RNA–Protein interactions for RNA: ENST00000432427.2

RAF1-204, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 5

Gene RAF1, Length 1,831 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-204ENST00000432427 NISCHQ9Y2I1 1504 aa18.91■□□□□ 0.62
RAF1-204ENST00000432427 CCDC180Q9P1Z9 1646 aa16.55■□□□□ 0.24
RAF1-204ENST00000432427 AEBP2Q6ZN18 517 aaPredicted RBP15.86■□□□□ 0.13
RAF1-204ENST00000432427 ZCCHC6Q5VYS8 1495 aaKnown RBP15.86■□□□□ 0.13
RAF1-204ENST00000432427 DCAF8L2P0C7V8 631 aa15.79■□□□□ 0.12
RAF1-204ENST00000432427 ABCC9O60706 1549 aa15.75■□□□□ 0.11
RAF1-204ENST00000432427 CHIC1Q5VXU3 224 aa15.68■□□□□ 0.1
RAF1-204ENST00000432427 DCAF1Q9Y4B6 1507 aa15.61■□□□□ 0.09
RAF1-204ENST00000432427 SHROOM4Q9ULL8 1493 aa15.46■□□□□ 0.07
RAF1-204ENST00000432427 MYO15BQ96JP2 1530 aa15.45■□□□□ 0.06
RAF1-204ENST00000432427 NACADO15069 1562 aa15.43■□□□□ 0.06
RAF1-204ENST00000432427 RB1CC1Q8TDY2 1594 aa15.35■□□□□ 0.05
RAF1-204ENST00000432427 SCRIBQ14160 1630 aa15.24■□□□□ 0.03
RAF1-204ENST00000432427 UNC13AQ9UPW8 1703 aa14.99□□□□□ -0.01
RAF1-204ENST00000432427 SUPT5HO00267 1087 aaKnown RBP14.85□□□□□ -0.03
RAF1-204ENST00000432427 PABPN1Q86U42 306 aaKnown RBP eCLIP14.84□□□□□ -0.03
RAF1-204ENST00000432427 BICRAQ9NZM4 1560 aa14.8□□□□□ -0.04
RAF1-204ENST00000432427 CECR2Q9BXF3 1484 aa14.69□□□□□ -0.06
RAF1-204ENST00000432427 BAZ1AQ9NRL2 1556 aaPredicted RBP14.65□□□□□ -0.06
RAF1-204ENST00000432427 RSF1Q96T23 1441 aaPredicted RBP14.63□□□□□ -0.07
RAF1-204ENST00000432427 MROH2BQ7Z745 1585 aa14.6□□□□□ -0.07
RAF1-204ENST00000432427 SMARCA4P51532 1647 aa14.57□□□□□ -0.08
RAF1-204ENST00000432427 WIZO95785 1651 aa14.51□□□□□ -0.09
RAF1-204ENST00000432427 EIF4G1Q04637 1599 aaKnown RBP14.42□□□□□ -0.1
RAF1-204ENST00000432427 SMARCA2P51531 1590 aa14.37□□□□□ -0.11
RAF1-204ENST00000432427 TOP2AP11388 1531 aaKnown RBP14.35□□□□□ -0.11
RAF1-204ENST00000432427 PEG3Q9GZU2 1588 aa14.35□□□□□ -0.11
RAF1-204ENST00000432427 ATAD2BQ9ULI0 1458 aa14.33□□□□□ -0.12
RAF1-204ENST00000432427 BAZ1BQ9UIG0 1483 aaKnown RBP14.31□□□□□ -0.12
RAF1-204ENST00000432427 CC2D2AQ9P2K1 1620 aa14.24□□□□□ -0.13
RAF1-204ENST00000432427 HMGXB3Q12766 1538 aa14.21□□□□□ -0.13
RAF1-204ENST00000432427 NCAPD3P42695 1498 aa14.21□□□□□ -0.13
RAF1-204ENST00000432427 CCDC88BA6NC98 1476 aa14.19□□□□□ -0.14
RAF1-204ENST00000432427 TRIM41Q8WV44 630 aa13.97□□□□□ -0.17
RAF1-204ENST00000432427 DNAJC5BQ9UF47 199 aa13.94□□□□□ -0.18
RAF1-204ENST00000432427 ABCC8Q09428 1581 aa13.9□□□□□ -0.18
RAF1-204ENST00000432427 CFTRP13569 1480 aa13.88□□□□□ -0.19
RAF1-204ENST00000432427 CADPSQ9ULU8 1353 aa13.87□□□□□ -0.19
RAF1-204ENST00000432427 PRDM2Q13029 1718 aa13.85□□□□□ -0.19
RAF1-204ENST00000432427 WRNQ14191 1432 aaPredicted RBP eCLIP13.82□□□□□ -0.22e-6■■□□□ 11.9
RAF1-204ENST00000432427 PHF23Q9BUL5 403 aaPredicted RBP13.79□□□□□ -0.2
RAF1-204ENST00000432427 LAMC3Q9Y6N6 1575 aa13.79□□□□□ -0.2
RAF1-204ENST00000432427 NESP48681 1621 aa13.77□□□□□ -0.21
RAF1-204ENST00000432427 SYNJ1O43426 1573 aa13.74□□□□□ -0.21
RAF1-204ENST00000432427 FANCD2Q9BXW9 1451 aa13.74□□□□□ -0.21
RAF1-204ENST00000432427 FAM9AQ8IZU1 332 aaPredicted RBP13.73□□□□□ -0.21
RAF1-204ENST00000432427 PDS5BQ9NTI5 1447 aa13.71□□□□□ -0.21
RAF1-204ENST00000432427 TOP2BQ02880 1626 aa13.7□□□□□ -0.22
RAF1-204ENST00000432427 CEP164Q9UPV0 1460 aa13.68□□□□□ -0.22
RAF1-204ENST00000432427 BIVM-ERCC5R4GMW8 1640 aa13.68□□□□□ -0.22
RAF1-204ENST00000432427 CUX1P39880 1505 aa13.66□□□□□ -0.22
RAF1-204ENST00000432427 KIF21AQ7Z4S6 1674 aa13.62□□□□□ -0.23
RAF1-204ENST00000432427 DNMBPQ6XZF7 1577 aa13.6□□□□□ -0.23
RAF1-204ENST00000432427 SOGA1O94964 1423 aa13.6□□□□□ -0.23
RAF1-204ENST00000432427 EEA1Q15075 1411 aa13.6□□□□□ -0.23
RAF1-204ENST00000432427 ERCC6Q03468 1493 aa13.58□□□□□ -0.24
RAF1-204ENST00000432427 EHMT2Q96KQ7 1210 aa13.57□□□□□ -0.24
RAF1-204ENST00000432427 TOPBP1Q92547 1522 aa13.56□□□□□ -0.24
RAF1-204ENST00000432427 LOC105371045A0A1W2PR82 267 aa13.56□□□□□ -0.24
RAF1-204ENST00000432427 FGD5Q6ZNL6 1462 aa13.56□□□□□ -0.24
RAF1-204ENST00000432427 URB2Q14146 1524 aaKnown RBP13.53□□□□□ -0.24
RAF1-204ENST00000432427 RUSC2Q8N2Y8 1516 aa13.53□□□□□ -0.24
RAF1-204ENST00000432427 CSRNP3Q8WYN3 585 aa13.52□□□□□ -0.25
RAF1-204ENST00000432427 MRC2Q9UBG0 1479 aa13.52□□□□□ -0.25
RAF1-204ENST00000432427 KIF27Q86VH2 1401 aa13.5□□□□□ -0.25
RAF1-204ENST00000432427 POLA1P09884 1462 aaPredicted RBP13.49□□□□□ -0.25
RAF1-204ENST00000432427 SENP3Q9H4L4 574 aaPredicted RBP13.48□□□□□ -0.25
RAF1-204ENST00000432427 CUX2O14529 1486 aa13.48□□□□□ -0.25
RAF1-204ENST00000432427 RAD54L2Q9Y4B4 1467 aa13.45□□□□□ -0.26
RAF1-204ENST00000432427 WDR62O43379 1518 aa13.42□□□□□ -0.26
RAF1-204ENST00000432427 UBTFP17480 764 aaKnown RBP13.41□□□□□ -0.26
RAF1-204ENST00000432427 GOLGA3Q08378 1498 aa13.41□□□□□ -0.26
RAF1-204ENST00000432427 ABCA10Q8WWZ4 1543 aa13.41□□□□□ -0.26
RAF1-204ENST00000432427 KIF21BO75037 1637 aa13.4□□□□□ -0.26
RAF1-204ENST00000432427 THOC2Q8NI27 1593 aaKnown RBP13.39□□□□□ -0.27
RAF1-204ENST00000432427 WDR97A6NE52 1622 aa13.36□□□□□ -0.27
RAF1-204ENST00000432427 IFT140Q96RY7 1462 aa13.34□□□□□ -0.27
RAF1-204ENST00000432427 TDRD9Q8NDG6 1382 aaKnown RBP13.34□□□□□ -0.27
RAF1-204ENST00000432427 TARBP1Q13395 1621 aaKnown RBP13.34□□□□□ -0.27
RAF1-204ENST00000432427 RAPGEF2Q9Y4G8 1499 aa13.33□□□□□ -0.28
RAF1-204ENST00000432427 ERICH3Q5RHP9 1530 aa13.32□□□□□ -0.28
RAF1-204ENST00000432427 GAPVD1Q14C86 1478 aa13.32□□□□□ -0.28
RAF1-204ENST00000432427 IGF1RP08069 1367 aa13.32□□□□□ -0.28
RAF1-204ENST00000432427 PRXQ9BXM0 1461 aa13.32□□□□□ -0.28
RAF1-204ENST00000432427 TNIKQ9UKE5 1360 aa13.31□□□□□ -0.28
RAF1-204ENST00000432427 ABCA5Q8WWZ7 1642 aa13.31□□□□□ -0.28
RAF1-204ENST00000432427 DNAJC5Q9H3Z4 198 aa13.3□□□□□ -0.28
RAF1-204ENST00000432427 CARMIL1Q5VZK9 1371 aa13.29□□□□□ -0.28
RAF1-204ENST00000432427 CUL7Q14999 1698 aa13.29□□□□□ -0.28
RAF1-204ENST00000432427 CEP162Q5TB80 1403 aa13.26□□□□□ -0.29
RAF1-204ENST00000432427 PBRM1Q86U86 1689 aa13.26□□□□□ -0.29
RAF1-204ENST00000432427 AQRO60306 1485 aaKnown RBP eCLIP13.26□□□□□ -0.295e-8■■■■■ 32.4
RAF1-204ENST00000432427 RANGAP1P46060 587 aaPredicted RBP13.25□□□□□ -0.29
RAF1-204ENST00000432427 ZNF608Q9ULD9 1512 aaPredicted RBP13.24□□□□□ -0.29
RAF1-204ENST00000432427 GRIN2BQ13224 1484 aa13.23□□□□□ -0.29
RAF1-204ENST00000432427 EIF4G3O43432 1585 aaKnown RBP13.23□□□□□ -0.29
RAF1-204ENST00000432427 CLIP1P30622 1438 aa13.19□□□□□ -0.3
RAF1-204ENST00000432427 ADAMTS12P58397 1594 aa13.17□□□□□ -0.3
RAF1-204ENST00000432427 FHAD1B1AJZ9 1412 aa13.16□□□□□ -0.3
RAF1-204ENST00000432427 SNAPC4Q5SXM2 1469 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms