RNA–Protein interactions for RNA: ENST00000429909.5

EFEMP1-205, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

TSL 4

Gene EFEMP1, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-205ENST00000429909 NISCHQ9Y2I1 1504 aa33.06■■■□□ 2.88
EFEMP1-205ENST00000429909 CCDC180Q9P1Z9 1646 aa29.25■■■□□ 2.27
EFEMP1-205ENST00000429909 ABCC9O60706 1549 aa28.45■■■□□ 2.15
EFEMP1-205ENST00000429909 DCAF8L2P0C7V8 631 aa27.74■■■□□ 2.03
EFEMP1-205ENST00000429909 ZCCHC6Q5VYS8 1495 aaKnown RBP27.56■■■□□ 2
EFEMP1-205ENST00000429909 NACADO15069 1562 aa27.48■■□□□ 1.99
EFEMP1-205ENST00000429909 RB1CC1Q8TDY2 1594 aa27.47■■□□□ 1.99
EFEMP1-205ENST00000429909 MYO15BQ96JP2 1530 aa27.36■■□□□ 1.97
EFEMP1-205ENST00000429909 DCAF1Q9Y4B6 1507 aa27.34■■□□□ 1.97
EFEMP1-205ENST00000429909 UNC13AQ9UPW8 1703 aa26.78■■□□□ 1.88
EFEMP1-205ENST00000429909 SCRIBQ14160 1630 aa26.75■■□□□ 1.87
EFEMP1-205ENST00000429909 PABPN1Q86U42 306 aaKnown RBP eCLIP26.69■■□□□ 1.86
EFEMP1-205ENST00000429909 BICRAQ9NZM4 1560 aa26.54■■□□□ 1.84
EFEMP1-205ENST00000429909 SHROOM4Q9ULL8 1493 aa26.36■■□□□ 1.81
EFEMP1-205ENST00000429909 DNAJC5BQ9UF47 199 aa25.87■■□□□ 1.73
EFEMP1-205ENST00000429909 EIF4G1Q04637 1599 aaKnown RBP25.86■■□□□ 1.73
EFEMP1-205ENST00000429909 CECR2Q9BXF3 1484 aa25.72■■□□□ 1.71
EFEMP1-205ENST00000429909 CC2D2AQ9P2K1 1620 aa25.7■■□□□ 1.71
EFEMP1-205ENST00000429909 BAZ1AQ9NRL2 1556 aaPredicted RBP25.62■■□□□ 1.69
EFEMP1-205ENST00000429909 SMARCA4P51532 1647 aa25.59■■□□□ 1.69
EFEMP1-205ENST00000429909 MROH2BQ7Z745 1585 aa25.48■■□□□ 1.67
EFEMP1-205ENST00000429909 ATAD2BQ9ULI0 1458 aa25.4■■□□□ 1.66
EFEMP1-205ENST00000429909 SMARCA2P51531 1590 aa25.4■■□□□ 1.66
EFEMP1-205ENST00000429909 NCAPD3P42695 1498 aa25.35■■□□□ 1.65
EFEMP1-205ENST00000429909 RSF1Q96T23 1441 aaPredicted RBP25.3■■□□□ 1.64
EFEMP1-205ENST00000429909 PEG3Q9GZU2 1588 aa25.3■■□□□ 1.64
EFEMP1-205ENST00000429909 BAZ1BQ9UIG0 1483 aaKnown RBP25.24■■□□□ 1.63
EFEMP1-205ENST00000429909 WIZO95785 1651 aa25.23■■□□□ 1.63
EFEMP1-205ENST00000429909 HMGXB3Q12766 1538 aa25.22■■□□□ 1.63
EFEMP1-205ENST00000429909 SUPT5HO00267 1087 aaKnown RBP25■■□□□ 1.59
EFEMP1-205ENST00000429909 TOP2AP11388 1531 aaKnown RBP24.96■■□□□ 1.59
EFEMP1-205ENST00000429909 CCDC88BA6NC98 1476 aa24.7■■□□□ 1.55
EFEMP1-205ENST00000429909 CADPSQ9ULU8 1353 aa24.67■■□□□ 1.54
EFEMP1-205ENST00000429909 NESP48681 1621 aa24.66■■□□□ 1.54
EFEMP1-205ENST00000429909 LAMC3Q9Y6N6 1575 aa24.65■■□□□ 1.54
EFEMP1-205ENST00000429909 ERCC6Q03468 1493 aa24.54■■□□□ 1.52
EFEMP1-205ENST00000429909 PDS5BQ9NTI5 1447 aa24.53■■□□□ 1.52
EFEMP1-205ENST00000429909 CFTRP13569 1480 aa24.52■■□□□ 1.52
EFEMP1-205ENST00000429909 FANCD2Q9BXW9 1451 aa24.37■■□□□ 1.49
EFEMP1-205ENST00000429909 KIF21AQ7Z4S6 1674 aa24.36■■□□□ 1.49
EFEMP1-205ENST00000429909 PRDM2Q13029 1718 aa24.34■■□□□ 1.49
EFEMP1-205ENST00000429909 CEP164Q9UPV0 1460 aa24.32■■□□□ 1.48
EFEMP1-205ENST00000429909 MRC2Q9UBG0 1479 aa24.21■■□□□ 1.47
EFEMP1-205ENST00000429909 THOC2Q8NI27 1593 aaKnown RBP24.17■■□□□ 1.46
EFEMP1-205ENST00000429909 CUX2O14529 1486 aa24.13■■□□□ 1.45
EFEMP1-205ENST00000429909 WDR62O43379 1518 aa24.08■■□□□ 1.45
EFEMP1-205ENST00000429909 URB2Q14146 1524 aaKnown RBP24.07■■□□□ 1.44
EFEMP1-205ENST00000429909 ABCC8Q09428 1581 aa24.06■■□□□ 1.44
EFEMP1-205ENST00000429909 TOPBP1Q92547 1522 aa23.99■■□□□ 1.43
EFEMP1-205ENST00000429909 DNMBPQ6XZF7 1577 aa23.98■■□□□ 1.43
EFEMP1-205ENST00000429909 WRNQ14191 1432 aaPredicted RBP eCLIP23.88■■□□□ 1.41
EFEMP1-205ENST00000429909 CUX1P39880 1505 aa23.88■■□□□ 1.41
EFEMP1-205ENST00000429909 IFT140Q96RY7 1462 aa23.81■■□□□ 1.4
EFEMP1-205ENST00000429909 POLA1P09884 1462 aaPredicted RBP23.79■■□□□ 1.4
EFEMP1-205ENST00000429909 FGD5Q6ZNL6 1462 aa23.79■■□□□ 1.4
EFEMP1-205ENST00000429909 SOGA1O94964 1423 aa23.77■■□□□ 1.4
EFEMP1-205ENST00000429909 TOP2BQ02880 1626 aa23.75■■□□□ 1.39
EFEMP1-205ENST00000429909 SYNJ1O43426 1573 aa23.74■■□□□ 1.39
EFEMP1-205ENST00000429909 BIVM-ERCC5R4GMW8 1640 aa23.73■■□□□ 1.39
EFEMP1-205ENST00000429909 RAD54L2Q9Y4B4 1467 aa23.71■■□□□ 1.39
EFEMP1-205ENST00000429909 TARBP1Q13395 1621 aaKnown RBP23.67■■□□□ 1.38
EFEMP1-205ENST00000429909 ZNF608Q9ULD9 1512 aaPredicted RBP23.63■■□□□ 1.37
EFEMP1-205ENST00000429909 TRIM41Q8WV44 630 aa23.61■■□□□ 1.37
EFEMP1-205ENST00000429909 TDRD9Q8NDG6 1382 aaKnown RBP23.6■■□□□ 1.37
EFEMP1-205ENST00000429909 AQRO60306 1485 aaKnown RBP eCLIP23.58■■□□□ 1.37
EFEMP1-205ENST00000429909 ABCA10Q8WWZ4 1543 aa23.56■■□□□ 1.36
EFEMP1-205ENST00000429909 EIF4G3O43432 1585 aaKnown RBP23.52■■□□□ 1.36
EFEMP1-205ENST00000429909 WDR97A6NE52 1622 aa23.51■■□□□ 1.35
EFEMP1-205ENST00000429909 GAPVD1Q14C86 1478 aa23.48■■□□□ 1.35
EFEMP1-205ENST00000429909 GRIN2BQ13224 1484 aa23.43■■□□□ 1.34
EFEMP1-205ENST00000429909 CHIC1Q5VXU3 224 aa23.43■■□□□ 1.34
EFEMP1-205ENST00000429909 ABCA5Q8WWZ7 1642 aa23.4■■□□□ 1.34
EFEMP1-205ENST00000429909 KIF27Q86VH2 1401 aa23.39■■□□□ 1.33
EFEMP1-205ENST00000429909 PBRM1Q86U86 1689 aa23.36■■□□□ 1.33
EFEMP1-205ENST00000429909 FBLN2P98095 1184 aa23.36■■□□□ 1.33
EFEMP1-205ENST00000429909 SNAPC4Q5SXM2 1469 aa23.34■■□□□ 1.33
EFEMP1-205ENST00000429909 CHMP7Q8WUX9 453 aaPredicted RBP23.33■■□□□ 1.33
EFEMP1-205ENST00000429909 MAGI1Q96QZ7 1491 aaPredicted RBP23.32■■□□□ 1.32
EFEMP1-205ENST00000429909 OSCARQ8IYS5 282 aa23.3■■□□□ 1.32
EFEMP1-205ENST00000429909 ERICH3Q5RHP9 1530 aa23.29■■□□□ 1.32
EFEMP1-205ENST00000429909 IGF1RP08069 1367 aa23.24■■□□□ 1.31
EFEMP1-205ENST00000429909 SYNJ2O15056 1496 aa23.24■■□□□ 1.31
EFEMP1-205ENST00000429909 FHAD1B1AJZ9 1412 aa23.22■■□□□ 1.31
EFEMP1-205ENST00000429909 CHD1O14646 1710 aa23.21■■□□□ 1.31
EFEMP1-205ENST00000429909 RUSC2Q8N2Y8 1516 aa23.2■■□□□ 1.3
EFEMP1-205ENST00000429909 ADAMTS12P58397 1594 aa23.17■■□□□ 1.3
EFEMP1-205ENST00000429909 DNAJC5Q9H3Z4 198 aa23.15■■□□□ 1.3
EFEMP1-205ENST00000429909 CARMIL1Q5VZK9 1371 aa23.14■■□□□ 1.3
EFEMP1-205ENST00000429909 CUL7Q14999 1698 aa23.13■■□□□ 1.29
EFEMP1-205ENST00000429909 FAM9AQ8IZU1 332 aaPredicted RBP23.12■■□□□ 1.29
EFEMP1-205ENST00000429909 EEA1Q15075 1411 aa23.11■■□□□ 1.29
EFEMP1-205ENST00000429909 CSRNP3Q8WYN3 585 aa23.11■■□□□ 1.29
EFEMP1-205ENST00000429909 GRIN2AQ12879 1464 aa23.11■■□□□ 1.29
EFEMP1-205ENST00000429909 RAPGEF2Q9Y4G8 1499 aa23■■□□□ 1.27
EFEMP1-205ENST00000429909 NUP160Q12769 1436 aa22.97■■□□□ 1.27
EFEMP1-205ENST00000429909 CEP170Q5SW79 1584 aa22.95■■□□□ 1.26
EFEMP1-205ENST00000429909 PRXQ9BXM0 1461 aa22.93■■□□□ 1.26
EFEMP1-205ENST00000429909 CLASP1Q7Z460 1538 aa22.92■■□□□ 1.26
EFEMP1-205ENST00000429909 JPH4Q96JJ6 628 aa22.86■■□□□ 1.25
EFEMP1-205ENST00000429909 KIAA0586Q9BVV6 1533 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms