RNA–Protein interactions for RNA: ENST00000438763.6

HLA-DOB-206, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DOB, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-206ENST00000438763 NISCHQ9Y2I1 1504 aa28.42■■■□□ 2.14
HLA-DOB-206ENST00000438763 ABCC9O60706 1549 aa25.26■■□□□ 1.63
HLA-DOB-206ENST00000438763 CCDC180Q9P1Z9 1646 aa24.86■■□□□ 1.57
HLA-DOB-206ENST00000438763 DNAJC5BQ9UF47 199 aa24.34■■□□□ 1.49
HLA-DOB-206ENST00000438763 ZCCHC6Q5VYS8 1495 aaKnown RBP23.81■■□□□ 1.4
HLA-DOB-206ENST00000438763 RB1CC1Q8TDY2 1594 aa23.63■■□□□ 1.37
HLA-DOB-206ENST00000438763 DCAF1Q9Y4B6 1507 aa23.54■■□□□ 1.36
HLA-DOB-206ENST00000438763 DCAF8L2P0C7V8 631 aa23.52■■□□□ 1.36
HLA-DOB-206ENST00000438763 PABPN1Q86U42 306 aaKnown RBP eCLIP23.44■■□□□ 1.34
HLA-DOB-206ENST00000438763 MYO15BQ96JP2 1530 aa23.36■■□□□ 1.33
HLA-DOB-206ENST00000438763 NACADO15069 1562 aa23.29■■□□□ 1.32
HLA-DOB-206ENST00000438763 UNC13AQ9UPW8 1703 aa23.15■■□□□ 1.3
HLA-DOB-206ENST00000438763 BICRAQ9NZM4 1560 aa23.02■■□□□ 1.28
HLA-DOB-206ENST00000438763 SHROOM4Q9ULL8 1493 aa22.96■■□□□ 1.27
HLA-DOB-206ENST00000438763 CECR2Q9BXF3 1484 aa22.78■■□□□ 1.24
HLA-DOB-206ENST00000438763 SCRIBQ14160 1630 aa22.77■■□□□ 1.24
HLA-DOB-206ENST00000438763 DNAJC5Q9H3Z4 198 aa22.76■■□□□ 1.23
HLA-DOB-206ENST00000438763 CC2D2AQ9P2K1 1620 aa22.74■■□□□ 1.23
HLA-DOB-206ENST00000438763 EIF4G1Q04637 1599 aaKnown RBP22.5■■□□□ 1.19
HLA-DOB-206ENST00000438763 SUPT5HO00267 1087 aaKnown RBP22.03■■□□□ 1.12
HLA-DOB-206ENST00000438763 RSF1Q96T23 1441 aaPredicted RBP21.97■■□□□ 1.11
HLA-DOB-206ENST00000438763 BAZ1AQ9NRL2 1556 aaPredicted RBP21.96■■□□□ 1.11
HLA-DOB-206ENST00000438763 CUX2O14529 1486 aa21.94■■□□□ 1.1
HLA-DOB-206ENST00000438763 MROH2BQ7Z745 1585 aa21.92■■□□□ 1.1
HLA-DOB-206ENST00000438763 SMARCA4P51532 1647 aa21.86■■□□□ 1.09
HLA-DOB-206ENST00000438763 ERCC6Q03468 1493 aa21.82■■□□□ 1.08
HLA-DOB-206ENST00000438763 WIZO95785 1651 aa21.7■■□□□ 1.06
HLA-DOB-206ENST00000438763 PEG3Q9GZU2 1588 aa21.64■■□□□ 1.05
HLA-DOB-206ENST00000438763 ATAD2BQ9ULI0 1458 aa21.59■■□□□ 1.05
HLA-DOB-206ENST00000438763 TRIM41Q8WV44 630 aa21.58■■□□□ 1.04
HLA-DOB-206ENST00000438763 SMARCA2P51531 1590 aa21.57■■□□□ 1.04
HLA-DOB-206ENST00000438763 NCAPD3P42695 1498 aa21.52■■□□□ 1.04
HLA-DOB-206ENST00000438763 NESP48681 1621 aa21.51■■□□□ 1.03
HLA-DOB-206ENST00000438763 TOP2AP11388 1531 aaKnown RBP21.51■■□□□ 1.03
HLA-DOB-206ENST00000438763 BAZ1BQ9UIG0 1483 aaKnown RBP21.43■■□□□ 1.02
HLA-DOB-206ENST00000438763 HMGXB3Q12766 1538 aa21.38■■□□□ 1.01
HLA-DOB-206ENST00000438763 THOC2Q8NI27 1593 aaKnown RBP21.37■■□□□ 1.01
HLA-DOB-206ENST00000438763 CCDC88BA6NC98 1476 aa21.3■■□□□ 1
HLA-DOB-206ENST00000438763 KIF21AQ7Z4S6 1674 aa21.18■□□□□ 0.98
HLA-DOB-206ENST00000438763 LAMC3Q9Y6N6 1575 aa21.13■□□□□ 0.97
HLA-DOB-206ENST00000438763 PDS5BQ9NTI5 1447 aa21.05■□□□□ 0.96
HLA-DOB-206ENST00000438763 CHIC1Q5VXU3 224 aa21.03■□□□□ 0.96
HLA-DOB-206ENST00000438763 MRC2Q9UBG0 1479 aa20.94■□□□□ 0.94
HLA-DOB-206ENST00000438763 CFTRP13569 1480 aa20.91■□□□□ 0.94
HLA-DOB-206ENST00000438763 CADPSQ9ULU8 1353 aa20.89■□□□□ 0.94
HLA-DOB-206ENST00000438763 WDR62O43379 1518 aa20.89■□□□□ 0.94
HLA-DOB-206ENST00000438763 AEBP2Q6ZN18 517 aaPredicted RBP20.88■□□□□ 0.93
HLA-DOB-206ENST00000438763 OSCARQ8IYS5 282 aa20.86■□□□□ 0.93
HLA-DOB-206ENST00000438763 ABCC8Q09428 1581 aa20.72■□□□□ 0.91
HLA-DOB-206ENST00000438763 PRDM2Q13029 1718 aa20.71■□□□□ 0.91
HLA-DOB-206ENST00000438763 CEP164Q9UPV0 1460 aa20.71■□□□□ 0.91
HLA-DOB-206ENST00000438763 RIMBP3CA6NJZ7 1639 aa20.7■□□□□ 0.9
HLA-DOB-206ENST00000438763 RIMBP3BA6NNM3 1639 aa20.7■□□□□ 0.9
HLA-DOB-206ENST00000438763 RIMBP3Q9UFD9 1639 aa20.7■□□□□ 0.9
HLA-DOB-206ENST00000438763 WRNQ14191 1432 aaPredicted RBP eCLIP20.68■□□□□ 0.9
HLA-DOB-206ENST00000438763 FANCD2Q9BXW9 1451 aa20.65■□□□□ 0.9
HLA-DOB-206ENST00000438763 ARHGEF11O15085 1522 aa20.55■□□□□ 0.88
HLA-DOB-206ENST00000438763 SYNJ1O43426 1573 aa20.55■□□□□ 0.88
HLA-DOB-206ENST00000438763 URB2Q14146 1524 aaKnown RBP20.54■□□□□ 0.88
HLA-DOB-206ENST00000438763 TOP2BQ02880 1626 aa20.52■□□□□ 0.87
HLA-DOB-206ENST00000438763 CUX1P39880 1505 aa20.51■□□□□ 0.87
HLA-DOB-206ENST00000438763 BIVM-ERCC5R4GMW8 1640 aa20.5■□□□□ 0.87
HLA-DOB-206ENST00000438763 TRHP20396 242 aaPredicted RBP20.49■□□□□ 0.87
HLA-DOB-206ENST00000438763 CYB5RLQ6IPT4 315 aa20.49■□□□□ 0.87
HLA-DOB-206ENST00000438763 ZNF608Q9ULD9 1512 aaPredicted RBP20.43■□□□□ 0.86
HLA-DOB-206ENST00000438763 DNMBPQ6XZF7 1577 aa20.4■□□□□ 0.86
HLA-DOB-206ENST00000438763 TOPBP1Q92547 1522 aa20.37■□□□□ 0.85
HLA-DOB-206ENST00000438763 SOGA1O94964 1423 aa20.34■□□□□ 0.85
HLA-DOB-206ENST00000438763 ARAP1Q96P48 1450 aa20.33■□□□□ 0.84
HLA-DOB-206ENST00000438763 EEA1Q15075 1411 aa20.33■□□□□ 0.84
HLA-DOB-206ENST00000438763 FAM9AQ8IZU1 332 aaPredicted RBP20.33■□□□□ 0.84
HLA-DOB-206ENST00000438763 FGD5Q6ZNL6 1462 aa20.32■□□□□ 0.84
HLA-DOB-206ENST00000438763 IFT140Q96RY7 1462 aa20.31■□□□□ 0.84
HLA-DOB-206ENST00000438763 RUSC2Q8N2Y8 1516 aa20.26■□□□□ 0.83
HLA-DOB-206ENST00000438763 POLA1P09884 1462 aaPredicted RBP20.25■□□□□ 0.83
HLA-DOB-206ENST00000438763 EIF4G3O43432 1585 aaKnown RBP20.24■□□□□ 0.83
HLA-DOB-206ENST00000438763 CSRNP3Q8WYN3 585 aa20.23■□□□□ 0.83
HLA-DOB-206ENST00000438763 CHD1O14646 1710 aa20.23■□□□□ 0.83
HLA-DOB-206ENST00000438763 KIF27Q86VH2 1401 aa20.2■□□□□ 0.82
HLA-DOB-206ENST00000438763 LOC105371045A0A1W2PR82 267 aa20.18■□□□□ 0.82
HLA-DOB-206ENST00000438763 FBLN2P98095 1184 aa20.18■□□□□ 0.82
HLA-DOB-206ENST00000438763 RAD54L2Q9Y4B4 1467 aa20.17■□□□□ 0.82
HLA-DOB-206ENST00000438763 ABCA10Q8WWZ4 1543 aa20.16■□□□□ 0.82
HLA-DOB-206ENST00000438763 AQRO60306 1485 aaKnown RBP eCLIP20.15■□□□□ 0.82
HLA-DOB-206ENST00000438763 TARBP1Q13395 1621 aaKnown RBP20.07■□□□□ 0.8
HLA-DOB-206ENST00000438763 WDR97A6NE52 1622 aa20.05■□□□□ 0.8
HLA-DOB-206ENST00000438763 IGF1RP08069 1367 aa20.05■□□□□ 0.8
HLA-DOB-206ENST00000438763 TDRD9Q8NDG6 1382 aaKnown RBP20.02■□□□□ 0.79
HLA-DOB-206ENST00000438763 KIF21BO75037 1637 aa20.01■□□□□ 0.79
HLA-DOB-206ENST00000438763 PRXQ9BXM0 1461 aa20.01■□□□□ 0.79
HLA-DOB-206ENST00000438763 EHMT2Q96KQ7 1210 aa19.99■□□□□ 0.79
HLA-DOB-206ENST00000438763 GOLGA3Q08378 1498 aa19.99■□□□□ 0.79
HLA-DOB-206ENST00000438763 GAPVD1Q14C86 1478 aa19.98■□□□□ 0.79
HLA-DOB-206ENST00000438763 ABCA5Q8WWZ7 1642 aa19.98■□□□□ 0.79
HLA-DOB-206ENST00000438763 CLASP1Q7Z460 1538 aa19.96■□□□□ 0.79
HLA-DOB-206ENST00000438763 CARMIL1Q5VZK9 1371 aa19.94■□□□□ 0.78
HLA-DOB-206ENST00000438763 ERICH3Q5RHP9 1530 aa19.93■□□□□ 0.78
HLA-DOB-206ENST00000438763 TNIKQ9UKE5 1360 aa19.92■□□□□ 0.78
HLA-DOB-206ENST00000438763 RAPGEF2Q9Y4G8 1499 aa19.92■□□□□ 0.78
HLA-DOB-206ENST00000438763 UBTFP17480 764 aaKnown RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms