RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 NISCHQ9Y2I1 1504 aa44.12■■■■■ 4.65
RFTN1-202ENST00000431547 CCDC180Q9P1Z9 1646 aa38.99■■■■□ 3.83
RFTN1-202ENST00000431547 ABCC9O60706 1549 aa37.89■■■■□ 3.66
RFTN1-202ENST00000431547 ZCCHC6Q5VYS8 1495 aaKnown RBP36.81■■■■□ 3.48
RFTN1-202ENST00000431547 DCAF8L2P0C7V8 631 aa36.76■■■■□ 3.48
RFTN1-202ENST00000431547 NACADO15069 1562 aa36.65■■■■□ 3.46
RFTN1-202ENST00000431547 RB1CC1Q8TDY2 1594 aa36.58■■■■□ 3.45
RFTN1-202ENST00000431547 MYO15BQ96JP2 1530 aa36.58■■■■□ 3.45
RFTN1-202ENST00000431547 DCAF1Q9Y4B6 1507 aa36.54■■■■□ 3.44
RFTN1-202ENST00000431547 UNC13AQ9UPW8 1703 aa35.61■■■■□ 3.29
RFTN1-202ENST00000431547 SCRIBQ14160 1630 aa35.6■■■■□ 3.29
RFTN1-202ENST00000431547 PABPN1Q86U42 306 aaKnown RBP eCLIP35.52■■■■□ 3.28
RFTN1-202ENST00000431547 BICRAQ9NZM4 1560 aa35.47■■■■□ 3.27
RFTN1-202ENST00000431547 SHROOM4Q9ULL8 1493 aa35.16■■■■□ 3.22
RFTN1-202ENST00000431547 DNAJC5BQ9UF47 199 aa34.55■■■■□ 3.12
RFTN1-202ENST00000431547 EIF4G1Q04637 1599 aaKnown RBP34.5■■■■□ 3.11
RFTN1-202ENST00000431547 CECR2Q9BXF3 1484 aa34.33■■■■□ 3.09
RFTN1-202ENST00000431547 CC2D2AQ9P2K1 1620 aa34.26■■■■□ 3.07
RFTN1-202ENST00000431547 BAZ1AQ9NRL2 1556 aaPredicted RBP34.15■■■■□ 3.06
RFTN1-202ENST00000431547 SMARCA4P51532 1647 aa34.11■■■■□ 3.05
RFTN1-202ENST00000431547 MROH2BQ7Z745 1585 aa33.99■■■■□ 3.03
RFTN1-202ENST00000431547 ATAD2BQ9ULI0 1458 aa33.91■■■■□ 3.02
RFTN1-202ENST00000431547 NCAPD3P42695 1498 aa33.87■■■■□ 3.01
RFTN1-202ENST00000431547 SMARCA2P51531 1590 aa33.85■■■■□ 3.01
RFTN1-202ENST00000431547 PEG3Q9GZU2 1588 aa33.81■■■■□ 3
RFTN1-202ENST00000431547 RSF1Q96T23 1441 aaPredicted RBP33.77■■■■□ 3
RFTN1-202ENST00000431547 HMGXB3Q12766 1538 aa33.67■■■□□ 2.98
RFTN1-202ENST00000431547 BAZ1BQ9UIG0 1483 aaKnown RBP33.62■■■□□ 2.97
RFTN1-202ENST00000431547 WIZO95785 1651 aa33.58■■■□□ 2.97
RFTN1-202ENST00000431547 TOP2AP11388 1531 aaKnown RBP33.29■■■□□ 2.92
RFTN1-202ENST00000431547 SUPT5HO00267 1087 aaKnown RBP33.16■■■□□ 2.9
RFTN1-202ENST00000431547 CCDC88BA6NC98 1476 aa32.94■■■□□ 2.86
RFTN1-202ENST00000431547 CADPSQ9ULU8 1353 aa32.9■■■□□ 2.86
RFTN1-202ENST00000431547 NESP48681 1621 aa32.88■■■□□ 2.85
RFTN1-202ENST00000431547 LAMC3Q9Y6N6 1575 aa32.85■■■□□ 2.85
RFTN1-202ENST00000431547 CFTRP13569 1480 aa32.75■■■□□ 2.83
RFTN1-202ENST00000431547 PDS5BQ9NTI5 1447 aa32.68■■■□□ 2.82
RFTN1-202ENST00000431547 ERCC6Q03468 1493 aa32.64■■■□□ 2.82
RFTN1-202ENST00000431547 FANCD2Q9BXW9 1451 aa32.48■■■□□ 2.79
RFTN1-202ENST00000431547 KIF21AQ7Z4S6 1674 aa32.4■■■□□ 2.78
RFTN1-202ENST00000431547 CEP164Q9UPV0 1460 aa32.39■■■□□ 2.78
RFTN1-202ENST00000431547 PRDM2Q13029 1718 aa32.34■■■□□ 2.77
RFTN1-202ENST00000431547 MRC2Q9UBG0 1479 aa32.29■■■□□ 2.76
RFTN1-202ENST00000431547 THOC2Q8NI27 1593 aaKnown RBP32.27■■■□□ 2.76
RFTN1-202ENST00000431547 CUX2O14529 1486 aa32.19■■■□□ 2.74
RFTN1-202ENST00000431547 WDR62O43379 1518 aa32.15■■■□□ 2.74
RFTN1-202ENST00000431547 URB2Q14146 1524 aaKnown RBP32.12■■■□□ 2.73
RFTN1-202ENST00000431547 ABCC8Q09428 1581 aa32.04■■■□□ 2.72
RFTN1-202ENST00000431547 TOPBP1Q92547 1522 aa31.99■■■□□ 2.71
RFTN1-202ENST00000431547 DNMBPQ6XZF7 1577 aa31.95■■■□□ 2.71
RFTN1-202ENST00000431547 CUX1P39880 1505 aa31.86■■■□□ 2.69
RFTN1-202ENST00000431547 WRNQ14191 1432 aaPredicted RBP eCLIP31.82■■■□□ 2.68
RFTN1-202ENST00000431547 POLA1P09884 1462 aaPredicted RBP31.74■■■□□ 2.67
RFTN1-202ENST00000431547 IFT140Q96RY7 1462 aa31.72■■■□□ 2.67
RFTN1-202ENST00000431547 FGD5Q6ZNL6 1462 aa31.7■■■□□ 2.66
RFTN1-202ENST00000431547 TOP2BQ02880 1626 aa31.66■■■□□ 2.66
RFTN1-202ENST00000431547 SOGA1O94964 1423 aa31.66■■■□□ 2.66
RFTN1-202ENST00000431547 SYNJ1O43426 1573 aa31.65■■■□□ 2.66
RFTN1-202ENST00000431547 BIVM-ERCC5R4GMW8 1640 aa31.62■■■□□ 2.65
RFTN1-202ENST00000431547 RAD54L2Q9Y4B4 1467 aa31.6■■■□□ 2.65
RFTN1-202ENST00000431547 TARBP1Q13395 1621 aaKnown RBP31.58■■■□□ 2.65
RFTN1-202ENST00000431547 ZNF608Q9ULD9 1512 aaPredicted RBP31.53■■■□□ 2.64
RFTN1-202ENST00000431547 ABCA10Q8WWZ4 1543 aa31.44■■■□□ 2.62
RFTN1-202ENST00000431547 TDRD9Q8NDG6 1382 aaKnown RBP31.43■■■□□ 2.62
RFTN1-202ENST00000431547 AQRO60306 1485 aaKnown RBP eCLIP31.42■■■□□ 2.62
RFTN1-202ENST00000431547 WDR97A6NE52 1622 aa31.36■■■□□ 2.61
RFTN1-202ENST00000431547 EIF4G3O43432 1585 aaKnown RBP31.36■■■□□ 2.61
RFTN1-202ENST00000431547 TRIM41Q8WV44 630 aa31.34■■■□□ 2.61
RFTN1-202ENST00000431547 GAPVD1Q14C86 1478 aa31.27■■■□□ 2.6
RFTN1-202ENST00000431547 GRIN2BQ13224 1484 aa31.23■■■□□ 2.59
RFTN1-202ENST00000431547 ABCA5Q8WWZ7 1642 aa31.22■■■□□ 2.59
RFTN1-202ENST00000431547 CHIC1Q5VXU3 224 aa31.17■■■□□ 2.58
RFTN1-202ENST00000431547 KIF27Q86VH2 1401 aa31.14■■■□□ 2.58
RFTN1-202ENST00000431547 SNAPC4Q5SXM2 1469 aa31.1■■■□□ 2.57
RFTN1-202ENST00000431547 MAGI1Q96QZ7 1491 aaPredicted RBP31.09■■■□□ 2.57
RFTN1-202ENST00000431547 ERICH3Q5RHP9 1530 aa31.05■■■□□ 2.56
RFTN1-202ENST00000431547 PBRM1Q86U86 1689 aa31.05■■■□□ 2.56
RFTN1-202ENST00000431547 IGF1RP08069 1367 aa31.01■■■□□ 2.55
RFTN1-202ENST00000431547 FBLN2P98095 1184 aa30.99■■■□□ 2.55
RFTN1-202ENST00000431547 OSCARQ8IYS5 282 aa30.99■■■□□ 2.55
RFTN1-202ENST00000431547 SYNJ2O15056 1496 aa30.98■■■□□ 2.55
RFTN1-202ENST00000431547 CHMP7Q8WUX9 453 aaPredicted RBP30.98■■■□□ 2.55
RFTN1-202ENST00000431547 FHAD1B1AJZ9 1412 aa30.94■■■□□ 2.54
RFTN1-202ENST00000431547 RUSC2Q8N2Y8 1516 aa30.93■■■□□ 2.54
RFTN1-202ENST00000431547 ADAMTS12P58397 1594 aa30.89■■■□□ 2.54
RFTN1-202ENST00000431547 DNAJC5Q9H3Z4 198 aa30.88■■■□□ 2.53
RFTN1-202ENST00000431547 CHD1O14646 1710 aa30.84■■■□□ 2.53
RFTN1-202ENST00000431547 GRIN2AQ12879 1464 aa30.81■■■□□ 2.52
RFTN1-202ENST00000431547 CARMIL1Q5VZK9 1371 aa30.8■■■□□ 2.52
RFTN1-202ENST00000431547 CUL7Q14999 1698 aa30.78■■■□□ 2.52
RFTN1-202ENST00000431547 EEA1Q15075 1411 aa30.77■■■□□ 2.52
RFTN1-202ENST00000431547 CSRNP3Q8WYN3 585 aa30.72■■■□□ 2.51
RFTN1-202ENST00000431547 NUP160Q12769 1436 aa30.68■■■□□ 2.5
RFTN1-202ENST00000431547 RAPGEF2Q9Y4G8 1499 aa30.63■■■□□ 2.49
RFTN1-202ENST00000431547 FAM9AQ8IZU1 332 aaPredicted RBP30.63■■■□□ 2.49
RFTN1-202ENST00000431547 PRXQ9BXM0 1461 aa30.63■■■□□ 2.49
RFTN1-202ENST00000431547 CLASP1Q7Z460 1538 aa30.62■■■□□ 2.49
RFTN1-202ENST00000431547 CEP170Q5SW79 1584 aa30.6■■■□□ 2.49
RFTN1-202ENST00000431547 KIAA0586Q9BVV6 1533 aa30.48■■■□□ 2.47
RFTN1-202ENST00000431547 JPH4Q96JJ6 628 aa30.42■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms