RNA–Protein interactions for RNA: ENST00000434242.2

RNF135-203, Transcript of ring finger protein 135, humanhuman

TSL 3

Gene RNF135, Length 257 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135-203ENST00000434242 NISCHQ9Y2I1 1504 aa18.31■□□□□ 0.52
RNF135-203ENST00000434242 ABCC9O60706 1549 aa15.94■□□□□ 0.14
RNF135-203ENST00000434242 CCDC180Q9P1Z9 1646 aa15.88■□□□□ 0.13
RNF135-203ENST00000434242 ZCCHC6Q5VYS8 1495 aaKnown RBP15.38■□□□□ 0.05
RNF135-203ENST00000434242 DCAF8L2P0C7V8 631 aa15.24■□□□□ 0.03
RNF135-203ENST00000434242 DNAJC5BQ9UF47 199 aa15.16■□□□□ 0.02
RNF135-203ENST00000434242 SHROOM4Q9ULL8 1493 aa15.1■□□□□ 0.01
RNF135-203ENST00000434242 DCAF1Q9Y4B6 1507 aa15.1■□□□□ 0.01
RNF135-203ENST00000434242 RB1CC1Q8TDY2 1594 aa15.09■□□□□ 0.01
RNF135-203ENST00000434242 NACADO15069 1562 aa14.94□□□□□ -0.02
RNF135-203ENST00000434242 MYO15BQ96JP2 1530 aa14.88□□□□□ -0.03
RNF135-203ENST00000434242 PABPN1Q86U42 306 aaKnown RBP eCLIP14.76□□□□□ -0.05
RNF135-203ENST00000434242 UNC13AQ9UPW8 1703 aa14.7□□□□□ -0.06
RNF135-203ENST00000434242 SCRIBQ14160 1630 aa14.69□□□□□ -0.06
RNF135-203ENST00000434242 BICRAQ9NZM4 1560 aa14.65□□□□□ -0.06
RNF135-203ENST00000434242 SUPT5HO00267 1087 aaKnown RBP14.59□□□□□ -0.07
RNF135-203ENST00000434242 CECR2Q9BXF3 1484 aa14.4□□□□□ -0.1
RNF135-203ENST00000434242 CC2D2AQ9P2K1 1620 aa14.4□□□□□ -0.1
RNF135-203ENST00000434242 EIF4G1Q04637 1599 aaKnown RBP14.32□□□□□ -0.12
RNF135-203ENST00000434242 RSF1Q96T23 1441 aaPredicted RBP14.26□□□□□ -0.13
RNF135-203ENST00000434242 MROH2BQ7Z745 1585 aa14.17□□□□□ -0.14
RNF135-203ENST00000434242 DNAJC5Q9H3Z4 198 aa14.14□□□□□ -0.15
RNF135-203ENST00000434242 BAZ1AQ9NRL2 1556 aaPredicted RBP14.13□□□□□ -0.15
RNF135-203ENST00000434242 SMARCA4P51532 1647 aa14.04□□□□□ -0.16
RNF135-203ENST00000434242 WIZO95785 1651 aa14.04□□□□□ -0.16
RNF135-203ENST00000434242 CHIC1Q5VXU3 224 aa13.98□□□□□ -0.17
RNF135-203ENST00000434242 TOP2AP11388 1531 aaKnown RBP13.9□□□□□ -0.18
RNF135-203ENST00000434242 CUX2O14529 1486 aa13.9□□□□□ -0.18
RNF135-203ENST00000434242 PEG3Q9GZU2 1588 aa13.83□□□□□ -0.19
RNF135-203ENST00000434242 ATAD2BQ9ULI0 1458 aa13.82□□□□□ -0.2
RNF135-203ENST00000434242 SMARCA2P51531 1590 aa13.8□□□□□ -0.2
RNF135-203ENST00000434242 NCAPD3P42695 1498 aa13.8□□□□□ -0.2
RNF135-203ENST00000434242 CCDC88BA6NC98 1476 aa13.79□□□□□ -0.2
RNF135-203ENST00000434242 ERCC6Q03468 1493 aa13.79□□□□□ -0.2
RNF135-203ENST00000434242 BAZ1BQ9UIG0 1483 aaKnown RBP13.76□□□□□ -0.21
RNF135-203ENST00000434242 TRIM41Q8WV44 630 aa13.7□□□□□ -0.22
RNF135-203ENST00000434242 HMGXB3Q12766 1538 aa13.68□□□□□ -0.22
RNF135-203ENST00000434242 NESP48681 1621 aa13.61□□□□□ -0.23
RNF135-203ENST00000434242 THOC2Q8NI27 1593 aaKnown RBP13.57□□□□□ -0.24
RNF135-203ENST00000434242 LAMC3Q9Y6N6 1575 aa13.53□□□□□ -0.24
RNF135-203ENST00000434242 ABCC8Q09428 1581 aa13.52□□□□□ -0.25
RNF135-203ENST00000434242 FAM9AQ8IZU1 332 aaPredicted RBP13.49□□□□□ -0.25
RNF135-203ENST00000434242 LOC105371045A0A1W2PR82 267 aa13.48□□□□□ -0.25
RNF135-203ENST00000434242 PDS5BQ9NTI5 1447 aa13.44□□□□□ -0.26
RNF135-203ENST00000434242 WRNQ14191 1432 aaPredicted RBP eCLIP13.43□□□□□ -0.26
RNF135-203ENST00000434242 KIF21AQ7Z4S6 1674 aa13.43□□□□□ -0.26
RNF135-203ENST00000434242 CFTRP13569 1480 aa13.39□□□□□ -0.27
RNF135-203ENST00000434242 CADPSQ9ULU8 1353 aa13.35□□□□□ -0.27
RNF135-203ENST00000434242 MRC2Q9UBG0 1479 aa13.35□□□□□ -0.27
RNF135-203ENST00000434242 SYNJ1O43426 1573 aa13.34□□□□□ -0.27
RNF135-203ENST00000434242 WDR62O43379 1518 aa13.34□□□□□ -0.27
RNF135-203ENST00000434242 EHMT2Q96KQ7 1210 aa13.32□□□□□ -0.28
RNF135-203ENST00000434242 SOGA1O94964 1423 aa13.3□□□□□ -0.28
RNF135-203ENST00000434242 EEA1Q15075 1411 aa13.29□□□□□ -0.28
RNF135-203ENST00000434242 PRDM2Q13029 1718 aa13.27□□□□□ -0.28
RNF135-203ENST00000434242 TOP2BQ02880 1626 aa13.27□□□□□ -0.29
RNF135-203ENST00000434242 CSRNP3Q8WYN3 585 aa13.25□□□□□ -0.29
RNF135-203ENST00000434242 BIVM-ERCC5R4GMW8 1640 aa13.24□□□□□ -0.29
RNF135-203ENST00000434242 RUSC2Q8N2Y8 1516 aa13.24□□□□□ -0.29
RNF135-203ENST00000434242 CUX1P39880 1505 aa13.23□□□□□ -0.29
RNF135-203ENST00000434242 CEP164Q9UPV0 1460 aa13.23□□□□□ -0.29
RNF135-203ENST00000434242 FANCD2Q9BXW9 1451 aa13.21□□□□□ -0.3
RNF135-203ENST00000434242 OSCARQ8IYS5 282 aa13.16□□□□□ -0.3
RNF135-203ENST00000434242 UBTFP17480 764 aaKnown RBP13.13□□□□□ -0.31
RNF135-203ENST00000434242 GOLGA3Q08378 1498 aa13.11□□□□□ -0.31
RNF135-203ENST00000434242 KIF27Q86VH2 1401 aa13.1□□□□□ -0.31
RNF135-203ENST00000434242 TNIKQ9UKE5 1360 aa13.09□□□□□ -0.31
RNF135-203ENST00000434242 URB2Q14146 1524 aaKnown RBP13.09□□□□□ -0.31
RNF135-203ENST00000434242 FGD5Q6ZNL6 1462 aa13.09□□□□□ -0.31
RNF135-203ENST00000434242 DNMBPQ6XZF7 1577 aa13.08□□□□□ -0.32
RNF135-203ENST00000434242 KIF21BO75037 1637 aa13.08□□□□□ -0.32
RNF135-203ENST00000434242 TOPBP1Q92547 1522 aa13.07□□□□□ -0.32
RNF135-203ENST00000434242 RIMBP3CA6NJZ7 1639 aa13.03□□□□□ -0.32
RNF135-203ENST00000434242 RIMBP3BA6NNM3 1639 aa13.03□□□□□ -0.32
RNF135-203ENST00000434242 RIMBP3Q9UFD9 1639 aa13.03□□□□□ -0.32
RNF135-203ENST00000434242 CEP162Q5TB80 1403 aa13.03□□□□□ -0.32
RNF135-203ENST00000434242 RAPGEF2Q9Y4G8 1499 aa13.01□□□□□ -0.33
RNF135-203ENST00000434242 POLA1P09884 1462 aaPredicted RBP12.99□□□□□ -0.33
RNF135-203ENST00000434242 PRXQ9BXM0 1461 aa12.99□□□□□ -0.33
RNF135-203ENST00000434242 RAD54L2Q9Y4B4 1467 aa12.99□□□□□ -0.33
RNF135-203ENST00000434242 ARHGEF11O15085 1522 aa12.98□□□□□ -0.33
RNF135-203ENST00000434242 IFT140Q96RY7 1462 aa12.98□□□□□ -0.33
RNF135-203ENST00000434242 ERICH3Q5RHP9 1530 aa12.97□□□□□ -0.33
RNF135-203ENST00000434242 IGF1RP08069 1367 aa12.96□□□□□ -0.33
RNF135-203ENST00000434242 PCGF6Q9BYE7 350 aa12.96□□□□□ -0.33
RNF135-203ENST00000434242 ABCA10Q8WWZ4 1543 aa12.96□□□□□ -0.33
RNF135-203ENST00000434242 ZNF608Q9ULD9 1512 aaPredicted RBP12.96□□□□□ -0.33
RNF135-203ENST00000434242 TRIM26Q12899 539 aaPredicted RBP12.93□□□□□ -0.34
RNF135-203ENST00000434242 CLIP1P30622 1438 aa12.92□□□□□ -0.34
RNF135-203ENST00000434242 RANGAP1P46060 587 aaPredicted RBP12.92□□□□□ -0.34
RNF135-203ENST00000434242 CARMIL1Q5VZK9 1371 aa12.92□□□□□ -0.34
RNF135-203ENST00000434242 EIF4G3O43432 1585 aaKnown RBP12.9□□□□□ -0.35
RNF135-203ENST00000434242 TDRD9Q8NDG6 1382 aaKnown RBP12.87□□□□□ -0.35
RNF135-203ENST00000434242 PPARGC1BQ86YN6 1023 aaKnown RBP12.87□□□□□ -0.35
RNF135-203ENST00000434242 WDR97A6NE52 1622 aa12.86□□□□□ -0.35
RNF135-203ENST00000434242 CYB5RLQ6IPT4 315 aa12.85□□□□□ -0.35
RNF135-203ENST00000434242 GAPVD1Q14C86 1478 aa12.84□□□□□ -0.35
RNF135-203ENST00000434242 ARAP1Q96P48 1450 aa12.84□□□□□ -0.35
RNF135-203ENST00000434242 TARBP1Q13395 1621 aaKnown RBP12.83□□□□□ -0.36
RNF135-203ENST00000434242 ABCA5Q8WWZ7 1642 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms