RNA–Protein interactions for RNA: ENST00000431329.5

GAPVD1-208, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-208ENST00000431329 NISCHQ9Y2I1 1504 aa14.91□□□□□ -0.02
GAPVD1-208ENST00000431329 CCDC180Q9P1Z9 1646 aa12.75□□□□□ -0.37
GAPVD1-208ENST00000431329 SHROOM4Q9ULL8 1493 aa12.74□□□□□ -0.37
GAPVD1-208ENST00000431329 ZCCHC6Q5VYS8 1495 aaKnown RBP12.57□□□□□ -0.4
GAPVD1-208ENST00000431329 DCAF8L2P0C7V8 631 aa12.56□□□□□ -0.4
GAPVD1-208ENST00000431329 SUPT5HO00267 1087 aaKnown RBP12.35□□□□□ -0.43
GAPVD1-208ENST00000431329 DCAF1Q9Y4B6 1507 aa12.14□□□□□ -0.47
GAPVD1-208ENST00000431329 ABCC9O60706 1549 aa12.1□□□□□ -0.47
GAPVD1-208ENST00000431329 SCRIBQ14160 1630 aa12.04□□□□□ -0.48
GAPVD1-208ENST00000431329 MYO15BQ96JP2 1530 aa11.84□□□□□ -0.51
GAPVD1-208ENST00000431329 CHIC1Q5VXU3 224 aa11.83□□□□□ -0.52
GAPVD1-208ENST00000431329 NACADO15069 1562 aa11.81□□□□□ -0.52
GAPVD1-208ENST00000431329 RSF1Q96T23 1441 aaPredicted RBP11.73□□□□□ -0.53
GAPVD1-208ENST00000431329 CECR2Q9BXF3 1484 aa11.71□□□□□ -0.53
GAPVD1-208ENST00000431329 RB1CC1Q8TDY2 1594 aa11.7□□□□□ -0.54
GAPVD1-208ENST00000431329 MROH2BQ7Z745 1585 aa11.63□□□□□ -0.55
GAPVD1-208ENST00000431329 UNC13AQ9UPW8 1703 aa11.63□□□□□ -0.55
GAPVD1-208ENST00000431329 WIZO95785 1651 aa11.6□□□□□ -0.55
GAPVD1-208ENST00000431329 LOC105371045A0A1W2PR82 267 aa11.55□□□□□ -0.56
GAPVD1-208ENST00000431329 PABPN1Q86U42 306 aaKnown RBP eCLIP11.55□□□□□ -0.56
GAPVD1-208ENST00000431329 BAZ1AQ9NRL2 1556 aaPredicted RBP11.46□□□□□ -0.58
GAPVD1-208ENST00000431329 FAM9AQ8IZU1 332 aaPredicted RBP11.46□□□□□ -0.58
GAPVD1-208ENST00000431329 EHMT2Q96KQ7 1210 aa11.46□□□□□ -0.58
GAPVD1-208ENST00000431329 TRIM41Q8WV44 630 aa11.45□□□□□ -0.58
GAPVD1-208ENST00000431329 SMARCA4P51532 1647 aa11.43□□□□□ -0.58
GAPVD1-208ENST00000431329 BICRAQ9NZM4 1560 aa11.43□□□□□ -0.58
GAPVD1-208ENST00000431329 TOP2AP11388 1531 aaKnown RBP11.34□□□□□ -0.59
GAPVD1-208ENST00000431329 PCGF6Q9BYE7 350 aa11.33□□□□□ -0.6
GAPVD1-208ENST00000431329 CCDC88BA6NC98 1476 aa11.3□□□□□ -0.6
GAPVD1-208ENST00000431329 SMARCA2P51531 1590 aa11.29□□□□□ -0.6
GAPVD1-208ENST00000431329 EIF4G1Q04637 1599 aaKnown RBP11.29□□□□□ -0.6
GAPVD1-208ENST00000431329 ABCC8Q09428 1581 aa11.29□□□□□ -0.6
GAPVD1-208ENST00000431329 HRCP23327 699 aa11.25□□□□□ -0.61
GAPVD1-208ENST00000431329 SLC24A1O60721 1099 aa11.18□□□□□ -0.62
GAPVD1-208ENST00000431329 ATAD2BQ9ULI0 1458 aa11.16□□□□□ -0.62
GAPVD1-208ENST00000431329 BAZ1BQ9UIG0 1483 aaKnown RBP11.14□□□□□ -0.63
GAPVD1-208ENST00000431329 PEG3Q9GZU2 1588 aa11.14□□□□□ -0.63
GAPVD1-208ENST00000431329 PPARGC1BQ86YN6 1023 aaKnown RBP11.12□□□□□ -0.63
GAPVD1-208ENST00000431329 SOGA1O94964 1423 aa11.11□□□□□ -0.63
GAPVD1-208ENST00000431329 RUSC2Q8N2Y8 1516 aa11.09□□□□□ -0.63
GAPVD1-208ENST00000431329 TRIM26Q12899 539 aaPredicted RBP11.06□□□□□ -0.64
GAPVD1-208ENST00000431329 SYNJ1O43426 1573 aa11.04□□□□□ -0.64
GAPVD1-208ENST00000431329 WRNQ14191 1432 aaPredicted RBP eCLIP11.03□□□□□ -0.647e-6■■■■■ 39.7
GAPVD1-208ENST00000431329 TTBK1Q5TCY1 1321 aaPredicted RBP11.02□□□□□ -0.65
GAPVD1-208ENST00000431329 UBTFP17480 764 aaKnown RBP10.96□□□□□ -0.65
GAPVD1-208ENST00000431329 CSRNP3Q8WYN3 585 aa10.96□□□□□ -0.66
GAPVD1-208ENST00000431329 CEP162Q5TB80 1403 aa10.93□□□□□ -0.66
GAPVD1-208ENST00000431329 HMGXB3Q12766 1538 aa10.93□□□□□ -0.66
GAPVD1-208ENST00000431329 NCAPD3P42695 1498 aa10.93□□□□□ -0.66
GAPVD1-208ENST00000431329 RANGAP1P46060 587 aaPredicted RBP10.92□□□□□ -0.66
GAPVD1-208ENST00000431329 EEA1Q15075 1411 aa10.87□□□□□ -0.67
GAPVD1-208ENST00000431329 GOLGA3Q08378 1498 aa10.87□□□□□ -0.67
GAPVD1-208ENST00000431329 TOP2BQ02880 1626 aa10.86□□□□□ -0.67
GAPVD1-208ENST00000431329 CC2D2AQ9P2K1 1620 aa10.86□□□□□ -0.67
GAPVD1-208ENST00000431329 TNIKQ9UKE5 1360 aa10.86□□□□□ -0.67
GAPVD1-208ENST00000431329 CUX1P39880 1505 aa10.84□□□□□ -0.67
GAPVD1-208ENST00000431329 RAPGEF2Q9Y4G8 1499 aa10.83□□□□□ -0.68
GAPVD1-208ENST00000431329 BIVM-ERCC5R4GMW8 1640 aa10.83□□□□□ -0.68
GAPVD1-208ENST00000431329 CEP164Q9UPV0 1460 aa10.82□□□□□ -0.68
GAPVD1-208ENST00000431329 CFTRP13569 1480 aa10.81□□□□□ -0.68
GAPVD1-208ENST00000431329 KIF21BO75037 1637 aa10.8□□□□□ -0.68
GAPVD1-208ENST00000431329 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.77□□□□□ -0.69
GAPVD1-208ENST00000431329 PRDM2Q13029 1718 aa10.76□□□□□ -0.69
GAPVD1-208ENST00000431329 CLIP1P30622 1438 aa10.76□□□□□ -0.69
GAPVD1-208ENST00000431329 ZEB1P37275 1124 aaPredicted RBP10.75□□□□□ -0.69
GAPVD1-208ENST00000431329 CADPSQ9ULU8 1353 aa10.74□□□□□ -0.69
GAPVD1-208ENST00000431329 NESP48681 1621 aa10.73□□□□□ -0.69
GAPVD1-208ENST00000431329 DNAJC5BQ9UF47 199 aa10.73□□□□□ -0.69
GAPVD1-208ENST00000431329 KIF27Q86VH2 1401 aa10.69□□□□□ -0.7
GAPVD1-208ENST00000431329 CUX2O14529 1486 aa10.69□□□□□ -0.7
GAPVD1-208ENST00000431329 CCER1Q8TC90 406 aaPredicted RBP10.68□□□□□ -0.7
GAPVD1-208ENST00000431329 FGD5Q6ZNL6 1462 aa10.68□□□□□ -0.7
GAPVD1-208ENST00000431329 PRXQ9BXM0 1461 aa10.68□□□□□ -0.7
GAPVD1-208ENST00000431329 FANCD2Q9BXW9 1451 aa10.67□□□□□ -0.7
GAPVD1-208ENST00000431329 VPS8Q8N3P4 1428 aa10.66□□□□□ -0.7
GAPVD1-208ENST00000431329 ERICH3Q5RHP9 1530 aa10.64□□□□□ -0.71
GAPVD1-208ENST00000431329 HNRNPUL2Q1KMD3 747 aaKnown RBP10.64□□□□□ -0.71
GAPVD1-208ENST00000431329 ARAP1Q96P48 1450 aa10.63□□□□□ -0.71
GAPVD1-208ENST00000431329 RAD54L2Q9Y4B4 1467 aa10.63□□□□□ -0.71
GAPVD1-208ENST00000431329 APLP2Q06481 763 aa10.62□□□□□ -0.71
GAPVD1-208ENST00000431329 IGF1RP08069 1367 aa10.6□□□□□ -0.71
GAPVD1-208ENST00000431329 TOPBP1Q92547 1522 aa10.58□□□□□ -0.72
GAPVD1-208ENST00000431329 DNMBPQ6XZF7 1577 aa10.57□□□□□ -0.72
GAPVD1-208ENST00000431329 KANK4Q5T7N3 995 aaPredicted RBP10.57□□□□□ -0.72
GAPVD1-208ENST00000431329 POLA1P09884 1462 aaPredicted RBP10.57□□□□□ -0.72
GAPVD1-208ENST00000431329 ARHGAP35Q9NRY4 1499 aa10.56□□□□□ -0.72
GAPVD1-208ENST00000431329 CARMIL1Q5VZK9 1371 aa10.56□□□□□ -0.72
GAPVD1-208ENST00000431329 P3H3Q8IVL6 736 aa10.56□□□□□ -0.72
GAPVD1-208ENST00000431329 KIF21AQ7Z4S6 1674 aa10.55□□□□□ -0.72
GAPVD1-208ENST00000431329 URB2Q14146 1524 aaKnown RBP10.54□□□□□ -0.72
GAPVD1-208ENST00000431329 LAMC3Q9Y6N6 1575 aa10.52□□□□□ -0.73
GAPVD1-208ENST00000431329 TDRD9Q8NDG6 1382 aaKnown RBP10.5□□□□□ -0.73
GAPVD1-208ENST00000431329 ATP1B4Q9UN42 357 aaPredicted RBP10.5□□□□□ -0.73
GAPVD1-208ENST00000431329 ABCA10Q8WWZ4 1543 aa10.49□□□□□ -0.73
GAPVD1-208ENST00000431329 ITGAEP38570 1179 aa10.48□□□□□ -0.73
GAPVD1-208ENST00000431329 WDR97A6NE52 1622 aa10.46□□□□□ -0.73
GAPVD1-208ENST00000431329 FHOD3Q2V2M9 1422 aa10.45□□□□□ -0.74
GAPVD1-208ENST00000431329 PDS5BQ9NTI5 1447 aa10.45□□□□□ -0.74
GAPVD1-208ENST00000431329 PCF11O94913 1555 aaKnown RBP10.43□□□□□ -0.74
GAPVD1-208ENST00000431329 CTTNBP2Q8WZ74 1663 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms