RNA–Protein interactions for RNA: ENST00000437113.2

LINC01039-201, Transcript of long intergenic non-protein coding RNA 1039, humanhuman

TSL 5 BASIC

Gene LINC01039, Length 650 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01039-201ENST00000437113 NISCHQ9Y2I1 1504 aa24.71■■□□□ 1.55
LINC01039-201ENST00000437113 CCDC180Q9P1Z9 1646 aa21.98■■□□□ 1.11
LINC01039-201ENST00000437113 ABCC9O60706 1549 aa21.24■□□□□ 0.99
LINC01039-201ENST00000437113 ZCCHC6Q5VYS8 1495 aaKnown RBP20.62■□□□□ 0.89
LINC01039-201ENST00000437113 NACADO15069 1562 aa20.61■□□□□ 0.89
LINC01039-201ENST00000437113 RB1CC1Q8TDY2 1594 aa20.59■□□□□ 0.89
LINC01039-201ENST00000437113 MYO15BQ96JP2 1530 aa20.56■□□□□ 0.88
LINC01039-201ENST00000437113 DCAF8L2P0C7V8 631 aa20.53■□□□□ 0.88
LINC01039-201ENST00000437113 DCAF1Q9Y4B6 1507 aa20.52■□□□□ 0.87
LINC01039-201ENST00000437113 UNC13AQ9UPW8 1703 aa20.13■□□□□ 0.81
LINC01039-201ENST00000437113 SCRIBQ14160 1630 aa19.97■□□□□ 0.79
LINC01039-201ENST00000437113 BICRAQ9NZM4 1560 aa19.9■□□□□ 0.78
LINC01039-201ENST00000437113 PABPN1Q86U42 306 aaKnown RBP eCLIP19.84■□□□□ 0.77
LINC01039-201ENST00000437113 SHROOM4Q9ULL8 1493 aa19.8■□□□□ 0.76
LINC01039-201ENST00000437113 EIF4G1Q04637 1599 aaKnown RBP19.38■□□□□ 0.69
LINC01039-201ENST00000437113 DNAJC5BQ9UF47 199 aa19.3■□□□□ 0.68
LINC01039-201ENST00000437113 CC2D2AQ9P2K1 1620 aa19.26■□□□□ 0.67
LINC01039-201ENST00000437113 BAZ1AQ9NRL2 1556 aaPredicted RBP19.18■□□□□ 0.66
LINC01039-201ENST00000437113 CECR2Q9BXF3 1484 aa19.17■□□□□ 0.66
LINC01039-201ENST00000437113 SMARCA4P51532 1647 aa19.15■□□□□ 0.66
LINC01039-201ENST00000437113 SMARCA2P51531 1590 aa19.03■□□□□ 0.64
LINC01039-201ENST00000437113 MROH2BQ7Z745 1585 aa19.01■□□□□ 0.63
LINC01039-201ENST00000437113 PEG3Q9GZU2 1588 aa19■□□□□ 0.63
LINC01039-201ENST00000437113 ATAD2BQ9ULI0 1458 aa18.99■□□□□ 0.63
LINC01039-201ENST00000437113 NCAPD3P42695 1498 aa18.98■□□□□ 0.63
LINC01039-201ENST00000437113 HMGXB3Q12766 1538 aa18.92■□□□□ 0.62
LINC01039-201ENST00000437113 BAZ1BQ9UIG0 1483 aaKnown RBP18.86■□□□□ 0.61
LINC01039-201ENST00000437113 RSF1Q96T23 1441 aaPredicted RBP18.86■□□□□ 0.61
LINC01039-201ENST00000437113 WIZO95785 1651 aa18.84■□□□□ 0.61
LINC01039-201ENST00000437113 SUPT5HO00267 1087 aaKnown RBP18.7■□□□□ 0.58
LINC01039-201ENST00000437113 TOP2AP11388 1531 aaKnown RBP18.67■□□□□ 0.58
LINC01039-201ENST00000437113 LAMC3Q9Y6N6 1575 aa18.49■□□□□ 0.55
LINC01039-201ENST00000437113 CADPSQ9ULU8 1353 aa18.42■□□□□ 0.54
LINC01039-201ENST00000437113 CCDC88BA6NC98 1476 aa18.42■□□□□ 0.54
LINC01039-201ENST00000437113 NESP48681 1621 aa18.41■□□□□ 0.54
LINC01039-201ENST00000437113 CFTRP13569 1480 aa18.35■□□□□ 0.53
LINC01039-201ENST00000437113 PDS5BQ9NTI5 1447 aa18.35■□□□□ 0.53
LINC01039-201ENST00000437113 ERCC6Q03468 1493 aa18.33■□□□□ 0.53
LINC01039-201ENST00000437113 PRDM2Q13029 1718 aa18.32■□□□□ 0.52
LINC01039-201ENST00000437113 KIF21AQ7Z4S6 1674 aa18.26■□□□□ 0.51
LINC01039-201ENST00000437113 FANCD2Q9BXW9 1451 aa18.2■□□□□ 0.5
LINC01039-201ENST00000437113 CEP164Q9UPV0 1460 aa18.18■□□□□ 0.5
LINC01039-201ENST00000437113 THOC2Q8NI27 1593 aaKnown RBP18.15■□□□□ 0.5
LINC01039-201ENST00000437113 CUX2O14529 1486 aa18.12■□□□□ 0.49
LINC01039-201ENST00000437113 MRC2Q9UBG0 1479 aa18.12■□□□□ 0.49
LINC01039-201ENST00000437113 WDR62O43379 1518 aa18.07■□□□□ 0.48
LINC01039-201ENST00000437113 ABCC8Q09428 1581 aa18.02■□□□□ 0.48
LINC01039-201ENST00000437113 URB2Q14146 1524 aaKnown RBP17.99■□□□□ 0.47
LINC01039-201ENST00000437113 DNMBPQ6XZF7 1577 aa17.95■□□□□ 0.46
LINC01039-201ENST00000437113 TOPBP1Q92547 1522 aa17.93■□□□□ 0.46
LINC01039-201ENST00000437113 CUX1P39880 1505 aa17.83■□□□□ 0.45
LINC01039-201ENST00000437113 IFT140Q96RY7 1462 aa17.81■□□□□ 0.44
LINC01039-201ENST00000437113 WRNQ14191 1432 aaPredicted RBP eCLIP17.81■□□□□ 0.44
LINC01039-201ENST00000437113 POLA1P09884 1462 aaPredicted RBP17.78■□□□□ 0.44
LINC01039-201ENST00000437113 BIVM-ERCC5R4GMW8 1640 aa17.78■□□□□ 0.44
LINC01039-201ENST00000437113 TOP2BQ02880 1626 aa17.77■□□□□ 0.44
LINC01039-201ENST00000437113 FGD5Q6ZNL6 1462 aa17.76■□□□□ 0.43
LINC01039-201ENST00000437113 TARBP1Q13395 1621 aaKnown RBP17.74■□□□□ 0.43
LINC01039-201ENST00000437113 SYNJ1O43426 1573 aa17.73■□□□□ 0.43
LINC01039-201ENST00000437113 SOGA1O94964 1423 aa17.72■□□□□ 0.43
LINC01039-201ENST00000437113 WDR97A6NE52 1622 aa17.69■□□□□ 0.42
LINC01039-201ENST00000437113 CHIC1Q5VXU3 224 aa17.68■□□□□ 0.42
LINC01039-201ENST00000437113 RAD54L2Q9Y4B4 1467 aa17.67■□□□□ 0.42
LINC01039-201ENST00000437113 ZNF608Q9ULD9 1512 aaPredicted RBP17.64■□□□□ 0.41
LINC01039-201ENST00000437113 EIF4G3O43432 1585 aaKnown RBP17.63■□□□□ 0.41
LINC01039-201ENST00000437113 TRIM41Q8WV44 630 aa17.63■□□□□ 0.41
LINC01039-201ENST00000437113 ABCA10Q8WWZ4 1543 aa17.62■□□□□ 0.41
LINC01039-201ENST00000437113 AQRO60306 1485 aaKnown RBP eCLIP17.56■□□□□ 0.4
LINC01039-201ENST00000437113 TDRD9Q8NDG6 1382 aaKnown RBP17.56■□□□□ 0.4
LINC01039-201ENST00000437113 ABCA5Q8WWZ7 1642 aa17.54■□□□□ 0.4
LINC01039-201ENST00000437113 GAPVD1Q14C86 1478 aa17.53■□□□□ 0.4
LINC01039-201ENST00000437113 PBRM1Q86U86 1689 aa17.52■□□□□ 0.39
LINC01039-201ENST00000437113 GRIN2BQ13224 1484 aa17.51■□□□□ 0.39
LINC01039-201ENST00000437113 MAGI1Q96QZ7 1491 aaPredicted RBP17.47■□□□□ 0.39
LINC01039-201ENST00000437113 ERICH3Q5RHP9 1530 aa17.44■□□□□ 0.38
LINC01039-201ENST00000437113 KIF27Q86VH2 1401 aa17.44■□□□□ 0.38
LINC01039-201ENST00000437113 SNAPC4Q5SXM2 1469 aa17.43■□□□□ 0.38
LINC01039-201ENST00000437113 CHD1O14646 1710 aa17.41■□□□□ 0.38
LINC01039-201ENST00000437113 SYNJ2O15056 1496 aa17.38■□□□□ 0.37
LINC01039-201ENST00000437113 OSCARQ8IYS5 282 aa17.38■□□□□ 0.37
LINC01039-201ENST00000437113 CHMP7Q8WUX9 453 aaPredicted RBP17.35■□□□□ 0.37
LINC01039-201ENST00000437113 ADAMTS12P58397 1594 aa17.35■□□□□ 0.37
LINC01039-201ENST00000437113 FHAD1B1AJZ9 1412 aa17.34■□□□□ 0.37
LINC01039-201ENST00000437113 DNAJC5Q9H3Z4 198 aa17.34■□□□□ 0.37
LINC01039-201ENST00000437113 CUL7Q14999 1698 aa17.33■□□□□ 0.37
LINC01039-201ENST00000437113 FBLN2P98095 1184 aa17.33■□□□□ 0.36
LINC01039-201ENST00000437113 IGF1RP08069 1367 aa17.31■□□□□ 0.36
LINC01039-201ENST00000437113 EEA1Q15075 1411 aa17.3■□□□□ 0.36
LINC01039-201ENST00000437113 GRIN2AQ12879 1464 aa17.28■□□□□ 0.36
LINC01039-201ENST00000437113 FAM9AQ8IZU1 332 aaPredicted RBP17.27■□□□□ 0.36
LINC01039-201ENST00000437113 RUSC2Q8N2Y8 1516 aa17.25■□□□□ 0.35
LINC01039-201ENST00000437113 CARMIL1Q5VZK9 1371 aa17.23■□□□□ 0.35
LINC01039-201ENST00000437113 CLASP1Q7Z460 1538 aa17.2■□□□□ 0.34
LINC01039-201ENST00000437113 NUP160Q12769 1436 aa17.2■□□□□ 0.34
LINC01039-201ENST00000437113 CEP170Q5SW79 1584 aa17.17■□□□□ 0.34
LINC01039-201ENST00000437113 RAPGEF2Q9Y4G8 1499 aa17.16■□□□□ 0.34
LINC01039-201ENST00000437113 CSRNP3Q8WYN3 585 aa17.15■□□□□ 0.34
LINC01039-201ENST00000437113 KIF21BO75037 1637 aa17.12■□□□□ 0.33
LINC01039-201ENST00000437113 PRXQ9BXM0 1461 aa17.12■□□□□ 0.33
LINC01039-201ENST00000437113 KIAA0586Q9BVV6 1533 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms