RNA–Protein interactions for RNA: ENST00000430364.1

LINC01149-202, Transcript of long intergenic non-protein coding RNA 1149, humanhuman

TSL 1 (best) BASIC

Gene LINC01149, Length 2,141 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01149-202ENST00000430364 NISCHQ9Y2I1 1504 aa26.47■■□□□ 1.83
LINC01149-202ENST00000430364 CCDC180Q9P1Z9 1646 aa22.68■■□□□ 1.22
LINC01149-202ENST00000430364 ZCCHC6Q5VYS8 1495 aaKnown RBP22.33■■□□□ 1.17
LINC01149-202ENST00000430364 SHROOM4Q9ULL8 1493 aa22.23■■□□□ 1.15
LINC01149-202ENST00000430364 DCAF8L2P0C7V8 631 aa21.91■■□□□ 1.1
LINC01149-202ENST00000430364 DCAF1Q9Y4B6 1507 aa21.74■■□□□ 1.07
LINC01149-202ENST00000430364 SUPT5HO00267 1087 aaKnown RBP21.6■■□□□ 1.05
LINC01149-202ENST00000430364 ABCC9O60706 1549 aa21.33■■□□□ 1.01
LINC01149-202ENST00000430364 MYO15BQ96JP2 1530 aa21.24■□□□□ 0.99
LINC01149-202ENST00000430364 SCRIBQ14160 1630 aa21.17■□□□□ 0.98
LINC01149-202ENST00000430364 NACADO15069 1562 aa21.03■□□□□ 0.96
LINC01149-202ENST00000430364 CHIC1Q5VXU3 224 aa20.89■□□□□ 0.94
LINC01149-202ENST00000430364 RSF1Q96T23 1441 aaPredicted RBP20.8■□□□□ 0.92
LINC01149-202ENST00000430364 RB1CC1Q8TDY2 1594 aa20.75■□□□□ 0.91
LINC01149-202ENST00000430364 CECR2Q9BXF3 1484 aa20.68■□□□□ 0.9
LINC01149-202ENST00000430364 MROH2BQ7Z745 1585 aa20.57■□□□□ 0.88
LINC01149-202ENST00000430364 UNC13AQ9UPW8 1703 aa20.51■□□□□ 0.87
LINC01149-202ENST00000430364 WIZO95785 1651 aa20.44■□□□□ 0.86
LINC01149-202ENST00000430364 BAZ1AQ9NRL2 1556 aaPredicted RBP20.33■□□□□ 0.85
LINC01149-202ENST00000430364 BICRAQ9NZM4 1560 aa20.27■□□□□ 0.84
LINC01149-202ENST00000430364 PABPN1Q86U42 306 aaKnown RBP eCLIP20.25■□□□□ 0.83
LINC01149-202ENST00000430364 LOC105371045A0A1W2PR82 267 aa20.24■□□□□ 0.83
LINC01149-202ENST00000430364 SMARCA4P51532 1647 aa20.24■□□□□ 0.83
LINC01149-202ENST00000430364 TRIM41Q8WV44 630 aa20.15■□□□□ 0.82
LINC01149-202ENST00000430364 TOP2AP11388 1531 aaKnown RBP20.1■□□□□ 0.81
LINC01149-202ENST00000430364 EIF4G1Q04637 1599 aaKnown RBP20.06■□□□□ 0.8
LINC01149-202ENST00000430364 CCDC88BA6NC98 1476 aa20.01■□□□□ 0.79
LINC01149-202ENST00000430364 SMARCA2P51531 1590 aa20■□□□□ 0.79
LINC01149-202ENST00000430364 FAM9AQ8IZU1 332 aaPredicted RBP19.97■□□□□ 0.79
LINC01149-202ENST00000430364 PEG3Q9GZU2 1588 aa19.89■□□□□ 0.77
LINC01149-202ENST00000430364 ABCC8Q09428 1581 aa19.84■□□□□ 0.77
LINC01149-202ENST00000430364 PCGF6Q9BYE7 350 aa19.81■□□□□ 0.76
LINC01149-202ENST00000430364 ATAD2BQ9ULI0 1458 aa19.8■□□□□ 0.76
LINC01149-202ENST00000430364 EHMT2Q96KQ7 1210 aa19.79■□□□□ 0.76
LINC01149-202ENST00000430364 BAZ1BQ9UIG0 1483 aaKnown RBP19.69■□□□□ 0.74
LINC01149-202ENST00000430364 SOGA1O94964 1423 aa19.58■□□□□ 0.72
LINC01149-202ENST00000430364 HRCP23327 699 aa19.58■□□□□ 0.72
LINC01149-202ENST00000430364 TRIM26Q12899 539 aaPredicted RBP19.52■□□□□ 0.72
LINC01149-202ENST00000430364 RUSC2Q8N2Y8 1516 aa19.52■□□□□ 0.72
LINC01149-202ENST00000430364 WRNQ14191 1432 aaPredicted RBP eCLIP19.51■□□□□ 0.71
LINC01149-202ENST00000430364 SYNJ1O43426 1573 aa19.49■□□□□ 0.71
LINC01149-202ENST00000430364 NCAPD3P42695 1498 aa19.48■□□□□ 0.71
LINC01149-202ENST00000430364 HMGXB3Q12766 1538 aa19.44■□□□□ 0.7
LINC01149-202ENST00000430364 CSRNP3Q8WYN3 585 aa19.39■□□□□ 0.69
LINC01149-202ENST00000430364 EEA1Q15075 1411 aa19.36■□□□□ 0.69
LINC01149-202ENST00000430364 PPARGC1BQ86YN6 1023 aaKnown RBP19.32■□□□□ 0.68
LINC01149-202ENST00000430364 DNAJC5BQ9UF47 199 aa19.29■□□□□ 0.68
LINC01149-202ENST00000430364 TNIKQ9UKE5 1360 aa19.28■□□□□ 0.68
LINC01149-202ENST00000430364 CEP162Q5TB80 1403 aa19.28■□□□□ 0.68
LINC01149-202ENST00000430364 TOP2BQ02880 1626 aa19.26■□□□□ 0.67
LINC01149-202ENST00000430364 CC2D2AQ9P2K1 1620 aa19.25■□□□□ 0.67
LINC01149-202ENST00000430364 GOLGA3Q08378 1498 aa19.23■□□□□ 0.67
LINC01149-202ENST00000430364 UBTFP17480 764 aaKnown RBP19.22■□□□□ 0.67
LINC01149-202ENST00000430364 CFTRP13569 1480 aa19.22■□□□□ 0.67
LINC01149-202ENST00000430364 BIVM-ERCC5R4GMW8 1640 aa19.22■□□□□ 0.67
LINC01149-202ENST00000430364 CUX1P39880 1505 aa19.17■□□□□ 0.66
LINC01149-202ENST00000430364 KIF21BO75037 1637 aa19.17■□□□□ 0.66
LINC01149-202ENST00000430364 CEP164Q9UPV0 1460 aa19.16■□□□□ 0.66
LINC01149-202ENST00000430364 RAPGEF2Q9Y4G8 1499 aa19.11■□□□□ 0.65
LINC01149-202ENST00000430364 PRDM2Q13029 1718 aa19.06■□□□□ 0.64
LINC01149-202ENST00000430364 TTBK1Q5TCY1 1321 aaPredicted RBP19.05■□□□□ 0.64
LINC01149-202ENST00000430364 CADPSQ9ULU8 1353 aa19.05■□□□□ 0.64
LINC01149-202ENST00000430364 CLIP1P30622 1438 aa18.99■□□□□ 0.63
LINC01149-202ENST00000430364 PRXQ9BXM0 1461 aa18.98■□□□□ 0.63
LINC01149-202ENST00000430364 RANGAP1P46060 587 aaPredicted RBP18.94■□□□□ 0.62
LINC01149-202ENST00000430364 KIF27Q86VH2 1401 aa18.93■□□□□ 0.62
LINC01149-202ENST00000430364 ERICH3Q5RHP9 1530 aa18.92■□□□□ 0.62
LINC01149-202ENST00000430364 NESP48681 1621 aa18.88■□□□□ 0.61
LINC01149-202ENST00000430364 ZEB1P37275 1124 aaPredicted RBP18.88■□□□□ 0.61
LINC01149-202ENST00000430364 VPS8Q8N3P4 1428 aa18.88■□□□□ 0.61
LINC01149-202ENST00000430364 FGD5Q6ZNL6 1462 aa18.86■□□□□ 0.61
LINC01149-202ENST00000430364 FANCD2Q9BXW9 1451 aa18.86■□□□□ 0.61
LINC01149-202ENST00000430364 CUX2O14529 1486 aa18.84■□□□□ 0.61
LINC01149-202ENST00000430364 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.84■□□□□ 0.61
LINC01149-202ENST00000430364 IGF1RP08069 1367 aa18.8■□□□□ 0.6
LINC01149-202ENST00000430364 ARAP1Q96P48 1450 aa18.79■□□□□ 0.6
LINC01149-202ENST00000430364 DNMBPQ6XZF7 1577 aa18.73■□□□□ 0.59
LINC01149-202ENST00000430364 RAD54L2Q9Y4B4 1467 aa18.73■□□□□ 0.59
LINC01149-202ENST00000430364 TOPBP1Q92547 1522 aa18.72■□□□□ 0.59
LINC01149-202ENST00000430364 CCER1Q8TC90 406 aaPredicted RBP18.71■□□□□ 0.59
LINC01149-202ENST00000430364 POLA1P09884 1462 aaPredicted RBP18.7■□□□□ 0.58
LINC01149-202ENST00000430364 CARMIL1Q5VZK9 1371 aa18.69■□□□□ 0.58
LINC01149-202ENST00000430364 ARHGAP35Q9NRY4 1499 aa18.68■□□□□ 0.58
LINC01149-202ENST00000430364 LAMC3Q9Y6N6 1575 aa18.68■□□□□ 0.58
LINC01149-202ENST00000430364 APLP2Q06481 763 aa18.65■□□□□ 0.58
LINC01149-202ENST00000430364 URB2Q14146 1524 aaKnown RBP18.65■□□□□ 0.58
LINC01149-202ENST00000430364 ABCA10Q8WWZ4 1543 aa18.64■□□□□ 0.57
LINC01149-202ENST00000430364 KANK4Q5T7N3 995 aaPredicted RBP18.61■□□□□ 0.57
LINC01149-202ENST00000430364 HNRNPUL2Q1KMD3 747 aaKnown RBP18.59■□□□□ 0.57
LINC01149-202ENST00000430364 KIF21AQ7Z4S6 1674 aa18.56■□□□□ 0.56
LINC01149-202ENST00000430364 WDR97A6NE52 1622 aa18.54■□□□□ 0.56
LINC01149-202ENST00000430364 PDS5BQ9NTI5 1447 aa18.54■□□□□ 0.56
LINC01149-202ENST00000430364 TDRD9Q8NDG6 1382 aaKnown RBP18.49■□□□□ 0.55
LINC01149-202ENST00000430364 ABCA5Q8WWZ7 1642 aa18.46■□□□□ 0.55
LINC01149-202ENST00000430364 CUL7Q14999 1698 aa18.46■□□□□ 0.55
LINC01149-202ENST00000430364 P3H3Q8IVL6 736 aa18.45■□□□□ 0.54
LINC01149-202ENST00000430364 GAPVD1Q14C86 1478 aa18.41■□□□□ 0.54
LINC01149-202ENST00000430364 TARBP1Q13395 1621 aaKnown RBP18.4■□□□□ 0.54
LINC01149-202ENST00000430364 RRBP1Q9P2E9 1410 aaKnown RBP18.4■□□□□ 0.54
LINC01149-202ENST00000430364 TIAM1Q13009 1591 aa18.39■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms