RNA–Protein interactions for RNA: ENST00000428939.3

HOTAIRM1-202, Transcript of HOXA transcript antisense RNA, myeloid-specific 1, humanhuman

TSL 2 BASIC

Gene HOTAIRM1, Length 889 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOTAIRM1-202ENST00000428939 NISCHQ9Y2I1 1504 aa27.72■■■□□ 2.03
HOTAIRM1-202ENST00000428939 AEBP2Q6ZN18 517 aaPredicted RBP26.29■■□□□ 1.8
HOTAIRM1-202ENST00000428939 CHIC1Q5VXU3 224 aa25.15■■□□□ 1.62
HOTAIRM1-202ENST00000428939 CCDC180Q9P1Z9 1646 aa24.24■■□□□ 1.47
HOTAIRM1-202ENST00000428939 ZCCHC6Q5VYS8 1495 aaKnown RBP23.26■■□□□ 1.31
HOTAIRM1-202ENST00000428939 ABCC9O60706 1549 aa23.14■■□□□ 1.3
HOTAIRM1-202ENST00000428939 DCAF8L2P0C7V8 631 aa22.99■■□□□ 1.27
HOTAIRM1-202ENST00000428939 DCAF1Q9Y4B6 1507 aa22.95■■□□□ 1.26
HOTAIRM1-202ENST00000428939 MYO15BQ96JP2 1530 aa22.77■■□□□ 1.24
HOTAIRM1-202ENST00000428939 NACADO15069 1562 aa22.68■■□□□ 1.22
HOTAIRM1-202ENST00000428939 RB1CC1Q8TDY2 1594 aa22.53■■□□□ 1.2
HOTAIRM1-202ENST00000428939 SHROOM4Q9ULL8 1493 aa22.47■■□□□ 1.19
HOTAIRM1-202ENST00000428939 SENP3Q9H4L4 574 aaPredicted RBP22.35■■□□□ 1.17
HOTAIRM1-202ENST00000428939 SCRIBQ14160 1630 aa22.27■■□□□ 1.16
HOTAIRM1-202ENST00000428939 PHF23Q9BUL5 403 aaPredicted RBP22.14■■□□□ 1.13
HOTAIRM1-202ENST00000428939 UNC13AQ9UPW8 1703 aa21.9■■□□□ 1.1
HOTAIRM1-202ENST00000428939 PABPN1Q86U42 306 aaKnown RBP eCLIP21.79■■□□□ 1.08
HOTAIRM1-202ENST00000428939 BICRAQ9NZM4 1560 aa21.78■■□□□ 1.08
HOTAIRM1-202ENST00000428939 CECR2Q9BXF3 1484 aa21.53■■□□□ 1.04
HOTAIRM1-202ENST00000428939 SUPT5HO00267 1087 aaKnown RBP21.53■■□□□ 1.04
HOTAIRM1-202ENST00000428939 BAZ1AQ9NRL2 1556 aaPredicted RBP21.44■■□□□ 1.02
HOTAIRM1-202ENST00000428939 RSF1Q96T23 1441 aaPredicted RBP21.44■■□□□ 1.02
HOTAIRM1-202ENST00000428939 MROH2BQ7Z745 1585 aa21.4■■□□□ 1.02
HOTAIRM1-202ENST00000428939 SMARCA4P51532 1647 aa21.33■■□□□ 1.01
HOTAIRM1-202ENST00000428939 EIF4G1Q04637 1599 aaKnown RBP21.19■□□□□ 0.98
HOTAIRM1-202ENST00000428939 WIZO95785 1651 aa21.16■□□□□ 0.98
HOTAIRM1-202ENST00000428939 PEG3Q9GZU2 1588 aa21.09■□□□□ 0.97
HOTAIRM1-202ENST00000428939 ATAD2BQ9ULI0 1458 aa21.07■□□□□ 0.96
HOTAIRM1-202ENST00000428939 SMARCA2P51531 1590 aa21.06■□□□□ 0.96
HOTAIRM1-202ENST00000428939 TOP2AP11388 1531 aaKnown RBP21.02■□□□□ 0.96
HOTAIRM1-202ENST00000428939 BAZ1BQ9UIG0 1483 aaKnown RBP20.95■□□□□ 0.94
HOTAIRM1-202ENST00000428939 NCAPD3P42695 1498 aa20.94■□□□□ 0.94
HOTAIRM1-202ENST00000428939 CC2D2AQ9P2K1 1620 aa20.9■□□□□ 0.94
HOTAIRM1-202ENST00000428939 HMGXB3Q12766 1538 aa20.88■□□□□ 0.93
HOTAIRM1-202ENST00000428939 FOXD1Q16676 465 aa20.85■□□□□ 0.93
HOTAIRM1-202ENST00000428939 CCDC88BA6NC98 1476 aa20.78■□□□□ 0.92
HOTAIRM1-202ENST00000428939 DNAJC5BQ9UF47 199 aa20.55■□□□□ 0.88
HOTAIRM1-202ENST00000428939 CFTRP13569 1480 aa20.41■□□□□ 0.86
HOTAIRM1-202ENST00000428939 CADPSQ9ULU8 1353 aa20.4■□□□□ 0.86
HOTAIRM1-202ENST00000428939 TRIM41Q8WV44 630 aa20.29■□□□□ 0.84
HOTAIRM1-202ENST00000428939 LAMC3Q9Y6N6 1575 aa20.25■□□□□ 0.83
HOTAIRM1-202ENST00000428939 ABCC8Q09428 1581 aa20.24■□□□□ 0.83
HOTAIRM1-202ENST00000428939 NESP48681 1621 aa20.22■□□□□ 0.83
HOTAIRM1-202ENST00000428939 WRNQ14191 1432 aaPredicted RBP eCLIP20.21■□□□□ 0.83
HOTAIRM1-202ENST00000428939 PLPPR3Q6T4P5 718 aa20.2■□□□□ 0.82
HOTAIRM1-202ENST00000428939 PRDM2Q13029 1718 aa20.18■□□□□ 0.82
HOTAIRM1-202ENST00000428939 FANCD2Q9BXW9 1451 aa20.16■□□□□ 0.82
HOTAIRM1-202ENST00000428939 PDS5BQ9NTI5 1447 aa20.15■□□□□ 0.82
HOTAIRM1-202ENST00000428939 CEP164Q9UPV0 1460 aa20.07■□□□□ 0.8
HOTAIRM1-202ENST00000428939 SYNJ1O43426 1573 aa20.07■□□□□ 0.8
HOTAIRM1-202ENST00000428939 CUX1P39880 1505 aa20.02■□□□□ 0.8
HOTAIRM1-202ENST00000428939 TOP2BQ02880 1626 aa20.02■□□□□ 0.8
HOTAIRM1-202ENST00000428939 BIVM-ERCC5R4GMW8 1640 aa19.98■□□□□ 0.79
HOTAIRM1-202ENST00000428939 DNMBPQ6XZF7 1577 aa19.93■□□□□ 0.78
HOTAIRM1-202ENST00000428939 KIF21AQ7Z4S6 1674 aa19.91■□□□□ 0.78
HOTAIRM1-202ENST00000428939 ERCC6Q03468 1493 aa19.91■□□□□ 0.78
HOTAIRM1-202ENST00000428939 TOPBP1Q92547 1522 aa19.91■□□□□ 0.78
HOTAIRM1-202ENST00000428939 URB2Q14146 1524 aaKnown RBP19.89■□□□□ 0.77
HOTAIRM1-202ENST00000428939 MRC2Q9UBG0 1479 aa19.88■□□□□ 0.77
HOTAIRM1-202ENST00000428939 FAM9AQ8IZU1 332 aaPredicted RBP19.88■□□□□ 0.77
HOTAIRM1-202ENST00000428939 FGD5Q6ZNL6 1462 aa19.86■□□□□ 0.77
HOTAIRM1-202ENST00000428939 EEA1Q15075 1411 aa19.85■□□□□ 0.77
HOTAIRM1-202ENST00000428939 SOGA1O94964 1423 aa19.85■□□□□ 0.77
HOTAIRM1-202ENST00000428939 POLA1P09884 1462 aaPredicted RBP19.79■□□□□ 0.76
HOTAIRM1-202ENST00000428939 WDR62O43379 1518 aa19.76■□□□□ 0.75
HOTAIRM1-202ENST00000428939 RUSC2Q8N2Y8 1516 aa19.76■□□□□ 0.75
HOTAIRM1-202ENST00000428939 CSRNP3Q8WYN3 585 aa19.74■□□□□ 0.75
HOTAIRM1-202ENST00000428939 KIF27Q86VH2 1401 aa19.74■□□□□ 0.75
HOTAIRM1-202ENST00000428939 CUX2O14529 1486 aa19.72■□□□□ 0.75
HOTAIRM1-202ENST00000428939 RAD54L2Q9Y4B4 1467 aa19.71■□□□□ 0.75
HOTAIRM1-202ENST00000428939 THOC2Q8NI27 1593 aaKnown RBP19.7■□□□□ 0.74
HOTAIRM1-202ENST00000428939 PPP6R1Q9UPN7 881 aa19.69■□□□□ 0.74
HOTAIRM1-202ENST00000428939 ABCA10Q8WWZ4 1543 aa19.69■□□□□ 0.74
HOTAIRM1-202ENST00000428939 LOC105371045A0A1W2PR82 267 aa19.67■□□□□ 0.74
HOTAIRM1-202ENST00000428939 ADRA2BP18089 450 aa19.67■□□□□ 0.74
HOTAIRM1-202ENST00000428939 IFT140Q96RY7 1462 aa19.62■□□□□ 0.73
HOTAIRM1-202ENST00000428939 EHMT2Q96KQ7 1210 aa19.59■□□□□ 0.73
HOTAIRM1-202ENST00000428939 TARBP1Q13395 1621 aaKnown RBP19.58■□□□□ 0.72
HOTAIRM1-202ENST00000428939 WDR97A6NE52 1622 aa19.56■□□□□ 0.72
HOTAIRM1-202ENST00000428939 PIAS4Q8N2W9 510 aaPredicted RBP19.56■□□□□ 0.72
HOTAIRM1-202ENST00000428939 TDRD9Q8NDG6 1382 aaKnown RBP19.56■□□□□ 0.72
HOTAIRM1-202ENST00000428939 IGF1RP08069 1367 aa19.55■□□□□ 0.72
HOTAIRM1-202ENST00000428939 GOLGA3Q08378 1498 aa19.54■□□□□ 0.72
HOTAIRM1-202ENST00000428939 KIF21BO75037 1637 aa19.53■□□□□ 0.72
HOTAIRM1-202ENST00000428939 GAPVD1Q14C86 1478 aa19.53■□□□□ 0.72
HOTAIRM1-202ENST00000428939 PRXQ9BXM0 1461 aa19.52■□□□□ 0.72
HOTAIRM1-202ENST00000428939 ABCA5Q8WWZ7 1642 aa19.51■□□□□ 0.71
HOTAIRM1-202ENST00000428939 CARMIL1Q5VZK9 1371 aa19.47■□□□□ 0.71
HOTAIRM1-202ENST00000428939 UBTFP17480 764 aaKnown RBP19.47■□□□□ 0.71
HOTAIRM1-202ENST00000428939 ERICH3Q5RHP9 1530 aa19.46■□□□□ 0.71
HOTAIRM1-202ENST00000428939 AQRO60306 1485 aaKnown RBP eCLIP19.46■□□□□ 0.71
HOTAIRM1-202ENST00000428939 RAPGEF2Q9Y4G8 1499 aa19.46■□□□□ 0.71
HOTAIRM1-202ENST00000428939 ZNF608Q9ULD9 1512 aaPredicted RBP19.45■□□□□ 0.7
HOTAIRM1-202ENST00000428939 TNIKQ9UKE5 1360 aa19.44■□□□□ 0.7
HOTAIRM1-202ENST00000428939 GRIN2BQ13224 1484 aa19.41■□□□□ 0.7
HOTAIRM1-202ENST00000428939 CUL7Q14999 1698 aa19.4■□□□□ 0.7
HOTAIRM1-202ENST00000428939 MSH5O43196 834 aa19.38■□□□□ 0.69
HOTAIRM1-202ENST00000428939 EIF4G3O43432 1585 aaKnown RBP19.37■□□□□ 0.69
HOTAIRM1-202ENST00000428939 PBRM1Q86U86 1689 aa19.34■□□□□ 0.69
HOTAIRM1-202ENST00000428939 FHAD1B1AJZ9 1412 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms