RNA–Protein interactions for RNA: ENST00000437654.5

IRF1-203, Transcript of interferon regulatory factor 1, humanhuman

TSL 3

Gene IRF1, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-203ENST00000437654 NISCHQ9Y2I1 1504 aa43.38■■■■■ 4.54
IRF1-203ENST00000437654 CCDC180Q9P1Z9 1646 aa38.38■■■■□ 3.73
IRF1-203ENST00000437654 ABCC9O60706 1549 aa37.12■■■■□ 3.53
IRF1-203ENST00000437654 ZCCHC6Q5VYS8 1495 aaKnown RBP36.19■■■■□ 3.38
IRF1-203ENST00000437654 DCAF8L2P0C7V8 631 aa36.08■■■■□ 3.37
IRF1-203ENST00000437654 NACADO15069 1562 aa36.06■■■■□ 3.36
IRF1-203ENST00000437654 MYO15BQ96JP2 1530 aa36.05■■■■□ 3.36
IRF1-203ENST00000437654 DCAF1Q9Y4B6 1507 aa36■■■■□ 3.35
IRF1-203ENST00000437654 RB1CC1Q8TDY2 1594 aa35.97■■■■□ 3.35
IRF1-203ENST00000437654 UNC13AQ9UPW8 1703 aa34.98■■■■□ 3.19
IRF1-203ENST00000437654 SCRIBQ14160 1630 aa34.93■■■■□ 3.18
IRF1-203ENST00000437654 PABPN1Q86U42 306 aaKnown RBP eCLIP34.79■■■■□ 3.16
IRF1-203ENST00000437654 BICRAQ9NZM4 1560 aa34.79■■■■□ 3.16
IRF1-203ENST00000437654 SHROOM4Q9ULL8 1493 aa34.65■■■■□ 3.14
IRF1-203ENST00000437654 EIF4G1Q04637 1599 aaKnown RBP33.87■■■■□ 3.01
IRF1-203ENST00000437654 DNAJC5BQ9UF47 199 aa33.77■■■■□ 3
IRF1-203ENST00000437654 CECR2Q9BXF3 1484 aa33.69■■■□□ 2.98
IRF1-203ENST00000437654 CC2D2AQ9P2K1 1620 aa33.61■■■□□ 2.97
IRF1-203ENST00000437654 BAZ1AQ9NRL2 1556 aaPredicted RBP33.61■■■□□ 2.97
IRF1-203ENST00000437654 SMARCA4P51532 1647 aa33.52■■■□□ 2.96
IRF1-203ENST00000437654 MROH2BQ7Z745 1585 aa33.38■■■□□ 2.93
IRF1-203ENST00000437654 ATAD2BQ9ULI0 1458 aa33.31■■■□□ 2.92
IRF1-203ENST00000437654 SMARCA2P51531 1590 aa33.31■■■□□ 2.92
IRF1-203ENST00000437654 NCAPD3P42695 1498 aa33.31■■■□□ 2.92
IRF1-203ENST00000437654 PEG3Q9GZU2 1588 aa33.28■■■□□ 2.92
IRF1-203ENST00000437654 RSF1Q96T23 1441 aaPredicted RBP33.2■■■□□ 2.91
IRF1-203ENST00000437654 HMGXB3Q12766 1538 aa33.11■■■□□ 2.89
IRF1-203ENST00000437654 BAZ1BQ9UIG0 1483 aaKnown RBP33.04■■■□□ 2.88
IRF1-203ENST00000437654 WIZO95785 1651 aa32.99■■■□□ 2.87
IRF1-203ENST00000437654 TOP2AP11388 1531 aaKnown RBP32.74■■■□□ 2.83
IRF1-203ENST00000437654 SUPT5HO00267 1087 aaKnown RBP32.6■■■□□ 2.81
IRF1-203ENST00000437654 CCDC88BA6NC98 1476 aa32.37■■■□□ 2.77
IRF1-203ENST00000437654 CADPSQ9ULU8 1353 aa32.34■■■□□ 2.77
IRF1-203ENST00000437654 LAMC3Q9Y6N6 1575 aa32.31■■■□□ 2.76
IRF1-203ENST00000437654 NESP48681 1621 aa32.21■■■□□ 2.75
IRF1-203ENST00000437654 CFTRP13569 1480 aa32.21■■■□□ 2.75
IRF1-203ENST00000437654 PDS5BQ9NTI5 1447 aa32.14■■■□□ 2.74
IRF1-203ENST00000437654 ERCC6Q03468 1493 aa32.03■■■□□ 2.72
IRF1-203ENST00000437654 FANCD2Q9BXW9 1451 aa31.91■■■□□ 2.7
IRF1-203ENST00000437654 PRDM2Q13029 1718 aa31.85■■■□□ 2.69
IRF1-203ENST00000437654 CEP164Q9UPV0 1460 aa31.82■■■□□ 2.68
IRF1-203ENST00000437654 KIF21AQ7Z4S6 1674 aa31.8■■■□□ 2.68
IRF1-203ENST00000437654 MRC2Q9UBG0 1479 aa31.71■■■□□ 2.67
IRF1-203ENST00000437654 THOC2Q8NI27 1593 aaKnown RBP31.64■■■□□ 2.66
IRF1-203ENST00000437654 CUX2O14529 1486 aa31.62■■■□□ 2.65
IRF1-203ENST00000437654 ABCC8Q09428 1581 aa31.58■■■□□ 2.65
IRF1-203ENST00000437654 WDR62O43379 1518 aa31.58■■■□□ 2.65
IRF1-203ENST00000437654 URB2Q14146 1524 aaKnown RBP31.51■■■□□ 2.63
IRF1-203ENST00000437654 TOPBP1Q92547 1522 aa31.42■■■□□ 2.62
IRF1-203ENST00000437654 DNMBPQ6XZF7 1577 aa31.42■■■□□ 2.62
IRF1-203ENST00000437654 WRNQ14191 1432 aaPredicted RBP eCLIP31.31■■■□□ 2.6
IRF1-203ENST00000437654 CUX1P39880 1505 aa31.29■■■□□ 2.6
IRF1-203ENST00000437654 IFT140Q96RY7 1462 aa31.2■■■□□ 2.58
IRF1-203ENST00000437654 POLA1P09884 1462 aaPredicted RBP31.17■■■□□ 2.58
IRF1-203ENST00000437654 TOP2BQ02880 1626 aa31.16■■■□□ 2.58
IRF1-203ENST00000437654 FGD5Q6ZNL6 1462 aa31.14■■■□□ 2.57
IRF1-203ENST00000437654 SOGA1O94964 1423 aa31.12■■■□□ 2.57
IRF1-203ENST00000437654 BIVM-ERCC5R4GMW8 1640 aa31.12■■■□□ 2.57
IRF1-203ENST00000437654 SYNJ1O43426 1573 aa31.09■■■□□ 2.57
IRF1-203ENST00000437654 TARBP1Q13395 1621 aaKnown RBP31.02■■■□□ 2.56
IRF1-203ENST00000437654 RAD54L2Q9Y4B4 1467 aa31■■■□□ 2.55
IRF1-203ENST00000437654 ABCA10Q8WWZ4 1543 aa30.93■■■□□ 2.54
IRF1-203ENST00000437654 WDR97A6NE52 1622 aa30.91■■■□□ 2.54
IRF1-203ENST00000437654 ZNF608Q9ULD9 1512 aaPredicted RBP30.91■■■□□ 2.54
IRF1-203ENST00000437654 TRIM41Q8WV44 630 aa30.87■■■□□ 2.53
IRF1-203ENST00000437654 TDRD9Q8NDG6 1382 aaKnown RBP30.84■■■□□ 2.53
IRF1-203ENST00000437654 AQRO60306 1485 aaKnown RBP eCLIP30.82■■■□□ 2.531e-6■■■■■ 28
IRF1-203ENST00000437654 EIF4G3O43432 1585 aaKnown RBP30.77■■■□□ 2.52
IRF1-203ENST00000437654 GAPVD1Q14C86 1478 aa30.74■■■□□ 2.51
IRF1-203ENST00000437654 CHIC1Q5VXU3 224 aa30.71■■■□□ 2.51
IRF1-203ENST00000437654 GRIN2BQ13224 1484 aa30.7■■■□□ 2.51
IRF1-203ENST00000437654 ABCA5Q8WWZ7 1642 aa30.68■■■□□ 2.5
IRF1-203ENST00000437654 KIF27Q86VH2 1401 aa30.65■■■□□ 2.5
IRF1-203ENST00000437654 MAGI1Q96QZ7 1491 aaPredicted RBP30.59■■■□□ 2.49
IRF1-203ENST00000437654 ERICH3Q5RHP9 1530 aa30.57■■■□□ 2.48
IRF1-203ENST00000437654 SNAPC4Q5SXM2 1469 aa30.52■■■□□ 2.48
IRF1-203ENST00000437654 PBRM1Q86U86 1689 aa30.52■■■□□ 2.48
IRF1-203ENST00000437654 IGF1RP08069 1367 aa30.49■■■□□ 2.47
IRF1-203ENST00000437654 CHMP7Q8WUX9 453 aaPredicted RBP30.46■■■□□ 2.47
IRF1-203ENST00000437654 SYNJ2O15056 1496 aa30.45■■■□□ 2.47
IRF1-203ENST00000437654 OSCARQ8IYS5 282 aa30.45■■■□□ 2.47
IRF1-203ENST00000437654 FHAD1B1AJZ9 1412 aa30.44■■■□□ 2.46
IRF1-203ENST00000437654 FBLN2P98095 1184 aa30.41■■■□□ 2.46
IRF1-203ENST00000437654 EEA1Q15075 1411 aa30.38■■■□□ 2.45
IRF1-203ENST00000437654 RUSC2Q8N2Y8 1516 aa30.36■■■□□ 2.45
IRF1-203ENST00000437654 ADAMTS12P58397 1594 aa30.34■■■□□ 2.45
IRF1-203ENST00000437654 CARMIL1Q5VZK9 1371 aa30.31■■■□□ 2.44
IRF1-203ENST00000437654 CUL7Q14999 1698 aa30.31■■■□□ 2.44
IRF1-203ENST00000437654 CHD1O14646 1710 aa30.27■■■□□ 2.44
IRF1-203ENST00000437654 CSRNP3Q8WYN3 585 aa30.27■■■□□ 2.44
IRF1-203ENST00000437654 GRIN2AQ12879 1464 aa30.26■■■□□ 2.44
IRF1-203ENST00000437654 DNAJC5Q9H3Z4 198 aa30.24■■■□□ 2.43
IRF1-203ENST00000437654 RAPGEF2Q9Y4G8 1499 aa30.16■■■□□ 2.42
IRF1-203ENST00000437654 NUP160Q12769 1436 aa30.15■■■□□ 2.42
IRF1-203ENST00000437654 PRXQ9BXM0 1461 aa30.14■■■□□ 2.42
IRF1-203ENST00000437654 FAM9AQ8IZU1 332 aaPredicted RBP30.08■■■□□ 2.41
IRF1-203ENST00000437654 CLASP1Q7Z460 1538 aa30.05■■■□□ 2.4
IRF1-203ENST00000437654 CEP170Q5SW79 1584 aa30.03■■■□□ 2.4
IRF1-203ENST00000437654 KIAA0586Q9BVV6 1533 aa29.99■■■□□ 2.39
IRF1-203ENST00000437654 JPH4Q96JJ6 628 aa29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms