RNA–Protein interactions for RNA: ENST00000431016.5

PCYT1A-206, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCYT1A, Length 1,482 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-206ENST00000431016 NISCHQ9Y2I1 1504 aa29.13■■■□□ 2.25
PCYT1A-206ENST00000431016 CCDC180Q9P1Z9 1646 aa25.75■■□□□ 1.71
PCYT1A-206ENST00000431016 ABCC9O60706 1549 aa25.04■■□□□ 1.6
PCYT1A-206ENST00000431016 DCAF8L2P0C7V8 631 aa24.35■■□□□ 1.49
PCYT1A-206ENST00000431016 ZCCHC6Q5VYS8 1495 aaKnown RBP24.31■■□□□ 1.48
PCYT1A-206ENST00000431016 NACADO15069 1562 aa24.22■■□□□ 1.47
PCYT1A-206ENST00000431016 RB1CC1Q8TDY2 1594 aa24.18■■□□□ 1.46
PCYT1A-206ENST00000431016 MYO15BQ96JP2 1530 aa24.15■■□□□ 1.46
PCYT1A-206ENST00000431016 DCAF1Q9Y4B6 1507 aa24.12■■□□□ 1.45
PCYT1A-206ENST00000431016 SCRIBQ14160 1630 aa23.53■■□□□ 1.36
PCYT1A-206ENST00000431016 UNC13AQ9UPW8 1703 aa23.52■■□□□ 1.36
PCYT1A-206ENST00000431016 PABPN1Q86U42 306 aaKnown RBP eCLIP23.49■■□□□ 1.35
PCYT1A-206ENST00000431016 BICRAQ9NZM4 1560 aa23.39■■□□□ 1.33
PCYT1A-206ENST00000431016 SHROOM4Q9ULL8 1493 aa23.24■■□□□ 1.31
PCYT1A-206ENST00000431016 DNAJC5BQ9UF47 199 aa22.79■■□□□ 1.24
PCYT1A-206ENST00000431016 EIF4G1Q04637 1599 aaKnown RBP22.79■■□□□ 1.24
PCYT1A-206ENST00000431016 CECR2Q9BXF3 1484 aa22.66■■□□□ 1.22
PCYT1A-206ENST00000431016 CC2D2AQ9P2K1 1620 aa22.63■■□□□ 1.21
PCYT1A-206ENST00000431016 BAZ1AQ9NRL2 1556 aaPredicted RBP22.57■■□□□ 1.2
PCYT1A-206ENST00000431016 SMARCA4P51532 1647 aa22.53■■□□□ 1.2
PCYT1A-206ENST00000431016 MROH2BQ7Z745 1585 aa22.44■■□□□ 1.18
PCYT1A-206ENST00000431016 ATAD2BQ9ULI0 1458 aa22.39■■□□□ 1.18
PCYT1A-206ENST00000431016 SMARCA2P51531 1590 aa22.38■■□□□ 1.17
PCYT1A-206ENST00000431016 NCAPD3P42695 1498 aa22.36■■□□□ 1.17
PCYT1A-206ENST00000431016 PEG3Q9GZU2 1588 aa22.32■■□□□ 1.16
PCYT1A-206ENST00000431016 RSF1Q96T23 1441 aaPredicted RBP22.3■■□□□ 1.16
PCYT1A-206ENST00000431016 HMGXB3Q12766 1538 aa22.24■■□□□ 1.15
PCYT1A-206ENST00000431016 BAZ1BQ9UIG0 1483 aaKnown RBP22.23■■□□□ 1.15
PCYT1A-206ENST00000431016 WIZO95785 1651 aa22.18■■□□□ 1.14
PCYT1A-206ENST00000431016 TOP2AP11388 1531 aaKnown RBP21.99■■□□□ 1.11
PCYT1A-206ENST00000431016 SUPT5HO00267 1087 aaKnown RBP21.96■■□□□ 1.11
PCYT1A-206ENST00000431016 CCDC88BA6NC98 1476 aa21.76■■□□□ 1.07
PCYT1A-206ENST00000431016 CADPSQ9ULU8 1353 aa21.75■■□□□ 1.07
PCYT1A-206ENST00000431016 NESP48681 1621 aa21.72■■□□□ 1.07
PCYT1A-206ENST00000431016 LAMC3Q9Y6N6 1575 aa21.71■■□□□ 1.07
PCYT1A-206ENST00000431016 CFTRP13569 1480 aa21.64■■□□□ 1.05
PCYT1A-206ENST00000431016 PDS5BQ9NTI5 1447 aa21.61■■□□□ 1.05
PCYT1A-206ENST00000431016 ERCC6Q03468 1493 aa21.6■■□□□ 1.05
PCYT1A-206ENST00000431016 FANCD2Q9BXW9 1451 aa21.47■■□□□ 1.03
PCYT1A-206ENST00000431016 CEP164Q9UPV0 1460 aa21.41■■□□□ 1.02
PCYT1A-206ENST00000431016 KIF21AQ7Z4S6 1674 aa21.4■■□□□ 1.02
PCYT1A-206ENST00000431016 PRDM2Q13029 1718 aa21.37■■□□□ 1.01
PCYT1A-206ENST00000431016 MRC2Q9UBG0 1479 aa21.34■■□□□ 1.01
PCYT1A-206ENST00000431016 THOC2Q8NI27 1593 aaKnown RBP21.3■■□□□ 1
PCYT1A-206ENST00000431016 CUX2O14529 1486 aa21.27■■□□□ 1
PCYT1A-206ENST00000431016 WDR62O43379 1518 aa21.23■□□□□ 0.99
PCYT1A-206ENST00000431016 URB2Q14146 1524 aaKnown RBP21.21■□□□□ 0.99
PCYT1A-206ENST00000431016 ABCC8Q09428 1581 aa21.19■□□□□ 0.98
PCYT1A-206ENST00000431016 TOPBP1Q92547 1522 aa21.13■□□□□ 0.97
PCYT1A-206ENST00000431016 DNMBPQ6XZF7 1577 aa21.12■□□□□ 0.97
PCYT1A-206ENST00000431016 CUX1P39880 1505 aa21.04■□□□□ 0.96
PCYT1A-206ENST00000431016 WRNQ14191 1432 aaPredicted RBP eCLIP21.04■□□□□ 0.96
PCYT1A-206ENST00000431016 POLA1P09884 1462 aaPredicted RBP20.97■□□□□ 0.95
PCYT1A-206ENST00000431016 IFT140Q96RY7 1462 aa20.97■□□□□ 0.95
PCYT1A-206ENST00000431016 FGD5Q6ZNL6 1462 aa20.95■□□□□ 0.94
PCYT1A-206ENST00000431016 SOGA1O94964 1423 aa20.93■□□□□ 0.94
PCYT1A-206ENST00000431016 TOP2BQ02880 1626 aa20.92■□□□□ 0.94
PCYT1A-206ENST00000431016 SYNJ1O43426 1573 aa20.9■□□□□ 0.94
PCYT1A-206ENST00000431016 BIVM-ERCC5R4GMW8 1640 aa20.88■□□□□ 0.93
PCYT1A-206ENST00000431016 RAD54L2Q9Y4B4 1467 aa20.88■□□□□ 0.93
PCYT1A-206ENST00000431016 TARBP1Q13395 1621 aaKnown RBP20.84■□□□□ 0.93
PCYT1A-206ENST00000431016 ZNF608Q9ULD9 1512 aaPredicted RBP20.83■□□□□ 0.92
PCYT1A-206ENST00000431016 TDRD9Q8NDG6 1382 aaKnown RBP20.78■□□□□ 0.92
PCYT1A-206ENST00000431016 ABCA10Q8WWZ4 1543 aa20.77■□□□□ 0.92
PCYT1A-206ENST00000431016 AQRO60306 1485 aaKnown RBP eCLIP20.76■□□□□ 0.917e-8■■■■□ 23.6
PCYT1A-206ENST00000431016 TRIM41Q8WV44 630 aa20.75■□□□□ 0.91
PCYT1A-206ENST00000431016 WDR97A6NE52 1622 aa20.73■□□□□ 0.91
PCYT1A-206ENST00000431016 EIF4G3O43432 1585 aaKnown RBP20.72■□□□□ 0.91
PCYT1A-206ENST00000431016 GAPVD1Q14C86 1478 aa20.68■□□□□ 0.9
PCYT1A-206ENST00000431016 GRIN2BQ13224 1484 aa20.65■□□□□ 0.9
PCYT1A-206ENST00000431016 ABCA5Q8WWZ7 1642 aa20.62■□□□□ 0.89
PCYT1A-206ENST00000431016 CHIC1Q5VXU3 224 aa20.61■□□□□ 0.89
PCYT1A-206ENST00000431016 KIF27Q86VH2 1401 aa20.6■□□□□ 0.89
PCYT1A-206ENST00000431016 SNAPC4Q5SXM2 1469 aa20.56■□□□□ 0.88
PCYT1A-206ENST00000431016 MAGI1Q96QZ7 1491 aaPredicted RBP20.56■□□□□ 0.88
PCYT1A-206ENST00000431016 FBLN2P98095 1184 aa20.53■□□□□ 0.88
PCYT1A-206ENST00000431016 ERICH3Q5RHP9 1530 aa20.52■□□□□ 0.88
PCYT1A-206ENST00000431016 PBRM1Q86U86 1689 aa20.52■□□□□ 0.87
PCYT1A-206ENST00000431016 CHMP7Q8WUX9 453 aaPredicted RBP20.51■□□□□ 0.87
PCYT1A-206ENST00000431016 OSCARQ8IYS5 282 aa20.5■□□□□ 0.87
PCYT1A-206ENST00000431016 SYNJ2O15056 1496 aa20.48■□□□□ 0.87
PCYT1A-206ENST00000431016 IGF1RP08069 1367 aa20.48■□□□□ 0.87
PCYT1A-206ENST00000431016 FHAD1B1AJZ9 1412 aa20.46■□□□□ 0.87
PCYT1A-206ENST00000431016 ADAMTS12P58397 1594 aa20.41■□□□□ 0.86
PCYT1A-206ENST00000431016 RUSC2Q8N2Y8 1516 aa20.41■□□□□ 0.86
PCYT1A-206ENST00000431016 DNAJC5Q9H3Z4 198 aa20.4■□□□□ 0.86
PCYT1A-206ENST00000431016 CHD1O14646 1710 aa20.38■□□□□ 0.85
PCYT1A-206ENST00000431016 CARMIL1Q5VZK9 1371 aa20.38■□□□□ 0.85
PCYT1A-206ENST00000431016 GRIN2AQ12879 1464 aa20.36■□□□□ 0.85
PCYT1A-206ENST00000431016 EEA1Q15075 1411 aa20.36■□□□□ 0.85
PCYT1A-206ENST00000431016 CUL7Q14999 1698 aa20.35■□□□□ 0.85
PCYT1A-206ENST00000431016 CSRNP3Q8WYN3 585 aa20.31■□□□□ 0.84
PCYT1A-206ENST00000431016 FAM9AQ8IZU1 332 aaPredicted RBP20.28■□□□□ 0.84
PCYT1A-206ENST00000431016 NUP160Q12769 1436 aa20.26■□□□□ 0.83
PCYT1A-206ENST00000431016 RAPGEF2Q9Y4G8 1499 aa20.26■□□□□ 0.83
PCYT1A-206ENST00000431016 PRXQ9BXM0 1461 aa20.23■□□□□ 0.83
PCYT1A-206ENST00000431016 CLASP1Q7Z460 1538 aa20.21■□□□□ 0.83
PCYT1A-206ENST00000431016 CEP170Q5SW79 1584 aa20.21■□□□□ 0.83
PCYT1A-206ENST00000431016 KIAA0586Q9BVV6 1533 aa20.15■□□□□ 0.82
PCYT1A-206ENST00000431016 JPH4Q96JJ6 628 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms