RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 NISCHQ9Y2I1 1504 aa48.33■■■■■ 5.33
CSNK1E-207ENST00000430335 CCDC180Q9P1Z9 1646 aa42.82■■■■■ 4.44
CSNK1E-207ENST00000430335 ABCC9O60706 1549 aa41.63■■■■■ 4.25
CSNK1E-207ENST00000430335 ZCCHC6Q5VYS8 1495 aaKnown RBP40.32■■■■■ 4.05
CSNK1E-207ENST00000430335 NACADO15069 1562 aa40.24■■■■■ 4.03
CSNK1E-207ENST00000430335 DCAF8L2P0C7V8 631 aa40.21■■■■■ 4.03
CSNK1E-207ENST00000430335 RB1CC1Q8TDY2 1594 aa40.19■■■■■ 4.02
CSNK1E-207ENST00000430335 MYO15BQ96JP2 1530 aa40.14■■■■■ 4.02
CSNK1E-207ENST00000430335 DCAF1Q9Y4B6 1507 aa40.05■■■■■ 4
CSNK1E-207ENST00000430335 UNC13AQ9UPW8 1703 aa39.19■■■■□ 3.86
CSNK1E-207ENST00000430335 SCRIBQ14160 1630 aa39.05■■■■□ 3.84
CSNK1E-207ENST00000430335 BICRAQ9NZM4 1560 aa38.96■■■■□ 3.83
CSNK1E-207ENST00000430335 PABPN1Q86U42 306 aaKnown RBP eCLIP38.96■■■■□ 3.83
CSNK1E-207ENST00000430335 SHROOM4Q9ULL8 1493 aa38.66■■■■□ 3.78
CSNK1E-207ENST00000430335 DNAJC5BQ9UF47 199 aa38■■■■□ 3.67
CSNK1E-207ENST00000430335 EIF4G1Q04637 1599 aaKnown RBP37.91■■■■□ 3.66
CSNK1E-207ENST00000430335 CC2D2AQ9P2K1 1620 aa37.67■■■■□ 3.62
CSNK1E-207ENST00000430335 CECR2Q9BXF3 1484 aa37.6■■■■□ 3.61
CSNK1E-207ENST00000430335 BAZ1AQ9NRL2 1556 aaPredicted RBP37.44■■■■□ 3.58
CSNK1E-207ENST00000430335 SMARCA4P51532 1647 aa37.41■■■■□ 3.58
CSNK1E-207ENST00000430335 MROH2BQ7Z745 1585 aa37.23■■■■□ 3.55
CSNK1E-207ENST00000430335 ATAD2BQ9ULI0 1458 aa37.19■■■■□ 3.54
CSNK1E-207ENST00000430335 NCAPD3P42695 1498 aa37.15■■■■□ 3.54
CSNK1E-207ENST00000430335 SMARCA2P51531 1590 aa37.15■■■■□ 3.54
CSNK1E-207ENST00000430335 PEG3Q9GZU2 1588 aa37.09■■■■□ 3.53
CSNK1E-207ENST00000430335 HMGXB3Q12766 1538 aa36.96■■■■□ 3.51
CSNK1E-207ENST00000430335 RSF1Q96T23 1441 aaPredicted RBP36.93■■■■□ 3.5
CSNK1E-207ENST00000430335 BAZ1BQ9UIG0 1483 aaKnown RBP36.87■■■■□ 3.49
CSNK1E-207ENST00000430335 WIZO95785 1651 aa36.8■■■■□ 3.48
CSNK1E-207ENST00000430335 TOP2AP11388 1531 aaKnown RBP36.48■■■■□ 3.43
CSNK1E-207ENST00000430335 SUPT5HO00267 1087 aaKnown RBP36.14■■■■□ 3.38
CSNK1E-207ENST00000430335 NESP48681 1621 aa36.1■■■■□ 3.37
CSNK1E-207ENST00000430335 LAMC3Q9Y6N6 1575 aa36.09■■■■□ 3.37
CSNK1E-207ENST00000430335 CADPSQ9ULU8 1353 aa36.08■■■■□ 3.37
CSNK1E-207ENST00000430335 CCDC88BA6NC98 1476 aa36.05■■■■□ 3.36
CSNK1E-207ENST00000430335 CFTRP13569 1480 aa35.92■■■■□ 3.34
CSNK1E-207ENST00000430335 ERCC6Q03468 1493 aa35.87■■■■□ 3.33
CSNK1E-207ENST00000430335 PDS5BQ9NTI5 1447 aa35.87■■■■□ 3.33
CSNK1E-207ENST00000430335 KIF21AQ7Z4S6 1674 aa35.64■■■■□ 3.3
CSNK1E-207ENST00000430335 FANCD2Q9BXW9 1451 aa35.63■■■■□ 3.29
CSNK1E-207ENST00000430335 CEP164Q9UPV0 1460 aa35.55■■■■□ 3.28
CSNK1E-207ENST00000430335 PRDM2Q13029 1718 aa35.55■■■■□ 3.28
CSNK1E-207ENST00000430335 THOC2Q8NI27 1593 aaKnown RBP35.51■■■■□ 3.27
CSNK1E-207ENST00000430335 MRC2Q9UBG0 1479 aa35.46■■■■□ 3.27
CSNK1E-207ENST00000430335 CUX2O14529 1486 aa35.45■■■■□ 3.27
CSNK1E-207ENST00000430335 WDR62O43379 1518 aa35.33■■■■□ 3.25
CSNK1E-207ENST00000430335 URB2Q14146 1524 aaKnown RBP35.25■■■■□ 3.23
CSNK1E-207ENST00000430335 ABCC8Q09428 1581 aa35.14■■■■□ 3.22
CSNK1E-207ENST00000430335 TOPBP1Q92547 1522 aa35.09■■■■□ 3.21
CSNK1E-207ENST00000430335 DNMBPQ6XZF7 1577 aa35.07■■■■□ 3.2
CSNK1E-207ENST00000430335 CUX1P39880 1505 aa34.91■■■■□ 3.18
CSNK1E-207ENST00000430335 IFT140Q96RY7 1462 aa34.83■■■■□ 3.17
CSNK1E-207ENST00000430335 POLA1P09884 1462 aaPredicted RBP34.82■■■■□ 3.16
CSNK1E-207ENST00000430335 WRNQ14191 1432 aaPredicted RBP eCLIP34.81■■■■□ 3.16
CSNK1E-207ENST00000430335 FGD5Q6ZNL6 1462 aa34.75■■■■□ 3.15
CSNK1E-207ENST00000430335 TOP2BQ02880 1626 aa34.69■■■■□ 3.14
CSNK1E-207ENST00000430335 SOGA1O94964 1423 aa34.68■■■■□ 3.14
CSNK1E-207ENST00000430335 TARBP1Q13395 1621 aaKnown RBP34.66■■■■□ 3.14
CSNK1E-207ENST00000430335 BIVM-ERCC5R4GMW8 1640 aa34.66■■■■□ 3.14
CSNK1E-207ENST00000430335 SYNJ1O43426 1573 aa34.66■■■■□ 3.14
CSNK1E-207ENST00000430335 RAD54L2Q9Y4B4 1467 aa34.64■■■■□ 3.14
CSNK1E-207ENST00000430335 ZNF608Q9ULD9 1512 aaPredicted RBP34.6■■■■□ 3.13
CSNK1E-207ENST00000430335 ABCA10Q8WWZ4 1543 aa34.46■■■■□ 3.11
CSNK1E-207ENST00000430335 EIF4G3O43432 1585 aaKnown RBP34.46■■■■□ 3.11
CSNK1E-207ENST00000430335 WDR97A6NE52 1622 aa34.46■■■■□ 3.11
CSNK1E-207ENST00000430335 AQRO60306 1485 aaKnown RBP eCLIP34.46■■■■□ 3.111e-6■■□□□ 13.8
CSNK1E-207ENST00000430335 TDRD9Q8NDG6 1382 aaKnown RBP34.44■■■■□ 3.1
CSNK1E-207ENST00000430335 GAPVD1Q14C86 1478 aa34.28■■■■□ 3.08
CSNK1E-207ENST00000430335 GRIN2BQ13224 1484 aa34.26■■■■□ 3.07
CSNK1E-207ENST00000430335 ABCA5Q8WWZ7 1642 aa34.26■■■■□ 3.07
CSNK1E-207ENST00000430335 TRIM41Q8WV44 630 aa34.15■■■■□ 3.06
CSNK1E-207ENST00000430335 SNAPC4Q5SXM2 1469 aa34.14■■■■□ 3.06
CSNK1E-207ENST00000430335 MAGI1Q96QZ7 1491 aaPredicted RBP34.14■■■■□ 3.06
CSNK1E-207ENST00000430335 PBRM1Q86U86 1689 aa34.11■■■■□ 3.05
CSNK1E-207ENST00000430335 KIF27Q86VH2 1401 aa34.07■■■■□ 3.04
CSNK1E-207ENST00000430335 DNAJC5Q9H3Z4 198 aa34.06■■■■□ 3.04
CSNK1E-207ENST00000430335 ERICH3Q5RHP9 1530 aa34.05■■■■□ 3.04
CSNK1E-207ENST00000430335 OSCARQ8IYS5 282 aa34.03■■■■□ 3.04
CSNK1E-207ENST00000430335 SYNJ2O15056 1496 aa34■■■■□ 3.03
CSNK1E-207ENST00000430335 FBLN2P98095 1184 aa33.96■■■■□ 3.03
CSNK1E-207ENST00000430335 CHMP7Q8WUX9 453 aaPredicted RBP33.96■■■■□ 3.03
CSNK1E-207ENST00000430335 CHD1O14646 1710 aa33.93■■■■□ 3.02
CSNK1E-207ENST00000430335 CHIC1Q5VXU3 224 aa33.93■■■■□ 3.02
CSNK1E-207ENST00000430335 FHAD1B1AJZ9 1412 aa33.92■■■■□ 3.02
CSNK1E-207ENST00000430335 ADAMTS12P58397 1594 aa33.91■■■■□ 3.02
CSNK1E-207ENST00000430335 IGF1RP08069 1367 aa33.91■■■■□ 3.02
CSNK1E-207ENST00000430335 GRIN2AQ12879 1464 aa33.8■■■■□ 3
CSNK1E-207ENST00000430335 RUSC2Q8N2Y8 1516 aa33.79■■■■□ 3
CSNK1E-207ENST00000430335 CUL7Q14999 1698 aa33.76■■■□□ 2.99
CSNK1E-207ENST00000430335 CARMIL1Q5VZK9 1371 aa33.71■■■□□ 2.99
CSNK1E-207ENST00000430335 NUP160Q12769 1436 aa33.67■■■□□ 2.98
CSNK1E-207ENST00000430335 CLASP1Q7Z460 1538 aa33.65■■■□□ 2.98
CSNK1E-207ENST00000430335 EEA1Q15075 1411 aa33.62■■■□□ 2.97
CSNK1E-207ENST00000430335 CEP170Q5SW79 1584 aa33.6■■■□□ 2.97
CSNK1E-207ENST00000430335 RAPGEF2Q9Y4G8 1499 aa33.53■■■□□ 2.96
CSNK1E-207ENST00000430335 CSRNP3Q8WYN3 585 aa33.52■■■□□ 2.96
CSNK1E-207ENST00000430335 PRXQ9BXM0 1461 aa33.5■■■□□ 2.95
CSNK1E-207ENST00000430335 ARHGEF11O15085 1522 aa33.44■■■□□ 2.94
CSNK1E-207ENST00000430335 KIAA0586Q9BVV6 1533 aa33.41■■■□□ 2.94
CSNK1E-207ENST00000430335 RIMBP3CA6NJZ7 1639 aa33.39■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 591.3 ms