RNA–Protein interactions for RNA: ENST00000435574.1

LINC01354-202, Transcript of long intergenic non-protein coding RNA 1354, humanhuman

TSL 1 (best) BASIC

Gene LINC01354, Length 2,860 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01354-202ENST00000435574 NISCHQ9Y2I1 1504 aa21.55■■□□□ 1.04
LINC01354-202ENST00000435574 CCDC180Q9P1Z9 1646 aa18.89■□□□□ 0.61
LINC01354-202ENST00000435574 ABCC9O60706 1549 aa18.54■□□□□ 0.56
LINC01354-202ENST00000435574 DCAF8L2P0C7V8 631 aa18.32■□□□□ 0.52
LINC01354-202ENST00000435574 ZCCHC6Q5VYS8 1495 aaKnown RBP17.96■□□□□ 0.47
LINC01354-202ENST00000435574 NACADO15069 1562 aa17.76■□□□□ 0.43
LINC01354-202ENST00000435574 RB1CC1Q8TDY2 1594 aa17.76■□□□□ 0.43
LINC01354-202ENST00000435574 DCAF1Q9Y4B6 1507 aa17.67■□□□□ 0.42
LINC01354-202ENST00000435574 MYO15BQ96JP2 1530 aa17.61■□□□□ 0.41
LINC01354-202ENST00000435574 SHROOM4Q9ULL8 1493 aa17.53■□□□□ 0.4
LINC01354-202ENST00000435574 SCRIBQ14160 1630 aa17.51■□□□□ 0.39
LINC01354-202ENST00000435574 PABPN1Q86U42 306 aaKnown RBP eCLIP17.49■□□□□ 0.39
LINC01354-202ENST00000435574 UNC13AQ9UPW8 1703 aa17.39■□□□□ 0.37
LINC01354-202ENST00000435574 BICRAQ9NZM4 1560 aa17.22■□□□□ 0.35
LINC01354-202ENST00000435574 CECR2Q9BXF3 1484 aa16.87■□□□□ 0.29
LINC01354-202ENST00000435574 DNAJC5BQ9UF47 199 aa16.83■□□□□ 0.28
LINC01354-202ENST00000435574 EIF4G1Q04637 1599 aaKnown RBP16.78■□□□□ 0.28
LINC01354-202ENST00000435574 MROH2BQ7Z745 1585 aa16.68■□□□□ 0.26
LINC01354-202ENST00000435574 CC2D2AQ9P2K1 1620 aa16.67■□□□□ 0.26
LINC01354-202ENST00000435574 SUPT5HO00267 1087 aaKnown RBP16.67■□□□□ 0.26
LINC01354-202ENST00000435574 BAZ1AQ9NRL2 1556 aaPredicted RBP16.66■□□□□ 0.26
LINC01354-202ENST00000435574 SMARCA4P51532 1647 aa16.65■□□□□ 0.26
LINC01354-202ENST00000435574 RSF1Q96T23 1441 aaPredicted RBP16.58■□□□□ 0.24
LINC01354-202ENST00000435574 WIZO95785 1651 aa16.53■□□□□ 0.24
LINC01354-202ENST00000435574 ATAD2BQ9ULI0 1458 aa16.52■□□□□ 0.24
LINC01354-202ENST00000435574 SMARCA2P51531 1590 aa16.46■□□□□ 0.23
LINC01354-202ENST00000435574 BAZ1BQ9UIG0 1483 aaKnown RBP16.44■□□□□ 0.22
LINC01354-202ENST00000435574 NCAPD3P42695 1498 aa16.41■□□□□ 0.22
LINC01354-202ENST00000435574 PEG3Q9GZU2 1588 aa16.37■□□□□ 0.21
LINC01354-202ENST00000435574 HMGXB3Q12766 1538 aa16.31■□□□□ 0.2
LINC01354-202ENST00000435574 TOP2AP11388 1531 aaKnown RBP16.26■□□□□ 0.19
LINC01354-202ENST00000435574 CCDC88BA6NC98 1476 aa16.17■□□□□ 0.18
LINC01354-202ENST00000435574 NESP48681 1621 aa16.11■□□□□ 0.17
LINC01354-202ENST00000435574 CADPSQ9ULU8 1353 aa16.03■□□□□ 0.16
LINC01354-202ENST00000435574 ERCC6Q03468 1493 aa15.94■□□□□ 0.14
LINC01354-202ENST00000435574 CFTRP13569 1480 aa15.94■□□□□ 0.14
LINC01354-202ENST00000435574 LAMC3Q9Y6N6 1575 aa15.93■□□□□ 0.14
LINC01354-202ENST00000435574 PDS5BQ9NTI5 1447 aa15.89■□□□□ 0.13
LINC01354-202ENST00000435574 FANCD2Q9BXW9 1451 aa15.86■□□□□ 0.13
LINC01354-202ENST00000435574 KIF21AQ7Z4S6 1674 aa15.84■□□□□ 0.13
LINC01354-202ENST00000435574 CEP164Q9UPV0 1460 aa15.8■□□□□ 0.12
LINC01354-202ENST00000435574 PRDM2Q13029 1718 aa15.75■□□□□ 0.11
LINC01354-202ENST00000435574 ABCC8Q09428 1581 aa15.74■□□□□ 0.11
LINC01354-202ENST00000435574 MRC2Q9UBG0 1479 aa15.69■□□□□ 0.1
LINC01354-202ENST00000435574 URB2Q14146 1524 aaKnown RBP15.67■□□□□ 0.1
LINC01354-202ENST00000435574 WRNQ14191 1432 aaPredicted RBP eCLIP15.64■□□□□ 0.09
LINC01354-202ENST00000435574 THOC2Q8NI27 1593 aaKnown RBP15.63■□□□□ 0.09
LINC01354-202ENST00000435574 TRIM41Q8WV44 630 aa15.62■□□□□ 0.09
LINC01354-202ENST00000435574 TOPBP1Q92547 1522 aa15.62■□□□□ 0.09
LINC01354-202ENST00000435574 CUX1P39880 1505 aa15.61■□□□□ 0.09
LINC01354-202ENST00000435574 WDR62O43379 1518 aa15.57■□□□□ 0.08
LINC01354-202ENST00000435574 SYNJ1O43426 1573 aa15.57■□□□□ 0.08
LINC01354-202ENST00000435574 DNMBPQ6XZF7 1577 aa15.57■□□□□ 0.08
LINC01354-202ENST00000435574 CHIC1Q5VXU3 224 aa15.57■□□□□ 0.08
LINC01354-202ENST00000435574 FGD5Q6ZNL6 1462 aa15.54■□□□□ 0.08
LINC01354-202ENST00000435574 RAD54L2Q9Y4B4 1467 aa15.53■□□□□ 0.08
LINC01354-202ENST00000435574 POLA1P09884 1462 aaPredicted RBP15.51■□□□□ 0.07
LINC01354-202ENST00000435574 SOGA1O94964 1423 aa15.51■□□□□ 0.07
LINC01354-202ENST00000435574 TOP2BQ02880 1626 aa15.49■□□□□ 0.07
LINC01354-202ENST00000435574 CUX2O14529 1486 aa15.49■□□□□ 0.07
LINC01354-202ENST00000435574 TDRD9Q8NDG6 1382 aaKnown RBP15.47■□□□□ 0.07
LINC01354-202ENST00000435574 FAM9AQ8IZU1 332 aaPredicted RBP15.45■□□□□ 0.06
LINC01354-202ENST00000435574 BIVM-ERCC5R4GMW8 1640 aa15.44■□□□□ 0.06
LINC01354-202ENST00000435574 ZNF608Q9ULD9 1512 aaPredicted RBP15.44■□□□□ 0.06
LINC01354-202ENST00000435574 AQRO60306 1485 aaKnown RBP eCLIP15.42■□□□□ 0.06
LINC01354-202ENST00000435574 IFT140Q96RY7 1462 aa15.41■□□□□ 0.06
LINC01354-202ENST00000435574 TARBP1Q13395 1621 aaKnown RBP15.38■□□□□ 0.05
LINC01354-202ENST00000435574 EHMT2Q96KQ7 1210 aa15.37■□□□□ 0.05
LINC01354-202ENST00000435574 FBLN2P98095 1184 aa15.35■□□□□ 0.05
LINC01354-202ENST00000435574 RUSC2Q8N2Y8 1516 aa15.33■□□□□ 0.04
LINC01354-202ENST00000435574 ABCA10Q8WWZ4 1543 aa15.32■□□□□ 0.04
LINC01354-202ENST00000435574 GAPVD1Q14C86 1478 aa15.3■□□□□ 0.04
LINC01354-202ENST00000435574 EIF4G3O43432 1585 aaKnown RBP15.3■□□□□ 0.04
LINC01354-202ENST00000435574 KIF27Q86VH2 1401 aa15.28■□□□□ 0.04
LINC01354-202ENST00000435574 WDR97A6NE52 1622 aa15.25■□□□□ 0.03
LINC01354-202ENST00000435574 CHMP7Q8WUX9 453 aaPredicted RBP15.23■□□□□ 0.03
LINC01354-202ENST00000435574 GRIN2BQ13224 1484 aa15.22■□□□□ 0.03
LINC01354-202ENST00000435574 SNAPC4Q5SXM2 1469 aa15.21■□□□□ 0.03
LINC01354-202ENST00000435574 ABCA5Q8WWZ7 1642 aa15.21■□□□□ 0.03
LINC01354-202ENST00000435574 IGF1RP08069 1367 aa15.21■□□□□ 0.02
LINC01354-202ENST00000435574 CSRNP3Q8WYN3 585 aa15.2■□□□□ 0.02
LINC01354-202ENST00000435574 PBRM1Q86U86 1689 aa15.18■□□□□ 0.02
LINC01354-202ENST00000435574 CARMIL1Q5VZK9 1371 aa15.15■□□□□ 0.02
LINC01354-202ENST00000435574 RANGAP1P46060 587 aaPredicted RBP15.12■□□□□ 0.01
LINC01354-202ENST00000435574 ERICH3Q5RHP9 1530 aa15.12■□□□□ 0.01
LINC01354-202ENST00000435574 MAGI1Q96QZ7 1491 aaPredicted RBP15.11■□□□□ 0.01
LINC01354-202ENST00000435574 OSCARQ8IYS5 282 aa15.1■□□□□ 0.01
LINC01354-202ENST00000435574 FHAD1B1AJZ9 1412 aa15.09■□□□□ 0.01
LINC01354-202ENST00000435574 LOC105371045A0A1W2PR82 267 aa15.08■□□□□ 0.01
LINC01354-202ENST00000435574 SYNJ2O15056 1496 aa15.08■□□□□ 0
LINC01354-202ENST00000435574 CHD1O14646 1710 aa15.08■□□□□ 0
LINC01354-202ENST00000435574 UBTFP17480 764 aaKnown RBP15.08■□□□□ 0
LINC01354-202ENST00000435574 EEA1Q15075 1411 aa15.07■□□□□ 0
LINC01354-202ENST00000435574 ADAMTS12P58397 1594 aa15.06■□□□□ 0
LINC01354-202ENST00000435574 GRIN2AQ12879 1464 aa15.03■□□□□ -0
LINC01354-202ENST00000435574 RAPGEF2Q9Y4G8 1499 aa15.03■□□□□ -0
LINC01354-202ENST00000435574 CUL7Q14999 1698 aa15.03■□□□□ -0
LINC01354-202ENST00000435574 PRXQ9BXM0 1461 aa15□□□□□ -0.01
LINC01354-202ENST00000435574 TTBK1Q5TCY1 1321 aaPredicted RBP15□□□□□ -0.01
LINC01354-202ENST00000435574 CEP170Q5SW79 1584 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms