RNA–Protein interactions for RNA: ENST00000436828.5

NCOR1-209, Transcript of nuclear receptor corepressor 1, humanhuman

TSL 1 (best)

Gene NCOR1, Length 1,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOR1-209ENST00000436828 NISCHQ9Y2I1 1504 aa41.01■■■■■ 4.16
NCOR1-209ENST00000436828 CCDC180Q9P1Z9 1646 aa35.9■■■■□ 3.34
NCOR1-209ENST00000436828 ABCC9O60706 1549 aa34.39■■■■□ 3.1
NCOR1-209ENST00000436828 ZCCHC6Q5VYS8 1495 aaKnown RBP34.36■■■■□ 3.09
NCOR1-209ENST00000436828 DCAF8L2P0C7V8 631 aa34.05■■■■□ 3.04
NCOR1-209ENST00000436828 DCAF1Q9Y4B6 1507 aa33.84■■■■□ 3.01
NCOR1-209ENST00000436828 MYO15BQ96JP2 1530 aa33.58■■■□□ 2.97
NCOR1-209ENST00000436828 NACADO15069 1562 aa33.53■■■□□ 2.96
NCOR1-209ENST00000436828 RB1CC1Q8TDY2 1594 aa33.34■■■□□ 2.93
NCOR1-209ENST00000436828 SHROOM4Q9ULL8 1493 aa33.26■■■□□ 2.92
NCOR1-209ENST00000436828 SCRIBQ14160 1630 aa33.04■■■□□ 2.88
NCOR1-209ENST00000436828 UNC13AQ9UPW8 1703 aa32.77■■■□□ 2.84
NCOR1-209ENST00000436828 BICRAQ9NZM4 1560 aa32.42■■■□□ 2.78
NCOR1-209ENST00000436828 PABPN1Q86U42 306 aaKnown RBP eCLIP32.39■■■□□ 2.78
NCOR1-209ENST00000436828 SUPT5HO00267 1087 aaKnown RBP32.27■■■□□ 2.76
NCOR1-209ENST00000436828 CECR2Q9BXF3 1484 aa31.96■■■□□ 2.71
NCOR1-209ENST00000436828 MROH2BQ7Z745 1585 aa31.71■■■□□ 2.67
NCOR1-209ENST00000436828 RSF1Q96T23 1441 aaPredicted RBP31.68■■■□□ 2.66
NCOR1-209ENST00000436828 BAZ1AQ9NRL2 1556 aaPredicted RBP31.66■■■□□ 2.66
NCOR1-209ENST00000436828 SMARCA4P51532 1647 aa31.62■■■□□ 2.65
NCOR1-209ENST00000436828 EIF4G1Q04637 1599 aaKnown RBP31.45■■■□□ 2.63
NCOR1-209ENST00000436828 WIZO95785 1651 aa31.44■■■□□ 2.62
NCOR1-209ENST00000436828 CHIC1Q5VXU3 224 aa31.23■■■□□ 2.59
NCOR1-209ENST00000436828 PEG3Q9GZU2 1588 aa31.22■■■□□ 2.59
NCOR1-209ENST00000436828 ATAD2BQ9ULI0 1458 aa31.19■■■□□ 2.58
NCOR1-209ENST00000436828 SMARCA2P51531 1590 aa31.12■■■□□ 2.57
NCOR1-209ENST00000436828 CC2D2AQ9P2K1 1620 aa31.1■■■□□ 2.57
NCOR1-209ENST00000436828 TOP2AP11388 1531 aaKnown RBP31.04■■■□□ 2.56
NCOR1-209ENST00000436828 BAZ1BQ9UIG0 1483 aaKnown RBP30.98■■■□□ 2.55
NCOR1-209ENST00000436828 NCAPD3P42695 1498 aa30.97■■■□□ 2.55
NCOR1-209ENST00000436828 HMGXB3Q12766 1538 aa30.87■■■□□ 2.53
NCOR1-209ENST00000436828 DNAJC5BQ9UF47 199 aa30.77■■■□□ 2.52
NCOR1-209ENST00000436828 CCDC88BA6NC98 1476 aa30.75■■■□□ 2.51
NCOR1-209ENST00000436828 TRIM41Q8WV44 630 aa30.35■■■□□ 2.45
NCOR1-209ENST00000436828 CFTRP13569 1480 aa30.18■■■□□ 2.42
NCOR1-209ENST00000436828 CADPSQ9ULU8 1353 aa30.16■■■□□ 2.42
NCOR1-209ENST00000436828 NESP48681 1621 aa30.1■■■□□ 2.41
NCOR1-209ENST00000436828 ABCC8Q09428 1581 aa30.02■■■□□ 2.4
NCOR1-209ENST00000436828 LOC105371045A0A1W2PR82 267 aa30.01■■■□□ 2.4
NCOR1-209ENST00000436828 PRDM2Q13029 1718 aa30.01■■■□□ 2.39
NCOR1-209ENST00000436828 LAMC3Q9Y6N6 1575 aa29.97■■■□□ 2.39
NCOR1-209ENST00000436828 FANCD2Q9BXW9 1451 aa29.83■■■□□ 2.37
NCOR1-209ENST00000436828 WRNQ14191 1432 aaPredicted RBP eCLIP29.8■■■□□ 2.36
NCOR1-209ENST00000436828 SYNJ1O43426 1573 aa29.75■■■□□ 2.35
NCOR1-209ENST00000436828 PDS5BQ9NTI5 1447 aa29.74■■■□□ 2.35
NCOR1-209ENST00000436828 FAM9AQ8IZU1 332 aaPredicted RBP29.73■■■□□ 2.35
NCOR1-209ENST00000436828 KIF21AQ7Z4S6 1674 aa29.72■■■□□ 2.35
NCOR1-209ENST00000436828 CUX1P39880 1505 aa29.67■■■□□ 2.34
NCOR1-209ENST00000436828 CEP164Q9UPV0 1460 aa29.67■■■□□ 2.34
NCOR1-209ENST00000436828 TOP2BQ02880 1626 aa29.61■■■□□ 2.33
NCOR1-209ENST00000436828 BIVM-ERCC5R4GMW8 1640 aa29.59■■■□□ 2.33
NCOR1-209ENST00000436828 EEA1Q15075 1411 aa29.57■■■□□ 2.32
NCOR1-209ENST00000436828 URB2Q14146 1524 aaKnown RBP29.51■■■□□ 2.32
NCOR1-209ENST00000436828 ERCC6Q03468 1493 aa29.48■■■□□ 2.31
NCOR1-209ENST00000436828 TOPBP1Q92547 1522 aa29.48■■■□□ 2.31
NCOR1-209ENST00000436828 DNMBPQ6XZF7 1577 aa29.47■■■□□ 2.31
NCOR1-209ENST00000436828 MRC2Q9UBG0 1479 aa29.4■■■□□ 2.3
NCOR1-209ENST00000436828 SOGA1O94964 1423 aa29.39■■■□□ 2.3
NCOR1-209ENST00000436828 FGD5Q6ZNL6 1462 aa29.39■■■□□ 2.29
NCOR1-209ENST00000436828 POLA1P09884 1462 aaPredicted RBP29.31■■■□□ 2.28
NCOR1-209ENST00000436828 RUSC2Q8N2Y8 1516 aa29.31■■■□□ 2.28
NCOR1-209ENST00000436828 THOC2Q8NI27 1593 aaKnown RBP29.3■■■□□ 2.28
NCOR1-209ENST00000436828 CSRNP3Q8WYN3 585 aa29.3■■■□□ 2.28
NCOR1-209ENST00000436828 PCGF6Q9BYE7 350 aa29.28■■■□□ 2.28
NCOR1-209ENST00000436828 WDR62O43379 1518 aa29.27■■■□□ 2.28
NCOR1-209ENST00000436828 RAD54L2Q9Y4B4 1467 aa29.25■■■□□ 2.27
NCOR1-209ENST00000436828 EHMT2Q96KQ7 1210 aa29.24■■■□□ 2.27
NCOR1-209ENST00000436828 TRIM26Q12899 539 aaPredicted RBP29.21■■■□□ 2.27
NCOR1-209ENST00000436828 TNIKQ9UKE5 1360 aa29.17■■■□□ 2.26
NCOR1-209ENST00000436828 GOLGA3Q08378 1498 aa29.14■■■□□ 2.25
NCOR1-209ENST00000436828 CUX2O14529 1486 aa29.13■■■□□ 2.25
NCOR1-209ENST00000436828 KIF21BO75037 1637 aa29.1■■■□□ 2.25
NCOR1-209ENST00000436828 ABCA10Q8WWZ4 1543 aa29.09■■■□□ 2.25
NCOR1-209ENST00000436828 TARBP1Q13395 1621 aaKnown RBP29.08■■■□□ 2.25
NCOR1-209ENST00000436828 WDR97A6NE52 1622 aa29.06■■■□□ 2.24
NCOR1-209ENST00000436828 KIF27Q86VH2 1401 aa29.06■■■□□ 2.24
NCOR1-209ENST00000436828 CEP162Q5TB80 1403 aa29.01■■■□□ 2.24
NCOR1-209ENST00000436828 TDRD9Q8NDG6 1382 aaKnown RBP28.99■■■□□ 2.23
NCOR1-209ENST00000436828 UBTFP17480 764 aaKnown RBP28.97■■■□□ 2.23
NCOR1-209ENST00000436828 IFT140Q96RY7 1462 aa28.96■■■□□ 2.23
NCOR1-209ENST00000436828 HRCP23327 699 aa28.95■■■□□ 2.23
NCOR1-209ENST00000436828 ZNF608Q9ULD9 1512 aaPredicted RBP28.91■■■□□ 2.22
NCOR1-209ENST00000436828 ABCA5Q8WWZ7 1642 aa28.91■■■□□ 2.22
NCOR1-209ENST00000436828 IGF1RP08069 1367 aa28.9■■■□□ 2.22
NCOR1-209ENST00000436828 AQRO60306 1485 aaKnown RBP eCLIP28.87■■■□□ 2.215e-8■■■□□ 17.4
NCOR1-209ENST00000436828 GAPVD1Q14C86 1478 aa28.86■■■□□ 2.21
NCOR1-209ENST00000436828 ERICH3Q5RHP9 1530 aa28.81■■■□□ 2.2
NCOR1-209ENST00000436828 PRXQ9BXM0 1461 aa28.79■■■□□ 2.2
NCOR1-209ENST00000436828 RAPGEF2Q9Y4G8 1499 aa28.78■■■□□ 2.2
NCOR1-209ENST00000436828 EIF4G3O43432 1585 aaKnown RBP28.76■■■□□ 2.2
NCOR1-209ENST00000436828 PBRM1Q86U86 1689 aa28.75■■■□□ 2.19
NCOR1-209ENST00000436828 CARMIL1Q5VZK9 1371 aa28.72■■■□□ 2.19
NCOR1-209ENST00000436828 GRIN2BQ13224 1484 aa28.68■■■□□ 2.18
NCOR1-209ENST00000436828 CLIP1P30622 1438 aa28.67■■■□□ 2.18
NCOR1-209ENST00000436828 CUL7Q14999 1698 aa28.65■■■□□ 2.18
NCOR1-209ENST00000436828 SNAPC4Q5SXM2 1469 aa28.57■■■□□ 2.16
NCOR1-209ENST00000436828 ADAMTS12P58397 1594 aa28.56■■■□□ 2.16
NCOR1-209ENST00000436828 FHAD1B1AJZ9 1412 aa28.52■■■□□ 2.16
NCOR1-209ENST00000436828 VPS8Q8N3P4 1428 aa28.52■■■□□ 2.16
NCOR1-209ENST00000436828 PPARGC1BQ86YN6 1023 aaKnown RBP28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms