P51531 1590 aa17.47■□□□□ 0.39
CACNB4-206ENST00000439467 PEG3Q9GZU2 1588 aa17.44■□□□□ 0.38
CACNB4-206ENST00000439467 EIF4G1Q04637 1599 aaKnown RBP17.43■□□□□ 0.38
CACNB4-206ENST00000439467 ATAD2BQ9ULI0 1458 aa17.41■□□□□ 0.38
CACNB4-206ENST00000439467 FAM9AQ8IZU1 332 aaPredicted RBP17.39■□□□□ 0.37
CACNB4-206ENST00000439467 BAZ1BQ9UIG0 1483 aaKnown RBP17.33■□□□□ 0.36
CACNB4-206ENST00000439467 ABCC8Q09428 1581 aa17.28■□□□□ 0.36
CACNB4-206ENST00000439467 EHMT2Q96KQ7 1210 aa17.22■□□□□ 0.35
CACNB4-206ENST00000439467 NCAPD3P42695 1498 aa17.16■□□□□ 0.34
CACNB4-206ENST00000439467 HMGXB3Q12766 1538 aa17.11■□□□□ 0.33
CACNB4-206ENST00000439467 WRNQ14191 1432 aaPredicted RBP eCLIP17.09■□□□□ 0.33
CACNB4-206ENST00000439467 SOGA1O94964 1423 aa17.05■□□□□ 0.32
CACNB4-206ENST00000439467 PCGF6Q9BYE7 350 aa17.05■□□□□ 0.32
CACNB4-206ENST00000439467 SYNJ1O43426 1573 aa16.99■□□□□ 0.31
CACNB4-206ENST00000439467 RUSC2Q8N2Y8 1516 aa16.98■□□□□ 0.31
CACNB4-206ENST00000439467 CC2D2AQ9P2K1 1620 aa16.94■□□□□ 0.3
CACNB4-206ENST00000439467 CSRNP3Q8WYN3 585 aa16.94■□□□□ 0.3
CACNB4-206ENST00000439467 EEA1Q15075 1411 aa16.92■□□□□ 0.3
CACNB4-206ENST00000439467 CFTRP13569 1480 aa16.89■□□□□ 0.3
CACNB4-206ENST00000439467 TRIM26Q12899 539 aaPredicted RBP16.85■□□□□ 0.29
CACNB4-206ENST00000439467 TOP2BQ02880 1626 aa16.84■□□□□ 0.29
CACNB4-206ENST00000439467 UBTFP17480 764 aaKnown RBP16.81■□□□□ 0.28
CACNB4-206ENST00000439467 CADPSQ9ULU8 1353 aa16.8■□□□□ 0.28
CACNB4-206ENST00000439467 TNIKQ9UKE5 1360 aa16.79■□□□□ 0.28
CACNB4-206ENST00000439467 CUX1P39880 1505 aa16.78■□□□□ 0.28
CACNB4-206ENST00000439467 BIVM-ERCC5R4GMW8 1640 aa16.78■□□□□ 0.28
CACNB4-206ENST00000439467 CEP162Q5TB80 1403 aa16.77■□□□□ 0.27
CACNB4-206ENST00000439467 GOLGA3Q08378 1498 aa16.77■□□□□ 0.27
CACNB4-206ENST00000439467 HRCP23327 699 aa16.74■□□□□ 0.27
CACNB4-206ENST00000439467 PPARGC1BQ86YN6 1023 aaKnown RBP16.74■□□□□ 0.27
CACNB4-206ENST00000439467 CEP164Q9UPV0 1460 aa16.73■□□□□ 0.27
CACNB4-206ENST00000439467 KIF21BO75037 1637 aa16.69■□□□□ 0.26
CACNB4-206ENST00000439467 PRDM2Q13029 1718 aa16.67■□□□□ 0.26
CACNB4-206ENST00000439467 RAPGEF2Q9Y4G8 1499 aa16.66■□□□□ 0.26
CACNB4-206ENST00000439467 DNAJC5BQ9UF47 199 aa16.64■□□□□ 0.25
CACNB4-206ENST00000439467 NESP48681 1621 aa16.62■□□□□ 0.25
CACNB4-206ENST00000439467 FANCD2Q9BXW9 1451 aa16.62■□□□□ 0.25
CACNB4-206ENST00000439467 KIF27Q86VH2 1401 aa16.61■□□□□ 0.25
CACNB4-206ENST00000439467 PRXQ9BXM0 1461 aa16.57■□□□□ 0.24
CACNB4-206ENST00000439467 RANGAP1P46060 587 aaPredicted RBP16.56■□□□□ 0.24
CACNB4-206ENST00000439467 CLIP1P30622 1438 aa16.55■□□□□ 0.24
CACNB4-206ENST00000439467 TTBK1Q5TCY1 1321 aaPredicted RBP16.55■□□□□ 0.24
CACNB4-206ENST00000439467 FGD5Q6ZNL6 1462 aa16.55■□□□□ 0.24
CACNB4-206ENST00000439467 CUX2O14529 1486 aa16.53■□□□□ 0.24
CACNB4-206ENST00000439467 ERICH3Q5RHP9 1530 aa16.51■□□□□ 0.23
CACNB4-206ENST00000439467 LAMC3Q9Y6N6 1575 aa16.48■□□□□ 0.23
CACNB4-206ENST00000439467 IGF1RP08069 1367 aa16.48■□□□□ 0.23
CACNB4-206ENST00000439467 DNMBPQ6XZF7 1577 aa16.46■□□□□ 0.23
CACNB4-206ENST00000439467 TOPBP1Q92547 1522 aa16.46■□□□□ 0.23
CACNB4-206ENST00000439467 RAD54L2Q9Y4B4 1467 aa16.44■□□□□ 0.22
CACNB4-206ENST00000439467 VPS8Q8N3P4 1428 aa16.43■□□□□ 0.22
CACNB4-206ENST00000439467 POLA1P09884 1462 aaPredicted RBP16.42■□□□□ 0.22
CACNB4-206ENST00000439467 PDS5BQ9NTI5 1447 aa16.41■□□□□ 0.22
CACNB4-206ENST00000439467 URB2Q14146 1524 aaKnown RBP16.4■□□□□ 0.22
CACNB4-206ENST00000439467 CARMIL1Q5VZK9 1371 aa16.39■□□□□ 0.21
CACNB4-206ENST00000439467 ABCA10Q8WWZ4 1543 aa16.36■□□□□ 0.21
CACNB4-206ENST00000439467 ARAP1Q96P48 1450 aa16.34■□□□□ 0.21
CACNB4-206ENST00000439467 APLP2Q06481 763 aa16.33■□□□□ 0.2
CACNB4-206ENST00000439467 KIF21AQ7Z4S6 1674 aa16.31■□□□□ 0.2
CACNB4-206ENST00000439467 ARHGAP35Q9NRY4 1499 aa16.28■□□□□ 0.2
CACNB4-206ENST00000439467 ZEB1P37275 1124 aaPredicted RBP16.28■□□□□ 0.2
CACNB4-206ENST00000439467 TDRD9Q8NDG6 1382 aaKnown RBP16.27■□□□□ 0.19
CACNB4-206ENST00000439467 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.26■□□□□ 0.19
CACNB4-206ENST00000439467 WDR97A6NE52 1622 aa16.22■□□□□ 0.19
CACNB4-206ENST00000439467 GAPVD1Q14C86 1478 aa16.19■□□□□ 0.18
CACNB4-206ENST00000439467 KANK4Q5T7N3 995 aaPredicted RBP16.19■□□□□ 0.18
CACNB4-206ENST00000439467 CCER1Q8TC90 406 aaPredicted RBP16.19■□□□□ 0.18
CACNB4-206ENST00000439467 MRC2Q9UBG0 1479 aa16.17■□□□□ 0.18
CACNB4-206ENST00000439467 ABCA5Q8WWZ7 1642 aa16.17■□□□□ 0.18
CACNB4-206ENST00000439467 CUL7Q14999 1698 aa16.17■□□□□ 0.18
CACNB4-206ENST00000439467 P3H3Q8IVL6 736 aa16.16■□□□□ 0.18
CACNB4-206ENST00000439467 HNRNPUL2Q1KMD3 747 aaKnown RBP16.15■□□□□ 0.18
CACNB4-206ENST00000439467 TARBP1Q13395 1621 aaKnown RBP16.14■□□□□ 0.17
CACNB4-206ENST00000439467 AQRO60306 1485 aaKnown RBP eCLIP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms